Table 1 Bayesian Network Model Parameters

From: Genome-scale identification of transcription factors that mediate an inflammatory network during breast cellular transformation

  Normalized value Type Range
PWM score (f i ) (Fimo_Score i -10)/10 Continuous (0, 1)
Distance to TSS (d i ) 1/(1+TSS_dist i /1000) Continuous (0, 1)
Conservation (c i ) PhastCon Score in placenta Continuous (0, 1)
TF binding (b i ) Hidden Binary 0, 1
DNase I tag (n i ) DNase-seq read # in 200 bp upstream or downstream from the motif Continuous (0, +)