Fig. 7 | Nature Communications

Fig. 7

From: Strain profiling and epidemiology of bacterial species from metagenomic sequencing

Fig. 7

S. epidermidis strains in early stages of an infant gut colonization. a Three coexisting strains were found, with shifting relative abundances. While the three initial samples were dominated by strain 504_SEPI, at later times, strain 236_SEPI was the most abundant. b Whole-genome cladogram of the reference genomes, also including the two high-quality genome sequences (Sharon strain 1 and Sharon strain 3) assembled in the original paper from the same samples. These genomes are closely related to the two strains identified by StrainEst

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