Prior vaccination with the rVSV-ZEBOV vaccine does not interfere with but improves the efficacy of postexposure antibody treatment in nonhuman primates exposed to Ebola virus

A replication-competent, vesicular stomatitis virus vaccine expressing the Ebola virus (EBOV) glycoprotein (GP) (rVSV-ZEBOV) was successfully used during the 2013-16 EBOV epidemic1. Additionally, chimeric and human monoclonal antibodies (mAb) against the EBOV GP showed promise in animals and EBOV patients when administered therapeutically2-6. Given the large number of at-risk humans being prophylactically vaccinated with rVSV-ZEBOV, there is uncertainty regarding whether vaccination would preclude use of antibody treatments in the event of a known exposure of a recent vaccinee. To model a worst-case scenario, we performed a study using rhesus monkeys vaccinated or unvaccinated with the rVSV-ZEBOV vaccine. One day after vaccination, animals were challenged with a uniformly lethal dose of EBOV. Five vaccinated animals and five unvaccinated animals were then treated with the anti-EBOV GP mAb-based therapeutic MIL77 starting 3 days postexposure. Additionally, five vaccinated macaques received no therapeutic intervention. All five macaques that were vaccinated and subsequently treated with MIL77 showed no evidence of clinical illness and survived challenge. In contrast, all five animals that only received the rVSV-ZEBOV vaccine became ill and 2/5 survived; all five macaques that only received MIL77 only also became ill and 4/5 survived. Enhanced efficacy of vaccinated animals that were treated with MIL77 was associated with delayed EBOV viremia attributed to the vaccine. These results suggest that rVSV-ZEBOV augments immunotherapy.


Introduction
Outbreaks of lovirus disease have become increasingly di cult to manage due to increased connectivity in endemic regions coupled with inadequate public health infrastructures and lack of approved medical countermeasures including diagnostics, therapeutics, and vaccines.Due to the sporadic nature of these outbreaks, the development and e cacy testing of preventative vaccines and postexposure treatments has previously been limited to animal models, including nonhuman primates, in which complete protection from lethal EBOV challenge has been demonstrated [7][8][9] .The unprecedented magnitude of the 2013-16 West African EBOV epidemic offered a unique opportunity to assess the e cacy of some of the most promising medical countermeasures available at that time 7,8 .Notably, the rVSV-ZEBOV vaccine was shown to provide 100% e cacy (95% CI 68•9-100•0, p = 0•0045) when used in Guinea in a ring vaccination, open-label, cluster-randomized Phase III clinical trial 1 .The same vaccine has reportedly shown similar levels of success on a larger scale in the current outbreak of EBOV in the Democratic Republic of Congo (DRC), having been administered to over 200,000 people 10 .Due to the widespread deployment of the rVSV-ZEBOV vaccine within a hot zone and to medical professionals, vaccinated individuals may encounter high risk exposures to EBOV prior to the development of protective immunity.
The post-vaccination window of susceptibility has raised questions and concerns around the use of EBOV therapeutic options for such cases.The most signi cant concern being the impact of potentially detrimental interference resulting from co-administration of a vaccine displaying EBOV GP as an immunogen with therapeutic mAbs that target EBOV GP, currently the most effective postexposure EBOV interventions available for human use [2][3][4][5][6] .
Previous studies have shown that the rVSV-ZEBOV vaccine causes a transient viremia in nonhuman primates (NHP) between days 2 and 4 after vaccination 11,12 .The half-life of rVSV-ZEBOV GP antigen in tissues of vaccinated primates is unknown; however, the presence of rVSV-ZEBOV GP in tissues was only detected in 2/6 pigs at day 3 post vaccination 13 .Thus, either circulating rVSV-ZEBOV or expression of EBOV GP from rVSV-ZEBOV-infected tissues could interfere with subsequent administration of any mAbbased therapeutic targeting EBOV GP.

Results And Discussion
In order to address the potential issue of vaccine/therapeutic interference we employed a uniformly lethal rhesus macaque model of EBOV infection 9 .In brief, sixteen animals were divided into three experimental groups (n = 5/group) and one control animal.Animals in one group were given the rVSV-ZEBOV vaccine on day -1 and then received the anti-EBOV GP mAb therapeutic MIL77 on days 3, 6, and 9 at 20 mg/kg/dose after EBOV exposure.The MIL77 immunotherapeutic was selected based on availability and previous results in EBOV-challenged NHPs 5 .We reduced the dose of MIL77 from a therapeutically proven dose of 50 mg/kg to 20 mg/kg 5 to deliver a dose on the margin of protection and accentuate any potential interference from the rVSV-ZEBOV vaccine.Animals in the second experimental group only received the rVSV-ZEBOV vaccine on day -1 and animals in the third experimental group were only treated with MIL77 on days 3, 6, and 9 post-infection (dpi) (20 mg/kg/dose).The single EBOV challenge control animal was not vaccinated or given mAb therapy and succumbed to disease 9 days postexposure.Importantly, 12 historical control rhesus macaques challenged via the same route with the same EBOV seed stock and target dose all succumbed 6 to 9 days after challenge (Figure 1a) 9,14 .
The unvaccinated/untreated control animal developed clinical symptoms of EBOV disease (EVD) beginning at 5 dpi (Figure 1b, Supplementary Table 1),, and succumbed to disease at 9 dpi (Figure 1a).. Animals that were either vaccinated day -1 with rVSV-ZEBOV or treated day 3, 6, and 9 dpi with MIL77 all developed clinical illness with 2/5 and 4/5 animals in each group surviving, respectively (Figure 1c,d).. Notably, all ve animals that were vaccinated day -1 with rVSV-ZEBOV and subsequently treated on days 3, 6, and 9 with MIL77 survived to the study endpoint (28 dpi) without developing any clinical signs of EVD.There was a signi cant difference in survival between the rVSV-ZEBOV + MIL77 treated group and the control animal (p = 0.0253, Mantel-Cox log-rank test), and between the rVSV-ZEBOV + MIL77 and rVSV-ZEBOV treatment groups (p = 0.0486, Mantel-Cox log rank test) (Figure 1a)..No signi cant difference was detected between the experimental control animal in this study and historical control (HC) rhesus macaques (N = 12).However, differences were detected when comparing the experimental treatment groups with the HC NHPs (p = 0.0003 for rVSV-ZEBOV + MIL77 vs. HC; p = 0.0072 for rVSV-ZEBOV vs. HC; p = 0.0009 for MIL77 vs. HC).
There were notable differences in clinical pathology and the course of EVD between the experimental treatment groups.A single animal (#180206) in the dual-treatment group developed fever 1 dpi, which was most likely vaccine associated, whereas the control animal and 4/5 animals each in the vaccination only and mAb treatment only groups developed fever 6-9 dpi, which coincided with the appearance of other signs of EVD (Figure 1b-d, Supplementary Tables 2,3).. Post-mortem pathological ndings in the control animal and vaccinated or treated animals that succumbed was consistent with previous reports of EVD in macaques (Figure 3d, h, l, p, t, and x) 15,16 .Animals surviving challenge, including all animals in the rVSV-ZEBOV + MIL77 treatment group, exhibited no signi cant gross or histopathological ndings (Figure 3a-c, e-g, i-k, m-o, q-s, u-w).
Infectious rVSV-ZEBOV was detected by plaque assay up to 2 days post-vaccination in all vaccinated animals except one (#180295) which had low level (1.4 log 10 pfu/ml) viremia on day 4 post-vaccination.
Detection of circulating EBOV genomic RNA (vRNA) and infectious virus was performed by RT-qPCR and plaque assay titration, respectively.Consistent with historical controls challenged with the same EBOV seed stock, the experimental control animal had 2 log 10 pfu/ml of infectious EBOV by 3 dpi and 8.46 log 10 GEq of vRNA by 6 dpi, which then peaked on 9 dpi at euthanasia for both detection methods (Figure 2a, Supplementary Figure 1).The vaccine only group had detectable EBOV vRNA by 6 dpi in 4/5 animals and by 9 dpi in the remaining animal.Infectious EBOV was detected in the same group by 6 dpi in 2/5 animals with peak viral titers comparable to both the experimental and HC animals (Supplementary Figure 1)..In the MIL77 only group, vRNA was detected by 3 dpi in 3/5 animals and in 5/5 by 9 dpi, but none had detectable circulating infectious EBOV.In stark contrast, none of the rVSV-EBOV + MIL77 animals had detectable EBOV vRNA or detectable circulating infectious EBOV at any point postexposure (Figure 2a, c, and d),, consistent with the total lack of clinical scoring in this group.
We used ELISA-based detection to estimate total host derived anti-VP40 IgM and IgG as well as anti-GP IgM.Notably, the rVSV-ZEBOV + MIL77 (3/5) group and the rVSV-ZEBOV animals that survived had detectable IgM to VP40 and GP by 6 dpi, yet the MIL77 IgM responses were at or below the limit of detection for the assays.All animals from the rVSV-ZEBOV + MIL77, and any surviving animals from the rVSV-ZEBOV or MIL77 groups, had clear evidence of circulating IgG antibodies against VP40 at 9 dpi through the end of the study.Interestingly, signi cantly higher levels of circulating MIL77 were detected in the rVSV-ZEBOV + MIL77 animals on 9 dpi where the trend continued out to 14 dpi, suggesting that consumption of the therapeutic occurred at a higher rate in the MIL77 animals and vaccinated animals were supplemented with host derived humoral responses thereby dampening the clearance of the therapeutic.In all groups, no MIL77 was detected at the study endpoint (28 dpi).The 2013-16 West African and current EBOV epidemic in the DRC, both of previously unprecedented proportion, have demonstrated the critical need for e cacious medical countermeasures.However, the potential for deleterious interference between different modes of treatment presents a possible barrier to the development and approval of protocols utilizing a combinatorial approach.Studies in NHPs investigating protection by the rVSV-ZEBOV vaccine when administered as a postexposure intervention have demonstrated only partial protection suggesting that additional postexposure countermeasures may be necessary 17,18 .Indeed, seroconversion offering protective immunity does not occur before 3 days postvaccination in NHPs 19 , and the same is likely true in humans 20 .Given that all current candidate postexposure mAb therapeutics in clinical trials target the EBOV GP, which is also the antigenic immunogen displayed by the rVSV-ZEBOV vaccine vector, signi cant concern exists regarding the potential for interference between these types of products.Accordingly, we performed a narrowly focused study utilizing rhesus monkeys to model a scenario likely occurring during the current outbreak in DRC; namely, high-risk exposure to EBOV in individuals recently vaccinated with rVSV-ZEBOV.To assess the potential contraindication of subsequent mAb treatment, we treated a cohort of vaccinated animals with the MIL77 mAb cocktail at days 3, 6, and 9 dpi.Surprisingly, instead of interference, we observed clear therapeutic bene t, where animals vaccinated before EBOV challenge and then subsequently treated postexposure were afforded complete protection without any observable clinical disease.In contrast, animals that received vaccination only or mAb treatment only displayed signi cant signs of clinical EVD, and in the case of the vaccine only group, limited protection.
It has recently been demonstrated that induction of potent innate immune effector mechanisms occurs in the context of rVSV-ZEBOV vaccination 21 .Indeed, others have shown modest widening of the therapeutic window upon administration of exogenous interferon-alpha modalities, although neither approach was enough to induce protection 22,23 .While the precise mechanism is unclear, the scenario presented here suggests reduction of circulating infectious EBOV complements the induction of vaccine-induced EBOV immunity, ultimately reducing morbidity and likely contributing to survival.Of note, a precedent for a tandem approach of vaccination and mAb treatment for postexposure treatment is the standard protocol for rabies virus exposure, which recommends both vaccination with the inactivated rabies virus vaccine and treatment with human rabies immunoglobulin 24 .Our study suggests that a similar approach to treatment may be appropriate for high-risk EBOV exposure and that mAb therapy post-vaccination may improve clinical outcome in recently vaccinated individuals.

Methods
Challenge virus.Zaire ebolavirus (EBOV) isolate 199510621 (strain Kikwit) originated from a 65-year-old female patient who had died on 5 May 1995.The study challenge material was from the second Vero E6 passage of EBOV isolate 199510621.Briefly, the first passage at UTMB consisted of inoculating CDC 807223 (passage 1 of EBOV isolate 199510621) at a MOI of 0.001 onto Vero E6 cells.The cell culture uids were subsequently harvested at day 10 post infection and stored at -80°C as ~1 ml aliquots.Deep sequencing indicated the EBOV was greater than 98% 7U (consecutive stretch of 7 uridines).No detectable mycoplasma or endotoxin levels were measured ( 0.5 endotoxin units (EU)/ml).
Nonhuman primate vaccination, challenge, and treatment.Sixteen healthy, filovirus-naive, adult (~ 3.7 to 5.4 kg) Chinese origin rhesus macaques (Macaca mulatta; PreLabs) were randomized into three groups of ve experimental animals each and a control group of one animal.Animals in two of the experimental animals were vaccinated by intramuscular (i.m.) injection of ~ 2x10^7 PFU of the rVSV-ZEBOV GP vaccine based on the Mayinga strain 25 ; this is the same dose used for humans 1 .Animals in the remaining experimental group as well as the control animal were not vaccinated.All 16 of the macaques were challenged one day after vaccination of the experimental groups by i.m. injection with a target dose of 1,000 PFU of EBOV strain Kikwit.Experimental animals in one of the vaccinated groups (rVSV-ZEBOV + MIL77) and one of the unvaccinated groups (MIL77 only) were treated by intravenous (i.v.) administration of ~ 20 mg/kg of MIL77 on days 3, 6, and 9 after EBOV challenge while animals in the experimental unvaccinated group (rVSV-ZEBOV only) and the control animal were not treated.All 16 animals were given physical examinations, and blood was collected before vaccination (day -1), before virus challenge (day 0), and on days 1, 3, 6, 9, 14, 21, and 28 (study endpoint) after virus challenge.The macaques were monitored daily and scored for disease progression with an internal EBOV humane endpoint scoring sheet approved by the UTMB IACUC.UTMB facilities used in this work are accredited by the Association for Assessment and Accreditation of Laboratory Animal Care International and adhere to principles speci ed in the eighth edition of the Guide for the Care and Use of Laboratory Animals, National Research Council.The scoring changes measured from baseline included posture and activity level, attitude and behavior, food intake, respiration, and disease manifestations, such as visible rash, hemorrhage, ecchymosis, or ushed skin.A score of ≥ 9 indicated that an animal met the criteria for euthanasia.
Detection of viremia.RNA was isolated from whole blood utilizing the Viral RNA mini-kit (Qiagen) using 100 µl of blood added to 600 µl of the viral lysis buffer.Primers and probe targeting the VP30 gene of EBOV were used for real-time quantitative PCR (RT-qPCR) with the following probes: EBOV, 6carboxyfluorescein (FAM)-5 = CCG TCA ATC AAG GAG CGC CTC 3 = -6 carboxytetramethylrhodamine (TAMRA) (Life Technologies).Viral RNA was detected using the CFX96 detection system (Bio-Rad Laboratories, Hercules, CA) in one-step probe RT-qPCR kits (Qiagen) with the following cycle conditions: 50°C for 10 min, 95°C for 10 s, and 40 cycles of 95°C for 10 s and 57°C for 30 s. Threshold cycle (CT) values representing viral genomes were analyzed with CFX Manager software, and the data are shown as genome equivalents (GEq) per milliliter.To create the GEq standard, RNA from viral stocks was extracted, and the number of strain-specific genomes was calculated using Avogadro's number and the molecular weight of each viral genome.
Virus titration was performed for rVSV-ZEBOV and for EBOV by plaque assay with Vero E6 cells from all plasma samples as previously described 25 .Brie y, increasing 10-fold dilutions of the samples were adsorbed to Vero E6 monolayers in duplicate wells (200 µL); the limit of detection was 25 PFU/mlL Hematology and serum biochemistry.Total white blood cell counts, white blood cell differentials, red blood cell counts, platelet counts, hematocrit values, total hemoglobin concentrations, mean cell volumes, mean corpuscular volumes, and mean corpuscular hemoglobin concentrations were analyzed from blood collected in tubes containing EDTA using a laser-based hematologic analyzer (Beckman Coulter).Serum samples were tested for concentrations of alanine aminotransferase (ALT), albumin, alkaline phosphatase (ALP), amylase, aspartate aminotransferase (AST), C-reactive protein (CRP), calcium, creatinine, gammaglutamyltransferase (GGT), glucose, total protein, blood urea nitrogen (BUN), and uric acid, and by using a Piccolo point-of-care analyzer and Biochemistry Panel Plus analyzer discs (Abaxis).
Histopathology and immunohistochemistry.A partial necropsy was performed on all subjects.Tissue samples of major organs were collected for histopathologic and immunohistochemical examination, immersion-xed in 10% neutral buffered formalin, and processed for histopathology as previously described 26,27 .For immunohistochemistry, speci c anti-ZEBOV immunoreactivity was detected using an anti-ZEBOV VP40 primary antibody (IBT) at a 1:4000 dilution for 60 minutes.The tissues were processed for immunohistochemistry using the Thermo Autostainer 360 (ThermoFisher, Kalamazoo, MI).
Secondary used was biotinylated goat anti-rabbit IgG (Vector Labs, Burlingame, CA #BA-1000) at 1:200 for 30 minutes followed by Vector Horseradish Peroxidase Streptavidin, R. T.U (Vector) for 30 min.Slides were developed with Dako DAB chromagen(Dako, Carpenteria, CA #K3468) for 5 minutes and counterstained with Harris Hematoxylin for 30 seconds.Non-immune rabbit IgG was used as a negative control.
Detection of total IgM and IgG responses to Ebola VP40 and GP.ELISA plates were coated overnight at 4°C with 0.1 µg/mL of EBOV GP-TM (Integrated Biotherapeutics) or recombinant VP40 antigen coated plates (Zalgen) were used both of which were blocked for 2 hours prior to use.Serum samples were assayed using a 1:100 dilution in ELISA diluent (1% heat-inactivated fetal bovine serum, 1× phosphate-buffered saline, and 0.2% Tween-20).Samples were incubated for 1 hour at ambient temperature and then removed, and plates were washed.Wells then were incubated for 1 hour with goat anti-NHP IgM or IgG conjugated to horseradish peroxidase (Fitzgerald Industries International) at a 1:5000 dilution.Wells were washed and then incubated with tetramethylbenzidine substrate (KPL) (100 uL/well) and incubated for 10 minutes followed by stop solution (100 uL/well).Microplates are read at 450 nm with 650 nm subtraction with an OD450 nm cut-off of 0.069.
Detection of Circulating MIL77 antibody.ELISA plates were coated overnight at 4°C with 0.1 µg/mL of mouse anti-human IgG (human CH2 domain with no cross-reactivity to rhesus macaque IgG; clone R10Z8E9; BioRad) and then blocked for 2 hours.The serum samples were assayed at 4-fold dilutions starting at a 1:100 dilution in ELISA diluent (1% heat-inactivated fetal bovine serum, 1× phosphate-buffered saline, and 0.2% Tween-20).Samples were incubated for 1 hour at ambient temperature and then removed, and plates were washed.Wells then were incubated for 1 hour with goat anti-human IgG conjugated to horseradish peroxidase (Fitzgerald Industries International) at a 1:20,000 dilution.Wells were washed and then incubated with tetramethylbenzidine substrate (KPL) (100 uL/well) and incubated for 10 minutes followed by stop solution (100 uL/well).Microplates are read at 450 nm with 650 nm subtraction with an OD450 nm cut-off of 0.071(Biotek Cytation system).mAb were quanti ed using Prism software, version 7.04 (GraphPad), to analyze sigmoidal dose-response (variable slope), using MIL77 as standard.

Statistical analysis.
Speci c statistical tests are noted in the text and/or gure legends.All statistical analysis was performed in Graphpad 8.

Figures
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Table 2 .
2.1.DeclarationsStudy approval.The animal studies were performed at the Galveston National Laboratory, University of Texas Medical Branch at Galveston and were approved by the University of Texas Medical Branch Institutional Animal Care and Use Committee.numbers of lymphocytes, granulocytes, monocytes, and platelets, respectively.Leukocytosis, monocytosis, and granulocytosis are de ned by a two-fold or greater increase in numbers of white blood cells over base line.Fever is de ned as a temperature more than 2.5 °F over baseline, or at least 1.5 °F over baseline and ≥ 103.5 °F.Hypothermia is de ned as a temperature ≤ 3.5°F below baseline.Hyperglycemia is de ned as a two-fold or greater increase in levels of glucose.Hypoglycemia is de ned by a ≥ 25% decrease in levels of glucose.Hypoalbuminemia is de ned by a ≥ 25% decrease in levels of albumin.Hypoproteinemia is de ned by a ≥ 25% decrease in levels of total protein.Hypoamylasemia is de ned by a ≥ 25% decrease in levels of serum amylase.Hypocalcemia is de ned by a ≥ 25% decrease in levels of serum calcium.(ALT) alanine aminotransferase, (AST) aspartate aminotransferase, (ALP) Clinical description and outcome of rVSV-EBOV-GP vaccinated rhesus macaques following EBOV challenge: Days after EBOV challenge in parentheses.Lymphopenia, granulopenia, monocytopenia, and thrombocytopenia are de ned by a ≥35% drop in numbers of lymphocytes, granulocytes, monocytes, and platelets, respectively.Leukocytosis, monocytosis, and granulocytosis are de ned by a two-fold or greater increase in numbers of white blood cells over base line.Fever is de ned as a temperature more than 2.5 °F over baseline, or at least 1.5 °F over baseline and ≥ 103.5 °F.Hypothermia is de ned as a temperature ≤3.5°F below baseline.Hyperglycemia is de ned as a two-fold or greater increase in levels of glucose.Hypoglycemia is de ned by a ≥ 25% decrease in levels of glucose.Hypoalbuminemia is de ned by a ≥ 25% decrease in levels of albumin.Hypoproteinemia is de ned by a ≥ 25% decrease in levels of total protein.Hypoamylasemia is de ned by a ≥ 25% decrease in levels of serum amylase.Hypocalcemia is de ned by a ≥ 25% decrease in levels of serum calcium.

Table 3 .
Clinical description and outcome of MIL77 treated rhesus macaques following EBOV challenge: Days after EBOV are in parentheses.Lymphopenia, granulopenia, monocytopenia, and thrombocytopenia are de ned by a ≥35% drop in numbers of lymphocytes, granulocytes, monocytes, and platelets, respectively.Leukocytosis, monocytosis, and granulocytosis are de ned by a two-fold or greater increase in numbers of white blood cells over base line.Fever is de ned as a temperature more than 2.5 °F over baseline, or at least 1.5 °F over baseline and ≥ 103.5 °F.Hypothermia is de ned as a temperature ≤ 3.5°F below baseline.Hyperglycemia is de ned as a two-fold or greater increase in levels of glucose.Hypoglycemia is de ned by a ≥ 25% decrease in levels of glucose.Hypoalbuminemia is de ned by a ≥ 25% decrease in levels of albumin.Hypoproteinemia is de ned by a ≥ 25% decrease in levels of total protein.Hypoamylasemia is de ned by a ≥ 25% decrease in levels of serum amylase.Hypocalcemia is de ned by a ≥ 25% decrease in levels of serum calcium.