Table 2 The number of modified and un-modified bases of interest used for evaluation on E. coli when coverage ≥ 1

From: Detection of DNA base modifications by deep recurrent neural network on Oxford Nanopore sequencing data

Data set name Base of interest Modification # modified base in motif # non-modified base in motif # base not in motif
CG_MpeI cytosine (C) 5mC 693,518 693,427 3,326,971
CG_SssI 682,526 693,427 3,297,528
GCGC_HhaI 70,172 70,160 4,573,777
gaAttc_EcoRI adenine (A) 6mA 277 280 1,003,885
gAtc_dam 7816 7831 989,363
tcgA_TaqI 6351 6403 989,375