Fig. 3: | Nature Communications

Fig. 3

From: Using single nucleotide variations in single-cell RNA-seq to identify subpopulations and genotype-phenotype linkage

Fig. 3

Comparison of clustering visualization using eeSNV and gene expression (GE) features. a Bipartite graphs using eeSNVs and cells as two groups of nodes. An edge between a cell and an eeSNV represents the presence of the eeSNV within that cell. b Principle component analysis (PCA) results using GE as features of the cells. c PCA results using eeSNVs as features of the cells. d SIMILR results using GE as the input