Abstract
We demonstrate that dissolved polymers can direct molecular crystallization behavior under dilute and crowded conditions. Larger poly(ethylene glycol)s (PEGs) accelerated caffeine crystal formation in the dilute regime of PEG solutions, which was attributed to the depletion attraction that promoted caffeine cluster aggregation into crystal nuclei. Alternatively, in the semidilute regime, the caffeine crystal formation rate was insensitive to the molecular weight (MW) of PEGs. PEGs with various MWs appeared to induce depletion attraction to a similar extent as the properties of polymer solutions in the semidilute regime described by blobs, which are constant in size at a given polymer concentration irrespective of MW. This study highlights differences between in vitro polymer solutions and crowded intracellular environments composed of folded biomacromolecules and contributes to developing the use of in vitro macromolecular crowding for the control of molecular self-assembly.
This is a preview of subscription content, access via your institution
Access options
Subscribe to this journal
Receive 12 print issues and online access
$259.00 per year
only $21.58 per issue
Buy this article
- Purchase on Springer Link
- Instant access to full article PDF
Prices may be subject to local taxes which are calculated during checkout
Similar content being viewed by others
References
Ellis RJ. Macromolecular crowding: obvious but underappreciated. Trends Biochem Sci. 2001;26:597–604.
Minton AP. The influence of macromolecular crowding and macromolecular confinement on biochemical reactions in physiological media. J Biol Chem. 2001;276:10577–80.
Nakano S, Miyoshi D, Sugimoto N. Effects of molecular crowding on the structures, interactions, and functions of nucleic acids. Chem Rev. 2014;114:2733–58.
Rivas G, Minton AP. Macromolecular crowding in vitro, in vivo, and in between. Trends Biochem Sci. 2016;41:970–81.
Hata Y, Sawada T, Serizawa T. Macromolecular crowding for materials-directed controlled self-assembly. J Mater Chem B 2018;6:6344–59.
Asakura S, Oosawa F. Interaction between particles suspended in solutions of macromolecules. J Polym Sci. 1958;33:183–92.
Yodh AG, Lin K-H, Crocker JC, Dinsmore AD, Verma R, Kaplan PD. Entropically driven self-assembly and interaction in suspension. Philos Trans R Soc A Math Phys Eng Sci. 2001;359:921–37.
Marenduzzo D, Finan K, Cook PR. The depletion attraction: an underappreciated force driving cellular organization. J Cell Biol. 2006;175:681–6.
Munishkina LA, Cooper EM, Uversky VN, Fink AL. The effect of macromolecular crowding on protein aggregation and amyloid fibril formation. J Mol Recognit. 2004;17:456–64.
White DA, Buell AK, Knowles TPJ, Welland ME, Dobson CM. Protein aggregation in crowded environments. J Am Chem Soc. 2010;132:5170–5.
Batra J, Xu K, Qin S, Zhou H-X. Effect of macromolecular crowding on protein binding stability: modest stabilization and significant biological consequences. Biophys J. 2009;97:906–11.
Qin S, Zhou H-X. Atomistic modeling of macromolecular crowding predicts modest increases in protein folding and binding stability. Biophys J. 2009;97:12–9.
Hassan MM, Martin AD, Thordarson P. Macromolecular crowding and hydrophobic effects on Fmoc-diphenylalanine hydrogel formation in PEG:water mixtures. J Mater Chem B. 2015;3:9269–76.
Satyam A, Kumar P, Fan X, Gorelov A, Rochev Y, Joshi L, et al. Macromolecular crowding meets tissue engineering by self-assembly: a paradigm shift in regenerative medicine. Adv Mater. 2014;26:3024–34.
Ng WL, Goh MH, Yeong WY, Naing MW. Applying macromolecular crowding to 3D bioprinting: fabrication of 3D hierarchical porous collagen-based hydrogel constructs. Biomater Sci. 2018;6:562–74.
Myhrvold C, Dai M, Silver PA, Yin P. Isothermal self-assembly of complex DNA structures under diverse and biocompatible conditions. Nano Lett. 2013;13:4242–8.
Hata Y, Kojima T, Koizumi T, Okura H, Sakai T, Sawada T, et al. Enzymatic synthesis of cellulose oligomer hydrogels composed of crystalline nanoribbon networks under macromolecular crowding conditions. ACS Macro Lett. 2017;6:165–70.
Hata Y, Sawada T, Serizawa T. Effect of solution viscosity on the production of nanoribbon network hydrogels composed of enzymatically synthesized cellulose oligomers under macromolecular crowding conditions. Polym J. 2017;49:575–81.
Tortora L, Lavrentovich OD. Chiral symmetry breaking by spatial confinement in tactoidal droplets of lyotropic chromonic liquid crystals. Proc Natl Acad Sci USA. 2011;108:5163–8.
Park H-S, Kang S-W, Tortora L, Kumar S, Lavrentovich OD. Condensation of self-assembled lyotropic chromonic liquid crystal Sunset Yellow in aqueous solutions crowded with polyethylene glycol and doped with salt. Langmuir 2011;27:4164–75.
Onuchic JN, Luthey-Schulten Z, Wolynes PG. Theory of protein folding: the energy landscape perspective. Annu Rev Phys Chem. 1997;48:545–600.
Dill KA, MacCallum JL. The protein-folding problem, 50 years on. Science. 2012;338:1042–6.
Flory PJ. Principles of polymer chemistry. Ithaca: Cornell University Press; 1953.
Flory PJ. Statistical mechanics of chain molecules. New York: Interscience; 1969.
de Gennes P-G. Scaling concepts in polymer physics. Ithaca: Cornell University Press; 1979.
Fuchs M, Schweizer KS. Structure of colloid-polymer suspensions. J Phys Condens Matter. 2002;14:R239–R269.
Maruyama T, Restu WK. Intracellular self-assembly of supramolecular gelators to selectively kill cells of interest. Polym J. 2020;52:883–9.
Blagden N, de Matas M, Gavan PT, York P. Crystal engineering of active pharmaceutical ingredients to improve solubility and dissolution rates. Adv Drug Deliv Rev. 2007;59:617–30.
Chen J, Sarma B, Evans JMB, Myerson AS. Pharmaceutical crystallization. Cryst Growth Des. 2011;11:887–95.
Diao Y, Helgeson ME, Myerson AS, Hatton TA, Doyle PS, Trout BL. Controlled nucleation from solution using polymer microgels. J Am Chem Soc. 2011;133:3756–9.
Xu S, Dai W-G. Drug precipitation inhibitors in supersaturable formulations. Int J Pharm. 2013;453:36–43.
Mandal T, Huang W, Mecca JM, Getchell A, Porter WW III, Larson RG. A framework for multi-scale simulation of crystal growth in the presence of polymers. Soft Matter. 2017;13:1904–13.
Schneider CA, Rasband WS, Eliceiri KW. NIH Image to ImageJ: 25 years of image analysis. Nat Methods. 2012;9:671–5.
Özdemir C, Güner A. Solubility profiles of poly(ethylene glycol)/solvent systems, I: qualitative comparison of solubility parameter approaches. Eur Polym J. 2007;43:3068–93.
Papanu JS, Soane (Soong) DS, Bell AT, Hess DW. Transport models for swelling and dissolution of thin polymer films. J Appl Polym Sci. 1989;38:859–85.
Sakai T, Matsunaga T, Yamamoto Y, Ito C, Yoshida R, Suzuki S, et al. Design and fabrication of a high-strength hydrogel with ideally homogeneous network structure from tetrahedron-like macromonomers. Macromolecules 2008;41:5379–84.
Matsunaga T, Sakai T, Akagi Y, Chung U, Shibayama M. SANS and SLS studies on tetra-arm PEG gels in as-prepared and swollen states. Macromolecules. 2009;42:6245–52.
Matsunaga T, Sakai T, Akagi Y, Chung U, Shibayama M. Structure characterization of tetra-PEG gel by small-angle neutron scattering. Macromolecules. 2009;42:1344–51.
Sakai T, Katashima T, Matsushita T, Chung U. Sol-gel transition behavior near critical concentration and connectivity. Polym J. 2016;48:629–34.
Hayashi K, Okamoto F, Hoshi S, Katashima T, Zujur DC, Li X, et al. Fast-forming hydrogel with ultralow polymeric content as an artificial vitreous body. Nat Biomed Eng. 2017;1:0044.
Katashima T, Sakurai H, Chung U, Sakai T. Dilution effect on the cluster growth near the gelation threshold. Nihon Reoroji Gakkaishi. 2019;47:61–6.
Yoshikawa Y, Sakumichi N, Chung U, Sakai T. Connectivity dependence of gelation and elasticity in AB-type polymerization: an experimental comparison of the dynamic process and stoichiometrically imbalanced mixing. Soft Matter. 2019;15:5017–25.
Fujinaga I, Yasuda T, Asai M, Chung U, Katashima T, Sakai T. Cluster growth from a dilute system in a percolation process. Polym J. 2020;52:289–97.
Linegar KL, Adeniran AE, Kostko AF, Anisimov MA. Hydrodynamic radius of polyethylene glycol in solution obtained by dynamic light scattering. Colloid J. 2010;72:279–81.
Anwar J, Boateng PK. Computer simulation of crystallization from solution. J Am Chem Soc. 1998;120:9600–4.
Erdemir D, Lee AY, Myerson AS. Nucleation of crystals from solution: classical and two-step models. Acc Chem Res. 2009;42:621–9.
Stenger PC, Isbell SG, Zasadzinski JA. Molecular weight dependence of the depletion attraction and its effects on the competitive adsorption of lung surfactant. Biochim Biophys Acta - Biomembr. 2008;1778:2032–40.
Fuchs M, Schweizer KS. Macromolecular theory of solvation and structure in mixtures of colloids and polymers. Phys Rev E. 2001;64:021514.
Li X, Noritomi T, Sakai T, Gilbert EP, Shibayama M. Dynamics of critical clusters synthesized by end-coupling of four-armed poly(ethylene glycol)s. Macromolecules. 2019;52:5086–94.
Pirttimäki J, Laine E. The transformation of anhydrate and hydrate forms of caffeine at 100% RH and 0% RH. Eur J Pharm Sci. 1994;1:203–8.
Edwards HGM, Lawson E, De Matas M, Shields L, York P. Metamorphosis of caffeine hydrate and anhydrous caffeine. J Chem Soc Perkin Trans. 1997;2:1985–90.
Lehmann CW, Stowasser F. The crystal structure of anhydrous β-caffeine as determined from X-ray powder-diffraction data. Chem Eur J. 2007;13:2908–11.
Shumilin I, Bogoslavsky B, Harries D. Stressing crystals with solutes: effects of added solutes on crystalline caffeine and their relevance to determining transfer free energies. Colloids Surf A Physicochem Eng Asp. 2020;599:124889.
Acknowledgements
This work was supported by the Japan Society for the Promotion of Science (JSPS) KAKENHI, grant number JP20J01280 for YH. YH is grateful to JSPS for the Research Fellowship for Young Scientists. The XRD experiment was performed at SAXS-U (General User Program of Neutron Science Laboratory, Institute for Solid State Physics, The University of Tokyo) located in Ibaraki Quantum Beam Research Center, Tokai, Japan.
Author information
Authors and Affiliations
Corresponding authors
Ethics declarations
Conflict of interest
The authors declare that they have no conflict of interest.
Additional information
Publisher’s note Springer Nature remains neutral with regard to jurisdictional claims in published maps and institutional affiliations.
Supplementary information
Rights and permissions
About this article
Cite this article
Hata, Y., Li, X., Chung, Ui. et al. Molecular crystallization directed by polymer size and overlap under dilute and crowded macromolecular conditions. Polym J 53, 633–642 (2021). https://doi.org/10.1038/s41428-021-00461-7
Received:
Revised:
Accepted:
Published:
Issue Date:
DOI: https://doi.org/10.1038/s41428-021-00461-7
This article is cited by
-
Bioinspired crowding directs supramolecular polymerisation
Nature Communications (2023)