Extended Data Fig. 4: Contig-anchor contact enrichments over all anchors. | Nature Microbiology

Extended Data Fig. 4: Contig-anchor contact enrichments over all anchors.

From: Tracking microbial evolution in the human gut using Hi-C reveals extensive horizontal gene transfer, persistence and adaptation

Extended Data Fig. 4

On the x-axis is the observed number of contacts between the contig and the anchor, and on the y-axis is the enrichment score over the background model. Anchor contigs are colored red, contigs belonging to other anchors are colored blue, and all other contigs are colored gray. Anchors are extended into MAGs (genome unions) by including contigs with >=10-fold contact enrichment (dashed horizontal line), >=8 contacts (dashed vertical line), and a false positive probability of 10-6 assuming a binomial distribution (transition between vertical and horizontal line).

Back to article page