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Chromatin-enriched lncRNAs: a novel class of enhancer RNAs

Long noncoding (lnc)RNAs are postulated to control diverse biological processes by modulating transcription, yet for most lncRNAs evidence supporting this function has been lacking. A new report describes the role of a novel class of lncRNAs—chromatin-associated enhancer RNAs or cheRNAs—in the regulation of proximal gene expression.

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Figure 1: A schematic of cheRNA function.

References

  1. Deveson, I.W., Hardwick, S.A., Mercer, T.R. & Mattick, J.S. Trends Genet. 33, 464–478 (2017).

    Article  CAS  Google Scholar 

  2. Liu, G., Mattick, J.S. & Taft, R.J. Cell Cycle 12, 2061–2072 (2013).

    Article  CAS  PubMed Central  Google Scholar 

  3. Cabili, M.N. et al. Genes Dev. 25, 1915–1927 (2011).

    Article  CAS  PubMed Central  Google Scholar 

  4. Derrien, T. et al. Genome Res. 22, 1775–1789 (2012).

    Article  CAS  PubMed Central  Google Scholar 

  5. Kapranov, P. et al. Science 296, 916–919 (2002).

    Article  CAS  Google Scholar 

  6. Kapranov, P. et al. Genome Res. 15, 987–997 (2005).

    Article  CAS  PubMed Central  Google Scholar 

  7. Djebali, S. et al. Nature 489, 101–108 (2012).

    Article  CAS  PubMed Central  Google Scholar 

  8. Lai, F. et al. Nature 494, 497–501 (2013).

    Article  CAS  PubMed Central  Google Scholar 

  9. Gayen, S., Maclary, E., Buttigieg, E., Hinten, M. & Kalantry, S. Cell Rep. 11, 1251–1265 (2015).

    Article  CAS  PubMed Central  Google Scholar 

  10. Gayen, S., Maclary, E., Hinten, M. & Kalantry, S. Proc. Natl. Acad. Sci. USA 113, E309–E318 (2016).

    Article  CAS  Google Scholar 

  11. Schmitt, A.M. & Chang, H.Y. Cold Spring Harb. Perspect. Med. http://dx.doi.org/10.1101/cshperspect.a026492 (2017).

  12. Kim, T.K. et al. Nature 465, 182–187 (2010).

    Article  CAS  PubMed Central  Google Scholar 

  13. Andersson, R. et al. Nature 507, 455–461 (2014).

    Article  CAS  PubMed Central  Google Scholar 

  14. Li, W., Notani, D. & Rosenfeld, M.G. Nat. Rev. Genet. 17, 207–223 (2016).

    Article  CAS  Google Scholar 

  15. Werner, M.S. & Ruthenburg, A.J. Cell Rep. 12, 1089–1098 (2015).

    Article  CAS  PubMed Central  Google Scholar 

  16. Melgar, M.F., Collins, F.S. & Sethupathy, P. Genome Biol. 12, R113 (2011).

    Article  CAS  PubMed Central  Google Scholar 

  17. Werner, M.S. et al. Nat. Struct. Mol. Biol. 24, 596–603 (2017).

    Article  CAS  PubMed Central  Google Scholar 

  18. Qi, L.S. et al. Cell 152, 1173–1183 (2013).

    Article  CAS  PubMed Central  Google Scholar 

  19. Melé, M. & Rinn, J.L. Mol. Cell 62, 657–664 (2016).

    Article  PubMed Central  Google Scholar 

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Correspondence to Srimonta Gayen or Sundeep Kalantry.

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Gayen, S., Kalantry, S. Chromatin-enriched lncRNAs: a novel class of enhancer RNAs. Nat Struct Mol Biol 24, 556–557 (2017). https://doi.org/10.1038/nsmb.3430

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