Skip to main content

Thank you for visiting nature.com. You are using a browser version with limited support for CSS. To obtain the best experience, we recommend you use a more up to date browser (or turn off compatibility mode in Internet Explorer). In the meantime, to ensure continued support, we are displaying the site without styles and JavaScript.

  • Letter
  • Published:

GTP plus water mimic ATP in the active site of protein kinase CK2

Abstract

The structures of the catalytic subunit of protein kinase CK2 from Zea mays complexed with Mg2+ and with analogs of ATP or GTP were determined to 2.2 Å resolution. Unlike most other protein kinases, CK2 from various sources shows 'dual-cosubstrate specificity', that is, the ability to efficiently use either ATP or GTP as a cosubstrate. The structures of these complexes demonstrate that water molecules are critical to switch the active site of CK2 from an ATP- to a GTP-compatible state. An understanding of the structural basis of dual-cosubstrate specificity may help in the design of drugs that target CK2 or other kinases with this property.

This is a preview of subscription content, access via your institution

Access options

Buy this article

Prices may be subject to local taxes which are calculated during checkout

Figure 1: Enzyme kinetics of rmCK2α in Lineweaver-Burk representation.
Figure 2: The binding site of the nucleotide purine base in rmCK2α.
Figure 3: Global view of the rmCK2α structure in complex with AMPPNP and Mg2+.
Figure 4: Stereoview of ATP in complex with the interdomain hinge region of CAPK.

Similar content being viewed by others

References

  1. Allende, J. E. & Allende, C. C. FASEB J. 9, 313–323 (1995).

    Article  CAS  Google Scholar 

  2. Pinna, L. A., & Meggio, F. Progr. Cell Cycle Res. 3, 77–97 (1997).

    Article  CAS  Google Scholar 

  3. Guerra, B. & Issinger, O.-G. Electrophoresis 20, 391–408 (1999).

    Article  CAS  Google Scholar 

  4. Seldin, D. C. & Leder, P. Science 267, 894–897 (1995).

    Article  CAS  Google Scholar 

  5. Lindberg, R. A., Quinn, A. M., & Hunter, T. Trends Biochem. Sci. 17, 114– 119 (1992).

    Article  CAS  Google Scholar 

  6. Wilson, L. K., Dhillon, N., Thorner, J. & Martin, G. S. J. Biol. Chem. 272, 12961–12967 ( 1997).

    Article  CAS  Google Scholar 

  7. Grankowski, N., Boldyreff, B. & Issinger, O.-G. Eur. J. Biochem. 198, 25– 30 (1991).

    Article  CAS  Google Scholar 

  8. Dobrowolska, G., Boldyreff, B. & Issinger, O.-G. Biochim. Biophys. Acta 1129, 139–140 (1991).

    Article  CAS  Google Scholar 

  9. Tuazon, P.T. & Traugh, J.A. in Advances in Second Messenger and Phosphoprotein Research (eds. Greengard, P. & Robison, G.A.) 123–164 (Raven Press, New York, 1991 ).

    Google Scholar 

  10. Gatica, M., Hinrichs, M. V., Jedlicki, A., Allende, C. C., Allende, J. E. FEBS Lett. 315, 173–177 (1993).

    Article  CAS  Google Scholar 

  11. Jakobi, R. & Traugh, J. A. Eur. J. Biochem. 230 , 1111–1117 (1995).

    Article  CAS  Google Scholar 

  12. Srinivasan, N. et al. Protein Eng. 12, 119– 127 (1999).

    Article  CAS  Google Scholar 

  13. Niefind, K., Guerra, B., Pinna, L. A., Issinger, O.-G. & Schomburg, D. EMBO J. 17, 2451– 2462 (1998).

    Article  CAS  Google Scholar 

  14. Knighton, D. R. et al. Science 253, 407– 414 (1991).

    Article  CAS  Google Scholar 

  15. Sussman, J.L. et al. Acta Crystallogr. D54, 1078– 1084 (1998).

    CAS  Google Scholar 

  16. Scheffzek, K., Kliche, W., Wiesmüller, L. & Reinstein, J. Biochemistry 35, 9716–9727 (1996).

    Article  CAS  Google Scholar 

  17. Shugar, D. Acta Biochim. Pol. 43, 9–24 (1996).

    CAS  PubMed  Google Scholar 

  18. Gschwendt, M., Kittstein, W., Kielbassa, K. & Marks, F. Biochem. Biophys. Res. Commun. 206, 614– 620 (1995).

    Article  CAS  Google Scholar 

  19. Schinkmann, K. & Blenis, J. J. Biol. Chem. 272, 28695–28703 ( 1997).

    Article  CAS  Google Scholar 

  20. Carpenter, G., King, L. Jr. & Cohen, S. J. Biol. Chem. 254, 4884–4891 (1979).

    CAS  PubMed  Google Scholar 

  21. Münstermann, U. et al. Eur. J. Biochem. 189, 251– 257 (1990).

    Article  Google Scholar 

  22. Daya-Makin, M. et al. Cancer Res. 54, 2262– 2269 (1994).

    CAS  PubMed  Google Scholar 

  23. Traut, T.W. Mol. Cell. Biochem. 140, 1–22 (1994).

    Article  CAS  Google Scholar 

  24. Yuan, C.-J., Huang, C.-Y. F. & Graves, D. J. J. Biol. Chem. 268, 17683– 17686 (1993).

    CAS  PubMed  Google Scholar 

  25. Schweins, T., Scheffzek, K., Aβheuer, R. & Wittinghofer, A. J. Mol. Biol. 266, 847–856 (1997).

    Article  CAS  Google Scholar 

  26. Gray, N. S. et al. Science 281, 533–538 (1998).

    Article  CAS  Google Scholar 

  27. Guerra, B., Niefind, K., Pinna, L. A., Schomburg, D. & Issinger, O.-G. Acta Crystallogr. D54, 143–145 (1998).

    CAS  Google Scholar 

  28. Scheffzek, K., Lautwein, A., Scherer, A., Franken, S. & Wittinghofer, A. Proteins 27, 315–318 (1997).

    Article  CAS  Google Scholar 

  29. Otwinowski, Z. & Minor, W. Meth. Enzymol. 276, 307–326 (1997).

    Article  CAS  Google Scholar 

  30. Collaborative Computational Project, Number 4. Acta Crystallogr. D50, 760– 763 (1994).

  31. Jones, T. A., Zou, J. Y., Cowan, S. W. & Kjeldgaard, M. Acta Crystallogr. A47, 110–119 ( 1991).

    Article  CAS  Google Scholar 

  32. Esnouf, R.M. J. Mol. Graphics 15, 132–134 (1997).

    Article  CAS  Google Scholar 

  33. Merritt, E.A. & Bacon, D.J. Meth. Enzymol. 277, 505–524 (1997).

    Article  CAS  Google Scholar 

  34. Bradford, M.M. Anal. Biochem. 72, 248–254 (1976).

    Article  CAS  Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Karsten Niefind.

Rights and permissions

Reprints and permissions

About this article

Cite this article

Niefind, K., Pütter, M., Guerra, B. et al. GTP plus water mimic ATP in the active site of protein kinase CK2. Nat Struct Mol Biol 6, 1100–1103 (1999). https://doi.org/10.1038/70033

Download citation

  • Received:

  • Accepted:

  • Issue Date:

  • DOI: https://doi.org/10.1038/70033

This article is cited by

Search

Quick links

Nature Briefing

Sign up for the Nature Briefing newsletter — what matters in science, free to your inbox daily.

Get the most important science stories of the day, free in your inbox. Sign up for Nature Briefing