B cell acute lymphoblastic leukaemias (B-ALLs) often express CD19, which is the target of chimeric antigen receptor-engineered T cells (CART-19 cells) that can be used therapeutically through adoptive transplantation into patients with B-ALL. However, 30% of patients with B-ALL receiving CART-19 cells relapse. Sotillo et al. found that resistance to CART-19 cells occurred through epitope loss that was mediated by exon 2 mutations and alternative splicing. Exon skipping resulted in the expression of a CD19 variant in which exon 2 is no longer expressed and CART-19 cells are no longer activated.