Table 1 Pancreatic islet datasets

From: Bulk tissue cell type deconvolution with multi-subject single-cell expression reference

Name Journal Year Accesession # Tissue type Data type Protocol # Samples # Cells # Genes # Cell types
Segerstolpe et al.8 Cell Metabolism 2016 E-MTAB-5061 Pancreatic islet Single-cell RNA-seq Smart-seq2 10 (6 H + 4 T2D) 2209 25,453 14 + 1 NA
Segerstolpe et al.8 Cell Metabolism 2016 E-MTAB-5060 Pancreatic islet Bulk RNA-seq Smart-seq2 7 (3 H + 4 T2D) NA 25,453 NA
Xin et al.9 Cell Metabolism 2016 GSE81608 Islet: endocrine Single-cell RNA-seq Illumina HiSeq 2500 18 (12 H + 6 T2D) 1492 39,849 4
Baron et al.4 Cell Systems 2016 GSE81433 Pancreatic islet Single-cell RNA-seq Illumina HiSeq 2500 (InDrop) 3 healthy 7729 17,434 14 + 1 NA
Fadista et al.6 PNAS 2014 GSE50244 Pancreatic islet Bulk RNA-seq Illumina HiSeq 2000 89 NA 56,638 NA