Fig. 6: Estimating how many contact reads per chromatin bead are required for Si-C to achieve reliable 3D structure. | Nature Communications

Fig. 6: Estimating how many contact reads per chromatin bead are required for Si-C to achieve reliable 3D structure.

From: Si-C is a method for inferring super-resolution intact genome structure from single-cell Hi-C data

Fig. 6

Log-scale plot of median RMSD within the structure ensemble of cell 1 against the resolution. The threshold of the median value of pairwise RMSDs for a reliably calculated structure ensemble set to be 4 bead diameters, indicated by the dashed line. RMSD root-mean-square deviation.

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