Abstract
Development of a novel agent against life-threatening sepsis requires the in-depth understanding of the relevant pathophysiology and therapeutic targets. Given the function of microRNAs (miRNAs) as potent oligonucleotide therapeutics, here we investigated the pathophysiological role of exogenously applied miRNA in sepsis-induced multiple organ injury. In vitro, miR-16, miR-126, miR-146a, and miR-200b suppressed the production of pro-inflammatory cytokines in RAW264.7 macrophage cells after lipopolysaccharide (LPS) stimulation. Of these, miR-146a displayed the most highly suppressive effect, wherein the transcriptional activity of nuclear factor kappa B (NF-κB) was decreased via targeting of interleukin 1 receptor-associated kinase 1 and tumor necrosis receptor-associated factor 6. Sepsis was induced in mice via cecal ligation and puncture (CLP) and an intravenous injection of a complex of miR-146a-expressing plasmid and polyethyleneimine. Treatment with this complex significantly decreased the level of serum inflammatory cytokines, attenuated organ injury including kidney injury, and led to increased survival from polymicrobial sepsis induced by CLP. miR-146a-expressing plasmid was abundantly distributed in splenic macrophages, but not in renal parenchymal cells. CLP mice treated with miR-146a displayed significantly decreased NF-κB activation and splenocyte apoptosis. Splenectomy diminished the anti-inflammatory effects of miR-146a. The collective results support the conclusion that the induction of miR-146a expression in splenic macrophages prevents excessive inflammation and sepsis-induced multiple organ injury. This study establishes a novel and critical pathophysiological role for splenic macrophage interference in sepsis-related organ injury.
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Introduction
Sepsis is a life-threatening organ dysfunction caused by an uncontrolled host response to infection. Sepsis is a major cause of morbidity and mortality in the intensive care unit (ICU) [1]. Sepsis-related mortality rates are high in patients with multiple organ failure [2]. Prior to the onset of sepsis, bacteria or bacterial products penetrate external barriers, such as the epithelium. The next line of defense is the reticuloendothelial system comprising the liver, lymph node, bone marrow, and spleen, which is pivotal in innate immunity. The response of the host defense system to bacterial invasion results in the immediate activation of innate immunity, but an excessive immune response may cause a hyper-inflammatory cytokine storm, multiple organ failure, and even death [3, 4]. The Toll-like receptor (TLR)/nuclear factor kappa B (NF-κB) system is crucial in the pathogenesis of sepsis. TLR-mediated signaling leads to the formation of a complex between interleukin (IL)-1R-associated kinase 4 (IRAK-4) and tumor necrosis factor receptor-associated factor 6 (TRAF6), which leads to the phosphorylation of inhibitory κ-B (IκB). This reaction facilitates the NF-κB-mediated activation of the transcription of pro-inflammatory mediators in the nucleus [5,6,7,8]. In septic conditions, dysregulated NF-κB activity induces a cytokine storm, which results in multiple organ failure [9].
MicroRNAs (miRNAs) are non-coding RNAs that are approximately 20–30 nucleotides in length. They bind to the 3ˈ untranslated region of target mRNAs, resulting in translational repression or mRNA degradation [10]. Animal studies and clinical trials have demonstrated that the modulation of miRNA expression may be beneficial in several diseases [11,12,13]. Thus, miRNAs have attracted a great deal of attention as a new class of oligonucleotide-based therapeutics. miR-146a is induced by NF-κB and acts as a negative feedback regulator of the pro-inflammatory response through the inhibition of TRAF6 and IRAK-1/2 [14,15,16,17].
Here, we investigated the pathophysiological role of exogenously applied miR-146a in the attenuation of sepsis-induced hyper-inflammatory states and multiple organ injury. The results demonstrate that the spleen, particularly splenic macrophages, governs the hierarchy of organs in the pathogenesis of sepsis, suggesting that the spleen may be the ideal target in the treatment of sepsis.
Methods
miRNA reagents and miRNA-expressing plasmid
MiRNA mimics and a randomly sequenced miRNA negative control were purchased from Life Technologies (Carlsbad, CA, USA). The sequences are described in Supplemental Table 1. miRNA- and enhanced green fluorescent protein (EGFP)-expressing plasmid was purchased from Cell Biolabs, Inc. (San Diego, CA, USA). The miRNA precursor and empty (control) plasmid sequences are listed in Supplemental Table 2A and B.
Animal model of sepsis
This study was approved by the Institutional Animal Care and Use Committee of Nagoya University School of Medicine (protocol number 29342) and was performed in accordance with the animal experimentation guidelines of Nagoya University School of Medicine. Male C57BL/6 mice, 10-12-weeks old (Chubu Kagaku Shizai, Nagoya, Japan) were subjected to polymicrobial sepsis via cecal ligation and puncture (CLP) surgery as previously described (Fig. S1) [18]. Briefly, under isoflurane anesthesia, a 5-mm incision was made in the left abdomen. The cecum was exposed, ligated 10 mm from the tip, and punctured once with a 21-gauge needle, followed by gentle squeezing to remove the cecal contents. The abdominal incision was closed in two layers using 5-0 silk sutures. Sham-operated mice were subjected to the same surgical laparotomy, but the cecum was not ligated or punctured. Survival was assessed every 6 h after surgery, and blood samples were collected 24 h post-surgery by puncture of the inferior vena cava. Organs were fixed using standard methods [19].
In vitro delivery of miRNA
RAW264.7 macrophage cells were cultured in six-well plates using low glucose Dulbecco’s modified Eagle’s medium (Takara Bio, Shiga, Japan) containing 10% fetal bovine serum (Life Technologies) at 37 °C in an atmosphere of 5% CO2. Cells were transfected with miR-146a mimics (50 nM) or a negative control using Lipofectamine 2000 reagent (Invitrogen, Tokyo, Japan). Cells were stimulated for 24 h post-transfection with 1 mg/mL of lipopolysaccharide (LPS) (Sigma-Aldrich, Tokyo, Japan) for 30 min for the examination of NF-κB transcriptional activity, or 6 h for the assessment of cytokine production and analysis of IRAK-1 and TRAF6 levels.
In vivo delivery of plasmid DNA
For plasmid delivery, linear polyethyleneimine (PEI) nanoparticles (in vivo-jetPEI®) purchased from Polyplus-transfection SA (Illkirch-Graffenstaden, France) were used. Plasmid/PEI complex was prepared as previously described and injected into mice via the tail vein 7 days before surgery [20].
Ex vivo imaging
Mice were sacrificed 7 days after the plasmid injection. Fresh organs were collected and placed in the IVIS Spectrum in vivo imaging system (PerkinElmer, Waltham, MA, USA). EGFP was excited at 465 nm and detected at 520 nm and data were collected as photon·sec·−1cm−2.
Histological analysis
Organs were fixed in 4% paraformaldehyde, embedded in paraffin, cut into 4 µm thick sections, and stained with periodic acid-Schiff reagent [21]. Renal tubular injury was evaluated as tubular epithelial swelling, brush border loss, vacuolar degeneration, tubule necrosis, cast formation, and desquamation. The degree of kidney damage was estimated at 400 × magnification using five randomly selected fields for each animal [22].
Immunostaining was performed using antibodies against cleaved caspase-3 (Cell Signaling Technology, Danvers, MA, USA), Ly6B (Bio-Rad, Hercules, CA, USA), EGFP (Abcam, Cambridge, MA, USA), neutrophil gelatinase-associated lipocalin (NGAL; Abcam), and CD68 (Bio-Rad) according to the manufacturers’ protocols. Histological evaluations were performed by two blinded observers. TdT-mediated dUTP nick and label (TUNEL) staining was performed using an in situ Apoptosis Detection Kit (Takara Bio) according to the manufacturer’s protocol.
Blood biochemical analyses
Blood urea nitrogen (BUN), creatinine (Cre), aspartate aminotransferase (AST), alanine aminotransferase (ALT), and lactate dehydrogenase (LDH) levels in serum were measured using an automated chemistry analyzer (LSI Medience, Tokyo, Japan).
Reverse transcription polymerase chain reaction (RT-PCR)
Target miRNA was reverse-transcribed using a TaqMan MicroRNA Reverse Transcription Kit (Applied Biosystems, Carlsbad, CA, USA). Target genes were amplified by real-time PCR with a Step One Plus Real-Time PCR System (Applied Biosystems) with all samples assayed in duplicate. Quantitative evaluation of target gene expression was performed using the ΔΔCT method. mRNA expression was normalized to β-actin expression, while miRNA expression was normalized to U6 snRNA expression. Primer sequences can be provided upon request.
Transcriptional activity assay
The activity of NF-κB was quantified using a TransAM NF-κB p65 Transcription Factor Assay Kit (Active Motif, Carlsbad, CA, USA), according to the manufacturer’s recommendation. Optical density (OD) values for the peroxidase reaction product from each sample were normalized to those of 2.5 µg of Jurkat nuclear extract provided as a positive control. The activity of activator protein-1 (AP-1) was quantified using a TransAM AP-1 Transcription Factor Assay Kit (Active Motif), according to the manufacturer’s recommendation. OD values for the peroxidase reaction product from each sample were normalized to those of 5 µg of K-562 nuclear extract provided as a positive control.
Enzyme-linked immunosorbent assay (ELISA)-based cytokine assay
Levels of cytokines (tumor necrosis factor-alpha [TNF-α], IL-6, and monocyte chemoattractant protein 1 [MCP-1]) were measured using a Quantikine ELISA Kit (R&D Systems, Minneapolis, MN, USA) and all samples were assayed in duplicate.
Western blot analysis
Western blot analysis was performed as previously described [21]. The primary antibodies used were rabbit anti-mouse IRAK-1 (sc-7883; Santa Cruz Biotechnology, Dallas, TX), TRAF6 antibody (sc-7221, Santa Cruz Biotechnology), or mouse anti-β-actin antibody (Sigma-Aldrich).
Statistics
Data are expressed as mean ± standard error (SE) and significant differences with respect to the interactive effects were analyzed using one-way ANOVA and Tukey’s test, respectively. Statistical significance between the two groups was determined by a two-tailed Student’s t-test. The log-rank test was used to compare group survival trends. A p-value < 0.05 was considered statistically significant. GraphPad Prism ver.8 (GraphPad Software, San Diego, CA, USA) was used for all statistical analyses.
Results
Monocytes overexpressing miR-146a are tolerant of the LPS-induced inflammatory response
We tested the anti-inflammatory effects of miR-16, miR-126, miR-146a, and miR-200b, which are all considered negative regulators of the TLR/NF-κB pathway (Fig. 1a) [23,24,25,26]. RAW264.7 cells were transfected with the miRNA mimics or a negative control and then treated with 1 mg/mL of LPS for 6 h. miR-146a displayed the highest suppressive effect among all the miRNAs tested as evident by the decreased TNF-α and IL-6 production (Fig. 1b, c).
miR-146a decreases transcriptional activity of NF-κB and AP-1 by targeting IRAK-1 and TRAF6
Next, we explored the role of miR-146a in the regulation of the TLR/NF-κB pathway. Enhancement in miR-146a expression resulted in the negative regulation of the expression of IRAK-1 and TRAF6 in RAW264.7 cells (Fig. 1d–f). In addition, we evaluated the activity of NF-κB and AP-1 after treatment with 1 mg/mL LPS and found that miR-146a significantly attenuated NF-κB and AP-1 activity as compared to the negative control (Fig. 1g, h). The data indicated that miR-146a inhibits LPS-induced inflammatory response by targeting IRAK-1 and TRAF6.
miR-146a-expressing plasmid improves survival after CLP
We explored whether miR-146a alters sepsis-induced mortality and organ dysfunction in septic mice using a miR-146a-expressing plasmid that also encoded EGFP (Fig. S2A). We injected the miR-146a-expressing plasmid/PEI complex into mice via tail veins (miR-146a plasmid group). As a negative control, an empty plasmid/PEI complex was injected (empty plasmid group) (Fig. S2B). Prior to the induction of sepsis, we checked for organ toxicity in mice injected with plasmid/PEI and found no evidence of renal or liver toxicity (S-Fig. 3A-E). Seven days after the injection, mice were subjected to polymicrobial sepsis via CLP surgery (Fig. 2a). The survival rate was better in the miR-146a group than in the non-treated group and empty plasmid group (Fig. 2b), suggesting that miR-146a may attenuate the severity of CLP-induced sepsis.
miR-146a-expressing plasmid prevents sepsis-induced organ failure and inflammatory cytokine production
Serum BUN, Cre, AST, ALT, and LDH levels were measured 24 h after CLP. In the non-treated and empty plasmid groups, these parameters were significantly elevated, consistent with previously reported results [27,28,29]. However, a significant reduction in these parameters was observed in mice treated with miR-146a plasmid (Fig. 2c–g). In addition, serum TNF-α, IL-6, and MCP-1 levels were measured at 6 h and 24 h after CLP. Serum cytokine levels were slightly, but not significantly, elevated in the CLP groups at 6 h. In contrast and consistent with the results of organ damage assessment, the inflammatory cytokine levels were significantly suppressed 24 h after CLP in the miR-146a plasmid group compared to the non-treated and empty plasmid groups (Fig. 2h–j). When the plasmid/PEI complex was injected just following the CLP procedure, the inflammatory response was not attenuated in the miR-146a group, which displayed the same poor survival outcome as other groups (Fig. S4A-D).
Plasmid/PEI complex is mainly distributed in splenic macrophages
To evaluate the distribution of the plasmid/PEI complex, we first performed ex vivo imaging (Fig. 3a) and detected EGFP signal in the lung, liver, kidney, and spleen. The signal was most intense in the spleen. Next, we evaluated EGFP expression in the lung, liver, spleen, and kidney by immunohistochemistry (Fig. 3b). The number of EGFP+ cells was significantly higher in the spleen than in other organs (Fig. 3c). Although we observed localization of EGFP+ cells in the liver and lungs, the signal was much weaker than that observed in the spleen. These data suggested that the injected plasmid/PEI complex is mainly distributed in the spleen. Thus, we used spleen samples for further analyses [30].
To confirm the localization of the plasmid in the spleen, we stained splenic tissues with an anti-CD68 antibody and observed the co-localization of EGFP and CD68+ macrophages (Fig. 4a, b). The similar result was observed in the liver (Fig. S5A, B). Next, we isolated F4/80+ cells from splenic cell suspensions and found that miR-146a expression was increased in F4/80+ cells (Fig. 4c). In contrast, F4/80− cells failed to show miR-146a overexpression (Fig. 4c). A similar result was observed in CD11b+ cells (Fig. 4d). Additionally, F4/80+ cells and CD11b+ cells expressed EGFP in the miR-146a plasmid group and the empty plasmid group (Fig. 4e, f). These data strongly suggested that the plasmid/PEI complex is mainly distributed in splenic macrophages, where it has a functional role.
In addition, we evaluated inflammatory cytokine levels and NF-κB activity in the spleen. IL-6 level was significantly decreased in the miR-146a plasmid group 24 h after CLP compared to the empty plasmid-treated and non-treated CLP groups (Fig. 5a). In the miR-146a plasmid group, NF-κB activity was attenuated at 6 h after CLP as compared with the empty plasmid group (Fig. 5b). Next, we performed immunostaining for cleaved caspase-3 and TUNEL staining, and observed fewer cleaved caspase-3 or TUNEL-positive cells in the miR-146a plasmid group than in the empty plasmid and the non-treated CLP groups (Fig. 5c–e). These results indicated that miR-146a-expressing plasmid attenuated the pro-inflammatory pathway but also the pro-apoptotic pathway activated by CLP.
Renal damage induced by sepsis is prevented by miR-146a
We investigated the effect of miR-146a against sepsis-induced acute kidney injury, which is one of the most frequent and fatal complications in clinical sepsis [2]. Twenty-four h after CLP, renal tubular damage was less severe in the miR-146a plasmid group than in the non-treated CLP and empty plasmid groups (Fig. 6A-a-d, B). In particular, tubular vacuolization, a unique finding in the damaged renal tissue attributed to sepsis, was less prominent in the miR-146a plasmid group [31]. In addition, tubular injury was also evaluated by immunostaining of neutrophil gelatinase-associated lipocalin (NGAL). Fewer NGAL-positive tubules were observed in the miR-146a plasmid group compared with non-treated CLP and empty plasmid groups (Fig. 6A-e-h, C). We also found less Ly6B+ monocyte infiltration in the miR-146a plasmid group than in the non-treated CLP and empty plasmid groups (Fig. 6A-i-l, D).
Consistent with these findings, IL-6 production was decreased in the kidneys of mice from the miR-146a plasmid group (Fig. 6e). EGFP fluorescence and miR-146a overexpression were not observed in any of the groups (Figs. 3B and 6F). Furthermore, the infiltration of Ly6B+ macrophages in the liver and lung tissues was less severe in the miR-146a group than in the non-treated CLP and empty plasmid groups in spite of the rare EGFP fluorescence (Fig. S6A-D). These results suggested that the attenuation of organ injury, including renal damage after CLP, is caused by the indirect effects of the miR-146a/PEI complex distributed in splenic macrophages.
Anti-inflammatory effects of miR-146a are not observed in splenectomized mice
To evaluate the importance of splenic induction of miR-146a expression in the septic state, we investigated whether miR-146a expression plasmid was effective in splenectomized mice. Splenectomy was performed 7 days prior to plasmid injection, and the mice were subjected to CLP 7 days after injection (Fig. 7a). The miR-146a-CLP group showed no improvement in survival upon splenectomy (Fig. 7b). Furthermore, no differences were evident in serum BUN, Cre, AST, ALT, and LDH levels 24 h after CLP among the splenectomized CLP groups (Fig. 7c–g). In addition, serum levels of IL-6, TNF-α, and MCP-1 increased in all splenectomized CLP groups (Fig. 7h–j). These data indicated that the miR-146a-PEI injection produces an anti-inflammatory effect in the presence of the spleen.
Discussion
Here, we revealed a novel and critical pathophysiologic role of splenic macrophage interference in sepsis-induced organ injury using the miR-146a-expressing plasmid/PEI complex. The mixture of miR-146a and PEI achieved specific and local transfection of miR-146a into splenic macrophages and led to the attenuation of sepsis-induced cytokine storm, mortality, and multiple organ injury, including acute kidney injury (Fig. 7k).
In addition, we revealed the possible mechanisms underlying the benefit of miR-146a in sepsis-induced organ injury. Signals from TLRs, such as TLR4, activate the NF-κB pathway as part of the complex intracellular signal transduction that occurs in the pathogenesis of sepsis [32]. Presently, miR-146a modulated the transcriptional activity of NF-κB by regulating IRAK-1 and TRAF6 (Fig. 1d–g). Thus, miR-146a has an anti-inflammatory role by regulating NF-κB. Consequently, our results indicate that miR-146a attenuates NF-κB-mediated excessive inflammation due to sepsis.
Improvement in the outcomes for patients with sepsis necessitates a firm understanding of the pathophysiology involved and requires the discovery of novel drug targets [33]. In this context, this study provides three important findings. First, the spleen, particularly splenic macrophages, is the key component that governs sepsis-induced multiple organ injury. Following PEI administration, we observed a strong distribution of miR-146a-expressing plasmid in the spleen, while immune responses were strikingly suppressed in many organs, including the kidney, liver, lung, and spleen. Our findings are supported by previous reports of the copious production of cytokines by the reticuloendothelial system, with a response that develops earlier in the spleen than in other organs [27, 34]. The spleen is, therefore, one of the most crucial organs among the mononuclear phagocyte systems [35]. It is conceivable that the main target of the miR-146a-expressing plasmid/PEI complex was the spleen, resulting in the efficient suppression of the cytokine storm (Fig. 7k). No immunomodulation agents (including gene therapy) against sepsis-induced organ injury are currently available. Hence, our strategy to treat splenic macrophages with specific miRNA may serve as a novel therapeutic option in the attenuation of the pathogenesis of sepsis-induced organ injury, including acute kidney injury [36, 37].
Second, this study reveals that miR-146a induction may be a potent therapeutic option for the treatment of sepsis-induced multiple organ injury. We identified a number of miRNAs as possible therapeutic agents (summarized in Fig. 1a), and found that miR-146a exhibited the strongest effect in the suppression of LPS-induced immune responses. The data provide an insight into the mechanisms underlying sepsis-induced multiple organ injury. The understanding of the exact pathogenesis of sepsis is still incomplete. Sepsis-induced death is hypothesized to be the result of either persistent immune activation with accompanying inflammation and organ failure or immunosuppression and secondary infection during the late phase of sepsis [4]. In the latter situation, immunosuppression is thought to be caused by apoptosis and depletion of immune cells [38, 39]. In the present study, while miR-146a itself had an immunosuppressive effect, it definitely attenuated the apoptosis of splenocytes, which may mean miR-146a maintained the spleen in a healthy condition. This observation was consistent with previous reports, wherein severe sepsis patients showed apoptosis of splenic cells in clinic and miR-146a showed anti-apoptosis effects in experimental settings [40,41,42]. We observed that the activity of AP-1, which is a pro-apoptotic signal, was significantly reduced in the spleen after CLP. The observations may partly explain the mechanism of protection of the miR-146a plasmid group from splenic apoptosis. We speculate that the induction of miR-146a in the spleen may be beneficial effects in both the early and late phases of sepsis.
Third, this study raises the possibility of an intriguing therapeutic strategy for sepsis through the combination of miR-146a and PEI. Although investigations into new miRNA agents for clinical use have made great progress, no clinical trials for the treatment of sepsis with miRNA agents have been done [43,44,45]. A miR-146a-expressing plasmid was shown to improve sepsis-related mortality rates and the severity of multiple organ injury. In addition, we revealed that the major distribution site of the plasmid/PEI complex was the spleen and that miR-146a overexpression and EGFP signal were rarely observed in the kidney, lung, liver, and bone marrow. The spleen plays a defensive role against infection, but an excessive immune response in the spleen induces the systemic inflammation and multiple organ failure that are the hallmarks of sepsis. In the present study, exogenous miR-146a transfected into the spleen likely regulated the CLP-induced immune response in mice and prevented lethal sepsis. Furthermore, our data suggest that PEI may be a useful material for the delivery of therapeutic agents to splenic macrophages. We also found that the beneficial effects of miR-146a were absent in splenectomized mice. This is likely attributed to the attenuated effect of miR-146a following the removal of its main target, the spleen. This observation provides the evidence that the injected plasmid worked in the spleen and was responsible for the suppression of the cytokine storm.
There are some limitations of the present study. First, the injected plasmid/PEI complex could not improve the outcome if injected after the onset of sepsis (Fig. S4). That may have been because of the requirement of the initial duration for transcription and maturation of the miRNA. Thus, the plasmid/PEI complex could not act immediately. Further studies are needed to establish a strategy, wherein the treatment inception occurs after the onset of sepsis. In addition, there is a possibility that splenectomy itself increased the severity of sepsis [46]. Therefore, the effect of miR-146a was impaired.
In conclusion, we demonstrate that miR-146a induction in splenic macrophages leads to the attenuation of sepsis-induced excessive inflammation, mortality rate, and severity of organ injury. The findings established a novel pathophysiologic role for splenic macrophage interference in sepsis-related organ injury, by using a specific combination of miRNA and PEI-based drug delivery system.
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We thank Norihiko Suzuki, Naoko Asano, and Yuriko Sawa for their excellent technical assistance. We thank Editage (www.editage.jp) for the editing of the manuscript.
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This work was supported in part by a Grant-in-Aids for Scientific Research (16K09610) and a 2015 research grant from the Aichi Kidney Foundation. Funders had no role in this study.
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Funahashi, Y., Kato, N., Masuda, T. et al. miR-146a targeted to splenic macrophages prevents sepsis-induced multiple organ injury. Lab Invest 99, 1130–1142 (2019). https://doi.org/10.1038/s41374-019-0190-4
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DOI: https://doi.org/10.1038/s41374-019-0190-4
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