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Fungi in cancer

Both the gut and the tumour microbiome are now established as crucial regulators of cancer phenotypes and have been implicated in cancer initiation, progression and therapy response. Although the role of bacteria in these processes is beginning to be unravelled, the relevance of fungi is only just emerging. In this Viewpoint, we asked experts to discuss the current knowledge on the mycobiome–cancer connection and share their opinion on how to best solve open questions.

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References

  1. Narunsky-Haziza, L. et al. Pan-cancer analyses reveal cancer-type-specific fungal ecologies and bacteriome interactions. Cell 185, 3789–3806.e17 (2022).

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  2. Dohlman, A. B. et al. A pan-cancer mycobiome analysis reveals fungal involvement in gastrointestinal and lung tumors. Cell 185, 3807–3822.e12 (2022).

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  3. Liu, N. N. et al. Multi-kingdom microbiota analyses identify bacterial-fungal interactions and biomarkers of colorectal cancer across cohorts. Nat. Microbiol. 7, 238–250 (2022).

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  4. Riquelme, E. et al. Tumor microbiome diversity and composition influence pancreatic cancer outcomes. Cell 178, 795–806.e12 (2019).

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  5. Banerjee, S. et al. Prognostic correlations with the microbiome of breast cancer subtypes. Cell Death Dis. 12, 831 (2021).

    Article  PubMed  PubMed Central  Google Scholar 

  6. Aykut, B. et al. The fungal mycobiome promotes pancreatic oncogenesis via activation of MBL. Nature 574, 264–267 (2019).

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  7. Nejman, D. et al. The human tumor microbiome is composed of tumor type-specific intracellular bacteria. Science 368, 973–980 (2020).

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  8. Zhu, Q. et al. AHR mediates the aflatoxin B1 toxicity associated with hepatocellular carcinoma. Signal. Transduct. Target. Ther. 6, 299 (2021).

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  9. Vadovics, M. et al. Candida albicans enhances the progression of oral squamous cell carcinoma in vitro and in vivo. mBio 13, e0314421 (2021).

    Article  PubMed  Google Scholar 

  10. Alam, A. et al. Fungal mycobiome drives IL-33 secretion and type 2 immunity in pancreatic cancer. Cancer Cell 40, 153–167.e11 (2022).

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  11. Li, X. V. et al. Immune regulation by fungal strain diversity in inflammatory bowel disease. Nature 603, 672–678 (2022).

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  12. Yoon, T. J. et al. Anti-tumor metastatic activity of beta-glucan purified from mutated Saccharomyces cerevisiae. Int. Immunopharmacol. 8, 36–42 (2008).

    Article  CAS  PubMed  Google Scholar 

  13. Gao, R. et al. Dysbiosis signature of mycobiota in colon polyp and colorectal cancer. Eur. J. Clin. Microbiol. Infect. Dis. 36, 2457–2468 (2017).

    Article  CAS  PubMed  Google Scholar 

  14. Richard, M. L. et al. Mucosa-associated microbiota dysbiosis in colitis associated cancer. Gut Microbes 9, 131–142 (2017).

    Article  PubMed  PubMed Central  Google Scholar 

  15. Zhu, Y. et al. Fungal-induced glycolysis in macrophages promotes colon cancer by enhancing innate lymphoid cell secretion of IL-22. EMBO J. 40, e105320 (2021).

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  16. Zhong, M. et al. Candida albicans disorder is associated with gastric carcinogenesis. Theranostics 11, 4945–4956 (2021).

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  17. Zhang, L. et al. Characterization of the intestinal fungal microbiome in patients with hepatocellular carcinoma. J. Transl. Med. 21, 126 (2023).

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  18. Shiao, S. L. et al. Commensal bacteria and fungi differentially regulate tumor responses to radiation therapy. Cancer Cell 39, 1202–1213.e6 (2021).

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  19. Riquelme, E. & McAllister, F. Bacteria and fungi: The counteracting modulators of immune responses to radiation therapy in cancer. Cancer Cell 39, 1173–1175 (2021).

    Article  CAS  PubMed  Google Scholar 

  20. Gihawi, A. et al. Major data analysis errors invalidate cancer microbiome findings. mBio 14, e0160723 (2023).

    Article  PubMed  Google Scholar 

  21. Sepich-Poore G. D. et al. Reply to: caution regarding the specificities of pan-cancer microbial structure. Preprint at bioRxiv https://doi.org/10.1101/2023.02.10.528049 (2023).

  22. Lapiere, A. & Richard, M. L. Bacterial-fungal metabolic interactions within the microbiota and their potential relevance in human health and disease: a short review. Gut Microbes 14, 2105610 (2022).

    Article  PubMed  PubMed Central  Google Scholar 

  23. Nogueira, F., Sharghi, S., Kuchler, K. & Lion, T. Pathogenetic impact of bacterial-fungal interactions. Microorganisms 7, 459 (2019).

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  24. Santus, W., Devlin, J. R. & Behnsen, J. Crossing kingdoms: how the mycobiota and fungal-bacterial interactions impact host health and disease. Infect. Immun. 89, e00648-20 (2021).

    Article  PubMed  PubMed Central  Google Scholar 

  25. Shekarian, T. et al. Pattern recognition receptors: immune targets to enhance cancer immunotherapy. Ann. Oncol. 28, 1756–1766 (2017).

    Article  CAS  PubMed  Google Scholar 

  26. Zhai, B. et al. High-resolution mycobiota analysis reveals dynamic intestinal translocation preceding invasive candidiasis. Nat. Med. 26, 59–64 (2020).

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  27. Kusakabe, T. et al. Fungal microbiota sustains lasting immune activation of neutrophils and their progenitors in severe COVID-19. Nat. Immunol. 24, 1879–1889 (2023).

    Article  CAS  PubMed  Google Scholar 

  28. Fan, D. et al. Activation of HIF-1α and LL-37 by commensal bacteria inhibits Candida albicans colonization. Nat. Med. 21, 808–814 (2015).

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  29. Yoon, S. Y., Park, S. J. & Park, Y. J. The anticancer properties of cordycepin and their underlying mechanisms. Int. J. Mol. Sci. 19, 3027 (2018).

    Article  PubMed  PubMed Central  Google Scholar 

  30. Fletcher, A. A., Kelly, M. S., Eckhoff, A. M. & Allen, P. J. Revisiting the intrinsic mycobiome in pancreatic cancer. Nature 620, E1–E6 (2023).

    Article  CAS  PubMed  Google Scholar 

Download references

Acknowledgements

J.G.-P. is supported by a National Institute of Allergy and Infectious Diseases (NIAID) award (K01AI143881). I.D.I. is supported by National Institute of Health (NIH) grants (DK113136, DK121977, AI163007) and the Leona M. and Harry B. Helmsley Charitable Trust and is an Irma T. Hirschl Career Scientist, a Burrough Welcome Trust PATH fellow, a CIFAR program Fungal Kingdom: Threats and Opportunities fellow and a Cancer Research Institute Lloyd J. Old STAR fellow.

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Correspondence to Jessica Galloway-Peña, Iliyan D. Iliev or Florencia McAllister.

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Competing interests

J.G.-P. declares no competing interests. I.D.I. holds a provisional patent application in a cancer-related area. F.M. is a member of the scientific advisory board at Neologics Bio and is an inventor on a US patent application (PCT/US2020/026102) submitted by the University of Texas MD Anderson Cancer Center.

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The contributors

Jessica Galloway-Peña is an assistant professor in the College of Veterinary Medicine and Biomedical Sciences at Texas A&M University and a faculty member of the Interdisciplinary Graduate Program in Genetics and Genomics. She additionally holds an adjunct position in Genomic Medicine at MD Anderson Cancer Center. Her research focuses on the mechanisms by which the microbiome contributes to cancer-treatment response, toxicities and infection by antimicrobial-resistant microorganisms among immunocompromised individuals. Translational applications of her research include determining microbial (bacterial, fungal and viral), genetic and metabolic biomarkers for cancer-treatment outcomes. Through her research, she hopes to promote antimicrobial stewardship and microbial-conscious therapeutics.

Iliyan D. Iliev is an immunologist known for his work on mycobiota and mucosal immunity. His work highlights the importance of fungal commensalism in the gastrointestinal (GI) tract, revealing strain-dependent mechanisms of host immunity modulation and the fungal connection to inflammatory diseases and neuroimmunity. His laboratory has elucidated essential immune pathways and recently identified tumour-associated fungal species in the GI tract.

Florencia McAllister is a physician–scientist immunologist who has made substantial contributions to the host–tumour interplay by unravelling events that contribute to tumorigenesis as well as mechanisms of immunosuppression. More recently her laboratory has identified tumour bacteria enriched in pancreatic cancer that can be modulated through gut microbial changes.

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Galloway-Peña, J., Iliev, I.D. & McAllister, F. Fungi in cancer. Nat Rev Cancer 24, 295–298 (2024). https://doi.org/10.1038/s41568-024-00665-y

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