Fig. 3: Synteny and collinearity between diploid Rosa and Fragaria. | Horticulture Research

Fig. 3: Synteny and collinearity between diploid Rosa and Fragaria.

From: Genotyping-by-sequencing application on diploid rose and a resulting high-density SNP-based consensus map

Fig. 3

a Circos plot depicting the syntenic relationship between the rose and strawberry linkage groups based on the mapping of rose GBS reads to the Fragaria vesca genome sequence. Rose and strawberry were designated as ICD (right) and Fvb (left). Fvb numbering corresponds to the F. vesca pseudo-chromosomes with distances in Mb. Rose ICD homologs containing the SNP markers per linkage group are shown with distances in cM. b Dot plot comparing rose LGs (ICD) in cM and Fvb assembly physical positions in Mbp. Each dot represents one SNP marker