Table 1 Summary of snRNA-seq and bulk expression datasets used for benchmarking Bisque and existing methods.

From: Accurate estimation of cell composition in bulk expression through robust integration of single-cell information

TissueNumber of samplesBulk RNA-seq platformsnRNA-seq platformsnRNA-seq samplesTotal nucleiAverage nuclei per individualNumber of cell types
Subcutaneous adipose106Illumina NovaSeq10x Genomics Chromium610,94718245
Dorsolateral prefrontal cortex636Illumina HiSeq10x Genomics Chromium868,028850311