Skip to main content

Thank you for visiting nature.com. You are using a browser version with limited support for CSS. To obtain the best experience, we recommend you use a more up to date browser (or turn off compatibility mode in Internet Explorer). In the meantime, to ensure continued support, we are displaying the site without styles and JavaScript.

  • Systematic Review
  • Published:

DNA methylation and histone modifications associated with antipsychotic treatment: a systematic review

Abstract

Antipsychotic medications are essential when treating schizophrenia spectrum and other psychotic disorders, but the efficacy and tolerability of these medications vary from person to person. This interindividual variation is likely mediated, at least in part, by epigenomic processes that have yet to be fully elucidated. Herein, we systematically identified and evaluated 65 studies that examine the influence of antipsychotic drugs on epigenomic changes, including global methylation (9 studies), genome-wide methylation (22 studies), candidate gene methylation (16 studies), and histone modification (18 studies). Our evaluation revealed that haloperidol was consistently associated with increased global hypermethylation, which corroborates with genome-wide analyses, mostly performed by methylation arrays. In contrast, clozapine seems to promote hypomethylation across the epigenome. Candidate-gene methylation studies reveal varying effects post-antipsychotic therapy. Some genes like Glra1 and Drd2 are frequently found to undergo hypermethylation, whereas other genes such as SLC6A4, DUSP6, and DTNBP1 are more likely to exhibit hypomethylation in promoter regions. In examining histone modifications, the literature suggests that clozapine changes histone methylation patterns in the prefrontal cortex, particularly elevating H3K4me3 at the Gad1 gene and affecting the transcription of genes like mGlu2 by modifying histone acetylation and interacting with HDAC2 enzymes. Risperidone and quetiapine, however, exhibit distinct impacts on histone marks across different brain regions and cell types, with risperidone reducing H3K27ac in the striatum and quetiapine modifying global H3K9me2 levels in the prefrontal cortex, suggesting antipsychotics demonstrate selective influence on histone modifications, which demonstrates a complex and targeted mode of action. While this review summarizes current knowledge, the intricate dynamics between antipsychotics and epigenetics clearly warrant more exhaustive exploration with the potential to redefine our understanding and treatment of psychiatric conditions. By deciphering the epigenetic changes associated with drug treatment and therapeutic outcomes, we can move closer to personalized medicine in psychiatry.

This is a preview of subscription content, access via your institution

Access options

Buy this article

Prices may be subject to local taxes which are calculated during checkout

Fig. 1: PRISMA Diagram.
Fig. 2: Summary of global methylation studies results.
Fig. 3: Summary of genome-wide methylation studies results.

Similar content being viewed by others

References

  1. Lally J, MacCabe JH. Antipsychotic medication in schizophrenia: a review. Br Med Bull. 2015;114:169–79.

    Article  CAS  PubMed  Google Scholar 

  2. Kane JM. Addressing side effects from antipsychotic treatment in schizophrenia. J Clin Psychiatry. 2011;72:e07.

    Article  PubMed  Google Scholar 

  3. Bousman CA, Maruf AA, Marques DF, Brown LC, Müller DJ. The emergence, implementation, and future growth of pharmacogenomics in psychiatry: a narrative review. Psychol Med. 2023;53:7983–93.

    Article  PubMed  PubMed Central  Google Scholar 

  4. Abdolmaleky HM, Zhou JR, Thiagalingam S, Smith CL. Epigenetic and pharmacoepigenomic studies of major psychoses and potentials for therapeutics. Pharmacogenomics. 2008;9:1809–23.

    Article  CAS  PubMed  Google Scholar 

  5. Dupont C, Armant DR, Brenner CA. Epigenetics: definition, mechanisms and clinical perspective. Semin Reprod Med. 2009;27:351–7.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  6. Yao B, Christian KM, He C, Jin P, Ming GL, Song H. Epigenetic mechanisms in neurogenesis. Nat Rev Neurosci. 2016;17:537–49.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  7. Illingworth RS, Bird AP. CpG islands-‘a rough guide. FEBS Lett. 2009;583:1713–20.

    Article  CAS  PubMed  Google Scholar 

  8. Jones PA. Functions of DNA methylation: islands, start sites, gene bodies and beyond. Nat Rev Genet. 2012;13:484–92.

    Article  CAS  PubMed  Google Scholar 

  9. Ziller MJ, Gu H, Müller F, Donaghey J, Tsai LT, Kohlbacher O, et al. Charting a dynamic DNA methylation landscape of the human genome. Nature. 2013;500:477–81.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  10. Ng SS, Yue WW, Oppermann U, Klose RJ. Dynamic protein methylation in chromatin biology. Cell Mol Life Sci. 2009;66:407–22.

    Article  CAS  PubMed  Google Scholar 

  11. Bannister AJ, Kouzarides T. Regulation of chromatin by histone modifications. Cell Res. 2011;21:381–95.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  12. Yang XJ, Seto E. HATs and HDACs: from structure, function and regulation to novel strategies for therapy and prevention. Oncogene. 2007;26:5310–8.

    Article  CAS  PubMed  Google Scholar 

  13. Guidotti A, Grayson DR. DNA methylation and demethylation as targets for antipsychotic therapy. Dialogues Clin Neurosci. 2014;16:419–29.

    Article  PubMed  PubMed Central  Google Scholar 

  14. Cha DS, Kudlow PA, Baskaran A, Mansur RB, McIntyre RS. Implications of epigenetic modulation for novel treatment approaches in patients with schizophrenia. Neuropharmacology. 2014;77:481–6.

    Article  CAS  PubMed  Google Scholar 

  15. Page MJ, McKenzie JE, Bossuyt PM, Boutron I, Hoffmann TC, Mulrow CD, et al. The PRISMA 2020 statement: an updated guideline for reporting systematic reviews. BMJ. 2021;372:n71.

    Article  PubMed  PubMed Central  Google Scholar 

  16. Ellingrod VL, Grove TB, Burghardt KJ, Taylor SF, Dalack G. The effect of folate supplementation and genotype on cardiovascular and epigenetic measures in schizophrenia subjects. NPJ Schizophr. 2015;1:15046.

    Article  PubMed  PubMed Central  Google Scholar 

  17. Marques DF, Ota VK, Santoro ML, Talarico F, Costa GO, Spindola LM, et al. LINE-1 hypomethylation is associated with poor risperidone response in a first episode of psychosis cohort. Epigenomics. 2020;12:1041–51.

    Article  CAS  PubMed  Google Scholar 

  18. Melas PA, Rogdaki M, Ösby U, Schalling M, Lavebratt C, Ekström TJ. Epigenetic aberrations in leukocytes of patients with schizophrenia: association of global DNA methylation with antipsychotic drug treatment and disease onset. FASEB J. 2012;26:2712–8.

    Article  CAS  PubMed  Google Scholar 

  19. Burghardt KJ, Goodrich JM, Dolinoy DC, Ellingrod VL. DNA methylation, insulin resistance and second-generation antipsychotics in bipolar disorder. Epigenomics. 2015;7:343–52.

    Article  CAS  PubMed  Google Scholar 

  20. Burghardt KJ, Howlett BH, Sanders E, Dass SE, Msallaty Z, Mallisho A, et al. Skeletal muscle DNA methylation modifications and psychopharmacologic treatment in bipolar disorder. Eur Neuropsychopharmacol. 2019;29:1365–73.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  21. Shimabukuro M, Jinno Y, Fuke C, Okazaki Y. Haloperidol treatment induces tissue- and sex-specific changes in DNA methylation: a control study using rats. Behav Brain Funct. 2006;2:37.

    Article  PubMed  PubMed Central  Google Scholar 

  22. Khan MM, Xiao J, Hollingsworth TJ, Patel D, Selley DE, Ring TL, et al. Gnal haploinsufficiency causes genomic instability and increased sensitivity to haloperidol. Exp Neurol. 2019;318:61–70.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  23. Swathy B, Banerjee M. Haloperidol induces pharmacoepigenetic response by modulating miRNA expression, global DNA methylation and expression profiles of methylation maintenance genes and genes involved in neurotransmission in neuronal cells. PLoS One. 2017;12:e0184209.

    Article  PubMed  PubMed Central  Google Scholar 

  24. Swathy B, Saradalekshmi KR, Nair IV, Nair C, Banerjee M. Understanding the influence of antipsychotic drugs on global methylation events and its relevance in treatment response. Epigenomics. 2018;10:233–47.

    Article  CAS  PubMed  Google Scholar 

  25. Pérez-Aldana BE, Martínez-Magaña JJ, Mayén-Lobo YG, Dávila-Ortiz de Montellano DJ, Aviña-Cervantes CL, Ortega-Vázquez A, et al. Clozapine long-term treatment might reduce epigenetic age through hypomethylation of longevity regulatory pathways genes. Front Psychiatry. 2022;13:870656.

    Article  PubMed  PubMed Central  Google Scholar 

  26. Kinoshita M, Numata S, Tajima A, Yamamori H, Yasuda Y, Fujimoto M, et al. Effect of clozapine on DNA methylation in peripheral leukocytes from patients with treatment-resistant schizophrenia. Int J Mol Sci. 2017;18:632.

  27. Du J, Nakachi Y, Kiyono T, Fujii S, Kasai K, Bundo M, et al. Comprehensive DNA methylation analysis of human neuroblastoma cells treated with haloperidol and risperidone. Front Mol Neurosci. 2021;14:792874.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  28. Kikuchi M, Nakazawa T, Kinoshita M, Yamamori H, Yasuda Y, Fujimoto M, et al. Methylation analysis in monozygotic twins with treatment-resistant schizophrenia and discordant responses to clozapine. Front Psychiatry. 2021;12:734606.

    Article  PubMed  PubMed Central  Google Scholar 

  29. Ma S, de la Fuente Revenga M, Sun Z, Sun C, Murphy TW, Xie H, et al. Cell-type-specific brain methylomes profiled via ultralow-input microfluidics. Nat Biomed Eng. 2018;2:183–94.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  30. Hu M, Xia Y, Zong X, Sweeney JA, Bishop JR, Liao Y, et al. Risperidone-induced changes in DNA methylation in peripheral blood from first-episode schizophrenia patients parallel changes in neuroimaging and cognitive phenotypes. Psychiatry Res. 2022;317:114789.

    Article  CAS  PubMed  Google Scholar 

  31. Murata Y, Nishioka M, Bundo M, Sunaga F, Kasai K, Iwamoto K. Comprehensive DNA methylation analysis of human neuroblastoma cells treated with blonanserin. Neurosci Lett. 2014;563:123–8.

    Article  CAS  PubMed  Google Scholar 

  32. Talarico F, Xavier G, Ota VK, Spindola LM, Maurya PK, Tempaku PF, et al. Aging biological markers in a cohort of antipsychotic-naïve first-episode psychosis patients. Psychoneuroendocrinology. 2021;132:105350.

    Article  CAS  PubMed  Google Scholar 

  33. Li Z, Zong X, Li D, He Y, Tang J, Hu M, et al. Epigenetic clock analysis of blood samples in drug-naive first-episode schizophrenia patients. BMC Psychiatry. 2023;23:45.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  34. Zong X, Wang G, Nie Z, Ma S, Kang L, Zhang N, et al. Longitudinal multi-omics alterations response to 8-week risperidone monotherapy: Evidence linking cortical thickness, transcriptomics and epigenetics. Front Psychiatry. 2023;14:1127353.

    Article  PubMed  PubMed Central  Google Scholar 

  35. Zong X, Zhang J, Li L, Yao T, Ma S, Kang L, et al. Virtual histology of morphometric similarity network after risperidone monotherapy and imaging-epigenetic biomarkers for treatment response in first-episode schizophrenia. Asian J Psychiatr. 2023;80:103406.

    Article  PubMed  Google Scholar 

  36. Sugawara H, Bundo M, Asai T, Sunaga F, Ueda J, Ishigooka J, et al. Effects of quetiapine on DNA methylation in neuroblastoma cells. Prog Neuropsychopharmacol Biol Psychiatry. 2015;56:117–21.

    Article  CAS  PubMed  Google Scholar 

  37. Houtepen LC, van Bergen AH, Vinkers CH, Boks MP. DNA methylation signatures of mood stabilizers and antipsychotics in bipolar disorder. Epigenomics. 2016;8:197–208.

    Article  CAS  PubMed  Google Scholar 

  38. Murata Y, Bundo M, Sunaga F, Kasai K, Iwamoto K. DNA methylation profiling in a neuroblastoma cell line exposed to the antipsychotic perospirone. Pharmacopsychiatry. 2019;52:63–9.

    Article  CAS  PubMed  Google Scholar 

  39. Perzel Mandell KA, Eagles NJ, Deep-Soboslay A, Tao R, Han S, Wilton R, et al. Molecular phenotypes associated with antipsychotic drugs in the human caudate nucleus. Mol Psychiatry. 2022;27:2061–7.

    Article  CAS  PubMed  Google Scholar 

  40. Rukova B, Staneva R, Hadjidekova S, Stamenov G, Milanova V, Toncheva D. Whole genome methylation analyses of schizophrenia patients before and after treatment. Biotechnol Biotechnol Equip. 2014;28:518–24.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  41. Melka MG, Castellani CA, Laufer BI, Rajakumar RN, O’Reilly R, Singh SM. Olanzapine induced DNA methylation changes support the dopamine hypothesis of psychosis. J Mol Psychiatry. 2013;1:19.

    Article  PubMed  PubMed Central  Google Scholar 

  42. Melka MG, Castellani CA, Rajakumar N, O’Reilly R, Singh SM. Olanzapine-induced methylation alters cadherin gene families and associated pathways implicated in psychosis. BMC Neurosci. 2014;15:112.

    Article  PubMed  PubMed Central  Google Scholar 

  43. Melka MG, Laufer BI, McDonald P, Castellani CA, Rajakumar N, O’Reilly R, et al. The effects of olanzapine on genome-wide DNA methylation in the hippocampus and cerebellum. Clin Epigenetics. 2014;6:1.

    Article  PubMed  PubMed Central  Google Scholar 

  44. Melka MG, Castellani CA, O’Reilly R, Singh SM. Insights into the origin of DNA methylation differences between monozygotic twins discordant for schizophrenia. J Mol Psychiatry. 2015;3:7.

    Article  PubMed  PubMed Central  Google Scholar 

  45. Melka MG, Rajakumar N, O’Reilly R, Singh SM. Olanzapine-induced DNA methylation in the hippocampus and cerebellum in genes mapped to human 22q11 and implicated in schizophrenia. Psychiatr Genet. 2015;25:88–94.

    Article  CAS  PubMed  Google Scholar 

  46. Zhou W, Sun J, Huai C, Liu Y, Chen L, Yi Z, et al. Multi-omics analysis identifies rare variation in leptin/PPAR gene sets and hypermethylation of ABCG1 contribute to antipsychotics-induced metabolic syndromes. Mol Psychiatry. 2022;27:5195–205.

    Article  CAS  PubMed  Google Scholar 

  47. Dong E, Nelson M, Grayson DR, Costa E, Guidotti A. Clozapine and sulpiride but not haloperidol or olanzapine activate brain DNA demethylation. Proc Natl Acad Sci USA. 2008;105:13614–9.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  48. Matrisciano F, Tueting P, Dalal I, Kadriu B, Grayson DR, Davis JM, et al. Epigenetic modifications of GABAergic interneurons are associated with the schizophrenia-like phenotype induced by prenatal stress in mice. Neuropharmacology. 2013;68:184–94.

    Article  CAS  PubMed  Google Scholar 

  49. Kho SH, Yee JY, Puang SJ, Han L, Chiang C, Rapisarda A, et al. DNA methylation levels of RELN promoter region in ultra-high risk, first episode and chronic schizophrenia cohorts of schizophrenia. Schizophrenia. 2022;8:81.

    Article  PubMed  PubMed Central  Google Scholar 

  50. Rami FZ, Nguyen TB, Oh YE, Karamikheirabad M, Le TH, Chung YC. Risperidone induced DNA methylation changes in dopamine receptor and stathmin genes in mice exposed to social defeat stress. Clin Psychopharmacol Neurosci. 2022;20:373–88.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  51. Cao YL, Zhu L, Zhang H, Meng JH, Wu HJ, Wang X, et al. Total Barley Maiya alkaloids prevent increased prolactin levels caused by antipsychotic drugs and reduce dopamine receptor D2. Front Pharmacol. 2022;13:888522.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  52. Santoro ML, Ota VK, Stilhano RS, Silva PN, Santos CM, Diana MC, et al. Effect of antipsychotic drugs on gene expression in the prefrontal cortex and nucleus accumbens in the spontaneously hypertensive rat (SHR). Schizophr Res. 2014;157:163–8.

    Article  PubMed  Google Scholar 

  53. Shi Y, Li M, Song C, Xu Q, Huo R, Shen L, et al. Combined study of genetic and epigenetic biomarker risperidone treatment efficacy in Chinese Han schizophrenia patients. Transl Psychiatry. 2017;7:e1170.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  54. Ota VK, Noto C, Gadelha A, Santoro ML, Spindola LM, Gouvea ES, et al. Changes in gene expression and methylation in the blood of patients with first-episode psychosis. Schizophr Res. 2014;159:358–64.

    Article  PubMed  Google Scholar 

  55. Venugopal D, Shivakumar V, Subbanna M, Kalmady SV, Amaresha AC, Agarwal SM. et al. Impact of antipsychotic treatment on methylation status of Interleukin-6 [IL-6] gene in Schizophrenia. J Psychiatr Res. 2018;104:88–95.

    Article  PubMed  Google Scholar 

  56. Ikegame T, Bundo M, Okada N, Murata Y, Koike S, Sugawara H, et al. Promoter activity-based case-control association study on SLC6A4 highlighting hypermethylation and altered amygdala volume in male patients with schizophrenia. Schizophr Bull. 2020;46:1577–86.

    Article  PubMed  PubMed Central  Google Scholar 

  57. Stapel B, Kotsiari A, Scherr M, Hilfiker-Kleiner D, Bleich S, Frieling H, et al. Olanzapine and aripiprazole differentially affect glucose uptake and energy metabolism in human mononuclear blood cells. J Psychiatr Res. 2017;88:18–27.

    Article  PubMed  Google Scholar 

  58. Miura I, Kunii Y, Hino M, Hoshino H, Matsumoto J, Kanno-Nozaki K, et al. DNA methylation of ANKK1 and response to aripiprazole in patients with acute schizophrenia: a preliminary study. J Psychiatr Res. 2018;100:84–7.

    Article  PubMed  Google Scholar 

  59. Nam H, Lee Y, Kim B, Lee JW, Hwang S, An HK, et al. Presenilin 2 N141I mutation induces hyperactive immune response through the epigenetic repression of REV-ERBα. Nat Commun. 2022;13:1972.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  60. Kim SH, Lee HY, Yi H, Ahn YM, Kim YS. Haloperidol induces demethylation and expression of the dual specificity phosphatase 6 gene in MIA PaCa-2 human pancreatic cancer cells. Life Sci. 2012;91:1317–22.

    Article  CAS  PubMed  Google Scholar 

  61. Abdolmaleky HM, Pajouhanfar S, Faghankhani M, Joghataei MT, Mostafavi A, Thiagalingam S. Antipsychotic drugs attenuate aberrant DNA methylation of DTNBP1 (dysbindin) promoter in saliva and post-mortem brain of patients with schizophrenia and Psychotic bipolar disorder. Am J Med Genet B Neuropsychiatr Genet. 2015;168:687–96.

    Article  CAS  PubMed  Google Scholar 

  62. Brivio P, Sbrini G, Tarantini L, Parravicini C, Gruca P, Lason M, et al. Stress modifies the expression of glucocorticoid-responsive genes by acting at epigenetic levels in the rat prefrontal cortex: modulatory activity of lurasidone. Int J Mol Sci. 2021;22:6197.

  63. Huang HS, Matevossian A, Whittle C, Kim SY, Schumacher A, Baker SP, et al. Prefrontal dysfunction in schizophrenia involves mixed-lineage leukemia 1-regulated histone methylation at GABAergic gene promoters. J Neurosci. 2007;27:11254–62.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  64. Kurita M, Holloway T, García-Bea A, Kozlenkov A, Friedman AK, Moreno JL, et al. HDAC2 regulates atypical antipsychotic responses through the modulation of mGlu2 promoter activity. Nat Neurosci. 2012;15:1245–54.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  65. de la Fuente Revenga M, Ibi D, Cuddy T, Toneatti R, Kurita M, Ijaz MK, et al. Chronic clozapine treatment restrains via HDAC2 the performance of mGlu2 receptor agonism in a rodent model of antipsychotic activity. Neuropsychopharmacology. 2019;44:443–54.

    Article  PubMed  Google Scholar 

  66. Okazaki S, Boku S, Otsuka I, Horai T, Kimura A, Shimmyo N, et al. Clozapine increases macrophage migration inhibitory factor (MIF) expression via increasing histone acetylation of MIF promoter in astrocytes. J Psychiatr Res. 2021;135:237–42.

    Article  PubMed  Google Scholar 

  67. Su Y, Liu X, Lian J, Deng C. Epigenetic histone modulations of PPARγ and related pathways contribute to olanzapine-induced metabolic disorders. Pharmacol Res. 2020;155:104703.

    Article  CAS  PubMed  Google Scholar 

  68. Su Y, Deng C, Liu X, Lian J. Epigenetic histone methylation of PPARγ and CPT1A signaling contributes to betahistine preventing olanzapine-induced dyslipidemia. Int J Mol Sci. 2023;24:9143.

  69. Seo MK, Kim YH, McIntyre RS, Mansur RB, Lee Y, Carmona NE, et al. Effects of antipsychotic drugs on the epigenetic modification of brain-derived neurotrophic factor gene expression in the hippocampi of chronic restraint stress rats. Neural Plast. 2018;2018:2682037.

    Article  PubMed  PubMed Central  Google Scholar 

  70. Feiner B, Chase KA, Melbourne JK, Rosen C, Sharma RP. Risperidone effects on heterochromatin: the role of kinase signaling. Clin Exp Immunol. 2019;196:67–75.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  71. Chen X, Liu H, Gan J, Wang X, Yu G, Li T, et al. Quetiapine modulates histone methylation status in oligodendroglia and rescues adolescent behavioral alterations of socially isolated mice. Front Psychiatry. 2019;10:984.

    Article  PubMed  Google Scholar 

  72. Brocos-Mosquera I, Miranda-Azpiazu P, Muguruza C, Corzo-Monje V, Morentin B, Meana JJ, et al. Differential brain ADRA2A and ADRA2C gene expression and epigenetic regulation in schizophrenia. effect of antipsychotic drug treatment. Transl Psychiatry. 2021;11:643.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  73. Dong E, Locci V, Gatta E, Grayson DR, Guidotti A. N-Phthalyl-l-Tryptophan (RG108), like Clozapine (CLO), induces chromatin remodeling in brains of prenatally stressed mice. Mol Pharmacol. 2019;95:62–9.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  74. Montalvo-Ortiz JL, Keegan J, Gallardo C, Gerst N, Tetsuka K, Tucker C, et al. HDAC inhibitors restore the capacity of aged mice to respond to haloperidol through modulation of histone acetylation. Neuropsychopharmacology. 2014;39:1469–78.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  75. Montalvo-Ortiz JL, Fisher DW, Rodríguez G, Fang D, Csernansky JG, Dong H. Histone deacetylase inhibitors reverse age-related increases in side effects of haloperidol in mice. Psychopharmacology (Berl). 2017;234:2385–98.

    Article  CAS  PubMed  Google Scholar 

  76. Khan H, Ni Z, Feng H, Xing Y, Wu X, Huang D, et al. Combination of curcumin with N-n-butyl haloperidol iodide inhibits hepatocellular carcinoma malignant proliferation by downregulating enhancer of zeste homolog 2 (EZH2) - lncRNA H19 to silence Wnt/β-catenin signaling. Phytomedicine. 2021;91:153706.

    Article  CAS  PubMed  Google Scholar 

  77. Rodriguez G, Fisher DW, McClarty B, Montalvo-Ortiz J, Cui Q, Chan CS, et al. Histone deacetylase inhibitors mitigate antipsychotic risperidone-induced motor side effects in aged mice and in a mouse model of Alzheimer’s disease. Front Psychiatry. 2022;13:1020831.

    Article  PubMed  Google Scholar 

  78. McClarty B, Rodriguez G, Dong H. Dose effects of histone deacetylase inhibitor tacedinaline (ci-994) on antipsychotic haloperidol-induced motor and memory side effects in aged mice. Front Neurosci. 2021;15:674745.

    Article  PubMed  PubMed Central  Google Scholar 

  79. Li J, Guo Y, Schroeder FA, Youngs RM, Schmidt TW, Ferris C, et al. Dopamine D2-like antagonists induce chromatin remodeling in striatal neurons through cyclic AMP-protein kinase A and NMDA receptor signaling. J Neurochem. 2004;90:1117–31.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  80. Bharadwaj R, Jiang Y, Mao W, Jakovcevski M, Dincer A, Krueger W, et al. Conserved chromosome 2q31 conformations are associated with transcriptional regulation of GAD1 GABA synthesis enzyme and altered in prefrontal cortex of subjects with schizophrenia. J Neurosci. 2013;33:11839–51.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  81. Shen L, Song CX, He C, Zhang Y. Mechanism and function of oxidative reversal of DNA and RNA methylation. Annu Rev Biochem. 2014;83:585–614.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  82. Bian C, Yu X. PGC7 suppresses TET3 for protecting DNA methylation. Nucleic Acids Res. 2014;42:2893–905.

    Article  CAS  PubMed  Google Scholar 

  83. Klengel T, Pape J, Binder EB, Mehta D. The role of DNA methylation in stress-related psychiatric disorders. Neuropharmacology. 2014;80:115–32.

    Article  CAS  PubMed  Google Scholar 

  84. Abdolmaleky HM, Smith CL, Faraone SV, Shafa R, Stone W, Glatt SJ, et al. Methylomics in psychiatry: modulation of gene-environment interactions may be through DNA methylation. Am J Med Genet B Neuropsychiatr Genet. 2004;127B:51–9.

    Article  PubMed  Google Scholar 

  85. Meier K, Recillas-Targa F. New insights on the role of DNA methylation from a global view. Front Biosci. 2017;22:644–68.

    Article  CAS  Google Scholar 

  86. Grayson DR, Guidotti A. The dynamics of DNA methylation in schizophrenia and related psychiatric disorders. Neuropsychopharmacology. 2013;38:138–66.

    Article  CAS  PubMed  Google Scholar 

  87. Kiltschewskij DJ, Reay WR, Geaghan MP, Atkins JR, Xavier A, Zhang X, et al. Alteration of DNA methylation and epigenetic scores associated with features of schizophrenia and common variant genetic risk. Biol Psychiatry. 2024;95:647–61.

    Article  CAS  PubMed  Google Scholar 

  88. Howes OD, McCutcheon R, Agid O, de Bartolomeis A, van Beveren NJ, Birnbaum ML. et al. Treatment-resistant schizophrenia: treatment response and resistance in psychosis (TRRIP) working group consensus guidelines on diagnosis and terminology. Am J Psychiatry. 2017;174:216–29.

    Article  PubMed  Google Scholar 

  89. Lee SE, Lee Y, Lee GH. The regulation of glutamic acid decarboxylases in GABA neurotransmission in the brain. Arch Pharm Res. 2019;42:1031–9.

    Article  CAS  PubMed  Google Scholar 

  90. Wasser CR, Herz J. Reelin: neurodevelopmental architect and homeostatic regulator of excitatory synapses. J Biol Chem. 2017;292:1330–8.

    Article  CAS  PubMed  Google Scholar 

  91. Gressier F, Porcelli S, Calati R, Serretti A. Pharmacogenetics of clozapine response and induced weight gain: a comprehensive review and meta-analysis. Eur Neuropsychopharmacol. 2016;26:163–85.

    Article  CAS  PubMed  Google Scholar 

  92. Dong E, Tueting P, Matrisciano F, Grayson DR, Guidotti A. Behavioral and molecular neuroepigenetic alterations in prenatally stressed mice: relevance for the study of chromatin remodeling properties of antipsychotic drugs. Transl Psychiatry. 2016;6:e711.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  93. Hannon E, Dempster EL, Mansell G, Burrage J, Bass N, Bohlken MM, et al. DNA methylation meta-analysis reveals cellular alterations in psychosis and markers of treatment-resistant schizophrenia. Elife. 2021;10:e58430.

  94. Pradeepa MM, Grimes GR, Kumar Y, Olley G, Taylor GC, Schneider R, et al. Histone H3 globular domain acetylation identifies a new class of enhancers. Nat Genet. 2016;48:681–6.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  95. Sharma A, Jamil MA, Nuesgen N, Dauksa A, Gulbinas A, Schulz WA, et al. Detailed methylation map of LINE-1 5’-promoter region reveals hypomethylated CpG hotspots associated with tumor tissue specificity. Mol Genet Genomic Med. 2019;7:e601.

    Article  PubMed  PubMed Central  Google Scholar 

  96. Levin R, Calzavara MB, Santos CM, Medrano WA, Niigaki ST, Abílio VC. Spontaneously hypertensive rats (SHR) present deficits in prepulse inhibition of startle specifically reverted by clozapine. Prog Neuropsychopharmacol Biol Psychiatry. 2011;35:1748–52.

    Article  CAS  PubMed  Google Scholar 

  97. Niigaki ST, Peres FF, Ferreira L, Libanio T, Gouvea DA, Levin R, et al. Young spontaneously hypertensive rats (SHRs) display prodromal schizophrenia-like behavioral abnormalities. Prog Neuropsychopharmacol Biol Psychiatry. 2019;90:169–76.

    Article  PubMed  Google Scholar 

  98. Dong E, Dzitoyeva SG, Matrisciano F, Tueting P, Grayson DR, Guidotti A. Brain-derived neurotrophic factor epigenetic modifications associated with schizophrenia-like phenotype induced by prenatal stress in mice. Biol Psychiatry. 2015;77:589–96.

    Article  CAS  PubMed  Google Scholar 

  99. Inta D, Monyer H, Sprengel R, Meyer-Lindenberg A, Gass P. Mice with genetically altered glutamate receptors as models of schizophrenia: a comprehensive review. Neurosci Biobehav Rev. 2010;34:285–94.

    Article  CAS  PubMed  Google Scholar 

  100. Gordon JA. Testing the glutamate hypothesis of schizophrenia. Nat Neurosci. 2010;13:2–4.

    Article  CAS  PubMed  Google Scholar 

  101. Kelly MP, Stein JM, Vecsey CG, Favilla C, Yang X, Bizily SF, et al. Developmental etiology for neuroanatomical and cognitive deficits in mice overexpressing Galphas, a G-protein subunit genetically linked to schizophrenia. Mol Psychiatry. 2009;14:398–415.

    Article  CAS  PubMed  Google Scholar 

Download references

Acknowledgements

This project was funded, in part, by Alberta Innovates Doctoral Scholarship (DM). The authors would like to thank Dr. Myriam Hemberger and Dr. Wendy Dean for constructive criticism.

Author information

Authors and Affiliations

Authors

Contributions

DM, CB, and SG contributed to the study conception. The retrieved records were independently reviewed by two authors (DM, NV). If there was a disagreement, a third author (CB) reviewed the article, and a consensus was reached. The initial draft of the manuscript was written by DM. CB and SG helped in the revisions. All authors read and approved the final manuscript.

Corresponding author

Correspondence to Chad Bousman.

Ethics declarations

Competing interests

CB is the founder of Sequence2Script Inc. All other authors have nothing to disclose.

Additional information

Publisher’s note Springer Nature remains neutral with regard to jurisdictional claims in published maps and institutional affiliations.

Supplementary information

Rights and permissions

Springer Nature or its licensor (e.g. a society or other partner) holds exclusive rights to this article under a publishing agreement with the author(s) or other rightsholder(s); author self-archiving of the accepted manuscript version of this article is solely governed by the terms of such publishing agreement and applicable law.

Reprints and permissions

About this article

Check for updates. Verify currency and authenticity via CrossMark

Cite this article

Marques, D., Vaziri, N., Greenway, S.C. et al. DNA methylation and histone modifications associated with antipsychotic treatment: a systematic review. Mol Psychiatry (2024). https://doi.org/10.1038/s41380-024-02735-x

Download citation

  • Received:

  • Revised:

  • Accepted:

  • Published:

  • DOI: https://doi.org/10.1038/s41380-024-02735-x

Search

Quick links