Table 1 Overlap between baseline and DA-stimulated WGCNA modules

From: Dopamine perturbation of gene co-expression networks reveals differential response in schizophrenia for translational machinery

Module color No. genes—baseline No. genes—DA-stimulated Overlap (%)a P-valueb
Black 521 198 97.5 3.4 × 10−322
Blue 270 99 100.0 0c
Brown 194 111 99.1 6.2 × 10−244
Green 127 62 95.2 6.9 × 10−138
Green-Yellow 264 107 86.9 2.1 × 10−171
Magenta 227 65 90.8 3.4 × 10−115
Purpled 74
  1. aPercent of genes in the DA module that overlaps with genes in the respective baseline module
  2. bP-values based on the hypergeometric test, as computed by the R command “overlapTableUsingKME” in the WGCNA package
  3. cHypergeometric P-value too small to be estimated
  4. dAll 74 genes in the purple baseline module were unassigned in the WGCNA results for the DA-stimulated data