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Evidence for mid-Holocene rice domestication in the Americas

A Publisher Correction to this article was published on 14 December 2018

This article has been updated

Abstract

The development of agriculture is one of humankind’s most pivotal achievements. Questions about plant domestication and the origins of agriculture have engaged scholars for well over a century, with implications for understanding its legacy on global subsistence strategies, plant distribution, population health and the global methane budget. Rice is one of the most important crops to be domesticated globally, with both Asia (Oryza sativa L.) and Africa (Oryza glaberrima Steud.) discussed as primary centres of domestication. However, until now the pre-Columbian domestication of rice in the Americas has not been documented. Here we document the domestication of Oryza sp. wild rice by the mid-Holocene residents of the Monte Castelo shell mound starting at approximately 4,000 cal. yr bp, evidenced by increasingly larger rice husk phytoliths. Our data provide evidence for the domestication of wild rice in a region of the Amazon that was also probably the cradle of domestication of other major crops such as cassava (Manihot esculenta), peanut (Arachis hypogaea) and chilli pepper (Capsicum sp.). These results underline the role of wetlands as prime habitats for plant domestication worldwide.

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Fig. 1: Study region.
Fig. 2: Microphotographs of phytolith morphotypes recovered at the Monte Castelo shell mound and modern reference wild rice species analysed.
Fig. 3: Stratigraphic diagram of the 2014 Monte Castelo shell mound excavation layers.
Fig. 4: Oryza phytolith measurements from archaeological and botanical specimens.

Change history

  • 14 December 2018

    In the HTML version of this Article originally published, Fig. 4 was a duplicate of Fig. 1. This has now been amended.

References

  1. 1.

    Lampe, K. Rice research: food for 4 billion people. GeoJournal 35, 253–261 (1995).

    Article  Google Scholar 

  2. 2.

    Sweeney, M. & McCouch, S. The complex history of the domestication of rice. Ann. Bot. 100, 951–957 (2007).

    Article  Google Scholar 

  3. 3.

    Callaway, E. Domestication: the birth of rice. Nature 514, S58–S59 (2014).

    Article  Google Scholar 

  4. 4.

    Linares, O. F. African rice (Oryza glaberrima): history and future potential. Proc. Natl Acad. Sci. USA 99, 16360–16365 (2002).

    CAS  Article  Google Scholar 

  5. 5.

    Kroeber, A. L. Cultural and Natural Areas of Native North America (Univ. California Press, Berkeley, 1939).

  6. 6.

    Eltis, D. et al. Agency and diaspora in Atlantic history: reassessing the African contribution to rice cultivation in the Americas. Am. Hist. Rev. 112, 1329–1358 (2007).

    Article  Google Scholar 

  7. 7.

    Schmitz, P. I., Rogge, J. H., Osorio Rosa, A. & Beber, M. V. Aterros indígenas no Pantanal do Mato Grosso do Sul Vol. 54 (Instituto anchietano de Pesquisas, São Leopoldo, 1998).

  8. 8.

    Hartt, C. F. & Agassiz, L. Thayer Expedition: Scientific Results of a Journey in Brazil: by Louis Agassiz and His Travelling Companions: Geology and Physical Geography of Brazil (Fields Osgood, Boston, 1870).

  9. 9.

    May, W. Die Reiskultur, insbesonders in Brasilien. Bot. Zeitung 50, 50–66 (1862).

    Google Scholar 

  10. 10.

    Barman, R. J. The forgotten journey: Georg Heinrich Langsdorff and the Russian imperial scientific expedition to Brazil, 1821–1829. Terrae Incognitae 3, 67–96 (1971).

    Article  Google Scholar 

  11. 11.

    Winkler, H. Reis. (Monographien zur Landwirtschaft warmer Länder) Vol. 138 (Deutscher Auslandverlag W. Bangert, Hamburg, 1926).

  12. 12.

    De Azara, F. Descripción e Historia de Paraguay y del Río de la Plata (Biblioteca Virtual Miguel de Cervantes, Alicante, 2002).

  13. 13.

    Cardim, F. Tratados da Terra e Gente do Brasil (Editora Hedra, São Paulo, 2009).

  14. 14.

    de Acosta, J. Historia Natural y Moral de las Indias (Ramon Angles, Madrid, 1894).

  15. 15.

    Da Silva, C. A. A Dinâmica do Uso da Terra nos Locais Onde há Sitios Arqueológicos: o Caso da Comunidade cai n’Agua. Maniquiri-AM MA thesis (Univ. Federal do Amazonas, 2010).

  16. 16.

    Bortolotto, I. M., de Mello Amorozo, M. C., Neto, G. G., Oldeland, J. & Damasceno-Junior, G. A. Knowledge and use of wild edible plants in rural communities along Paraguay River, Pantanal, Brazil. J. Ethnobiol. Ethnomed. 11, 46 (2015).

    Article  Google Scholar 

  17. 17.

    Brochado, J. P. The Social Ecology of the Marajoara Culture. MA thesis (Univ. Illinois, 1980).

  18. 18.

    Clement, C. R. 1492 and the loss of Amazonian crop genetic resources. I. The relation between domestication and human population decline. Econ. Bot. 53, 188–202 (1999).

    Article  Google Scholar 

  19. 19.

    Piperno, D. R. & Pearsall, D. M. The Origins of Agriculture in the Lowland Neotropics (Academic Press, New York, 1998).

  20. 20.

    Soreng, R. J. et al. A worldwide phylogenetic classification of the Poaceae (Gramineae). J. System. Evol. 53, 117–137 (2015).

    Article  Google Scholar 

  21. 21.

    Judziewicz, E. J. et al. Catalogue of New World Grasses (Poaceae): I. Subfamilies Anomochlooideae, Bambusoideae, Ehrhartoideae, and Pharoideae (Smithsonian Institution, Washington DC, 2000).

  22. 22.

    Sanchez, P. L., Wing, R. A. & Brar, D. S. in Genetics and Genomics of Rice (eds Zhang, Q. & Wing, R. A.) 9–25 (Springer, New York, 2013).

  23. 23.

    Bertazzoni, E. C. & Damasceno-Júnior, G. A. Aspectos da biologia e fenologia de Oryza latifolia Desv.(Poaceae) no Pantanal sul-mato-grossense. Acta Bot. Bras. 2, 476–786 (2011).

    Article  Google Scholar 

  24. 24.

    Karasawa, M. M. et al. Mating system of Brazilian Oryza glumaepatula populations studied with microsatellite markers. Ann. Bot. 99, 245–253 (2007).

    CAS  Article  Google Scholar 

  25. 25.

    Santos, K. F., Silveira, R. D. D., Martin-Didonet, C. C. G. & Brondani, C. Storage protein profile and amino acid content in wild rice Oryza glumaepatula. Pesqui. Agropecu. Bras. 48, 66–72 (2013).

    Article  Google Scholar 

  26. 26.

    Vennum, T. Wild Rice and the Ojibway People (Minnesota Historical Society, St. Paul, 1988).

  27. 27.

    Oelke, E. A. in New Crops (eds Janick, J. & Simon, J. E.) 235–243 (Wiley, New York, 1993).

  28. 28.

    Gu, Y., Zhao, Z. & Pearsall, D. M. Phytolith morphology research on wild and domesticated rice species in East Asia. Quat. Int. 287, 141–148 (2013).

    Article  Google Scholar 

  29. 29.

    Pearsall, D. M. et al. Distinguishing rice (Oryza sativa Poaceae) from wild Oryza species through phytolith analysis: results of preliminary research. Econ. Bot. 49, 183–196 (1995).

    Article  Google Scholar 

  30. 30.

    Zhao, Z., Pearsall, D. M., Benfer, R. A. & Piperno, D. R. Distinguishing rice (Oryza sativa poaceae) from wild Oryza species through phytolith analysis, II Finalized method. Econ. Bot. 52, 134–145 (1998).

    Article  Google Scholar 

  31. 31.

    Harvey, E. L. & Fuller, D. Q. Investigating crop processing using phytolith analysis: the example of rice and millets. J. Archaeol. Sci. 32, 739–752 (2005).

    Article  Google Scholar 

  32. 32.

    Weisskopf, A. et al. Phytoliths and rice: from wet to dry and back again in the Neolithic Lower Yangtze. Antiquity 89, 1051–1063 (2015).

    Article  Google Scholar 

  33. 33.

    Purugganan, M. D. & Fuller, D. Q. The nature of selection during plant domestication. Nature 457, 843–848 (2009).

    CAS  Article  Google Scholar 

  34. 34.

    Piperno, D. R. Phytoliths: A Comprehensive Guide for Archaeologists and Paleoecologists (AltaMira Press, New York, 2006).

  35. 35.

    Piperno, D. R. & Stothert, K. E. Phytolith evidence for early Holocene Cucurbita domestication in southwest Ecuador. Science 299, 1054–1057 (2003).

    CAS  Article  Google Scholar 

  36. 36.

    Vrydaghs, L. et al. Differentiating the volcaniform phytoliths of bananas: Musa acuminata. Ethnobot. Res. Appl. 7, 239–246 (2009).

    Article  Google Scholar 

  37. 37.

    Lu, H. Y., Wu, N. Q. & Liu, B. Z. in The State-of-the-Art of Phytoliths in Soils and Plants (eds Pinilla, A., Trasseras, J. & Machado, M. J.) 159–174 (Monografias del Centro de Ciencias Medioambientales, Consejo Superior de Investigaciones Cientificas, Madrid, 1997).

  38. 38.

    Lombardo, U. et al. Early and middle holocene hunter-gatherer occupations in western Amazonia: the hidden shell middens. PLoS ONE 8, e72746 (2013).

    CAS  Article  Google Scholar 

  39. 39.

    Roosevelt, A. C. & Housley, R. A. Eighth millennium pottery from a prehistoric shell midden in the Brazilian Amazon. Science 254, 1621–1624 (1991).

    CAS  Article  Google Scholar 

  40. 40.

    Zimpel, C. A. & Pugliese, F. A. in Cerâmicas Arqueológicas da Amazônia: Rumo a Uma Nova Síntese (eds Barreto, C., Lima, H. P. & Betancourt, C. J.) 420–434 (Museu Paraense Emilio Goeldi, Belém do Pará, 2016).

  41. 41.

    Miller, E. T. Algumas culturas ceramistas, do noroeste do Pantanal do Guaporé à encosta e altiplano sudoeste do Chapadão dos Parecis. Origem, difusão/migração e adaptação – do noroeste da América do Sul ao Brasil. Revista Brasileira de Linguística Antropológica 5, 335–383 (2013).

    Article  Google Scholar 

  42. 42.

    Miller, E. T. Arqueologia nos empreendimentos hidrelétricos da Eletronorte: resultados preliminares (Eletronorte. Ministerio de Minas e Energia, Brasilia, 1992).

  43. 43.

    Zohary, D. Unconscious selection and the evolution of domesticated plants. Econ. Bot. 58, 5–10 (2004).

    Article  Google Scholar 

  44. 44.

    Iriarte, J. et al. Out of Amazonia: late-Holocene climate change and the Tupi–Guarani trans-continental expansion. Holocene 27, 967–975 (2016).

    Article  Google Scholar 

  45. 45.

    Austin, D. F. Fox-tail millets (Setaria: Poaceae)—abandoned food in two hemispheres. Econ. Bot. 60, 143–158 (2006).

    Article  Google Scholar 

  46. 46.

    Yarnell, R. A. Iva annua var. macrocarpa: extinct American cultigen? Am. Anthropol. 74, 335–341 (1972).

    Article  Google Scholar 

  47. 47.

    Kanapeckas, K. L. et al. Escape to ferality: the endoferal origin of weedy rice from crop rice through de-domestication. PLoS ONE 11, e0162676 (2016).

    Article  Google Scholar 

  48. 48.

    Fuller, D. Q. & Qin, L. Water management and labour in the origins and dispersal of Asian rice. World Archaeol. 41, 88–111 (2009).

    Article  Google Scholar 

  49. 49.

    Pohl, M. D. et al. Early agriculture in the Maya lowlands. Latin Am. Antiq. 7, 355–372 (1996).

    Article  Google Scholar 

  50. 50.

    Global Biodiversity Information Facility Version 1.0 (GBIS, Copenhagen, accessed 5 May 2017); https://www.gbif.org/.

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Acknowledgements

The research was funded by the European Research Council project ‘Pre-Columbian Amazon-Scale Transformations’ (ERC-CoG 616179) to J.I. L.M.H. was funded by CAPES (Ministry of Education, Brazil) and Monte Castelo fieldwork was funded by grants from the Brazilian National Science Development Council (CNPq-307179/2013-3) and The National Geographic Society (W243-12) to E.G.N.

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L.H., J.I. and E.G.N. designed research; E.G.N., F.P., M.S. and C.A.Z. performed archaeological excavations at Monte Castelo; L.H. undertook phytolith analysis; B.S.W. carried out statistical analyses; E.V. provided Oryza reference collection samples for analysis; J.I. and L.H. led the writing of the paper with inputs from all other authors.

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Correspondence to José Iriarte.

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Hilbert, L., Neves, E.G., Pugliese, F. et al. Evidence for mid-Holocene rice domestication in the Americas. Nat Ecol Evol 1, 1693–1698 (2017). https://doi.org/10.1038/s41559-017-0322-4

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