Correction to: Nature Communications https://doi.org/10.1038/s41467-021-25534-2, published online 6 September 2021.
In the original PDF version of this Article, there was an error in the code within the 'Methods' subsection ‘scETM software’. The original text read:
“from scETM import scETM,
UnsupervisedTrainermodel = scETM(adata.n_
vars, adata.obs.batch_indices.nunique())
trainer = UnsupervisedTrainer(model, adata)
trainer.train(save_model_ckpt = False)model.
get_all_embeddings_and_nll(adata)”
The correct format is:
“from scETM import scETM, UnsupervisedTrainer
model = scETM(adata.n_vars, adata.obs.batch_indices.nunique())
trainer = UnsupervisedTrainer(model, adata)
trainer.train(save_model_ckpt = False)
model.get_all_embeddings_and_nll(adata)”
This has been corrected in the PDF version of the Article; the HTML version was correct at the time of publication.
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Zhao, Y., Cai, H., Zhang, Z. et al. Publisher Correction: Learning interpretable cellular and gene signature embeddings from single-cell transcriptomic data. Nat Commun 12, 5860 (2021). https://doi.org/10.1038/s41467-021-26140-y
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DOI: https://doi.org/10.1038/s41467-021-26140-y
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