Skip to main content

Thank you for visiting nature.com. You are using a browser version with limited support for CSS. To obtain the best experience, we recommend you use a more up to date browser (or turn off compatibility mode in Internet Explorer). In the meantime, to ensure continued support, we are displaying the site without styles and JavaScript.

  • Protocol
  • Published:

On-demand synthesis of organozinc halides under continuous flow conditions

Abstract

Organozinc reagents are versatile building blocks for introducing C(sp2)-C(sp3) and C(sp3)-C(sp3) bonds into organic structures. However, despite their ample synthetic versatility and broad functional group tolerance, the use of organozinc reagents in the laboratory is limited because of their instability, exothermicity and water sensitivity, as well as their labor-intensive preparation. Herein, we describe an on-demand synthesis of these useful reagents under continuous flow conditions, overcoming these primary limitations and supporting widespread adoption of these reagents in synthetic organic chemistry. To exemplify this procedure, a solution of ethyl zincbromoacetate is prepared by flowing ethyl bromoacetate through a column containing metallic zinc. The temperature of the column is controlled by a heating jacket and a thermocouple in close contact with it. Advice on how to perform the procedure using alternative equipment is also given to allow a wider access to the methodology. Here we describe the preparation of 50 ml of solution, which takes 1 h 40 min, although up to 250–300 ml can be prepared with the same column setup at a rate of 30 ml per h. The procedure provides the reagent as a clean solution with reproducible concentration. Organozinc solutions generated in flow can be coupled to a second flow reactor to perform a Reformatsky reaction or can be collected over a flask containing the required reagents for a batch Negishi reaction.

This is a preview of subscription content, access via your institution

Access options

Buy this article

Prices may be subject to local taxes which are calculated during checkout

Figure 1: Reaction of organozinc halides with a variety of electrophiles.
Figure 2: Range of reactions possible in which alkyl zincbromoacetates are presented using a zinc column.
Figure 3
Figure 4: Equipment for assembly and setup of zinc column reactor.
Figure 5: Materials used for zinc activation.
Figure 6
Figure 7: Preparation of the zinc column.
Figure 8
Figure 9: Setup of the reactor module.
Figure 10
Figure 11: Reaction conditions and setup for the zinc activation.
Figure 12: Setup and conditions for preparation of organozinc reagent.
Figure 13
Figure 14
Figure 15: Color change observed during the fast titration.

Similar content being viewed by others

References

  1. Roughley, S.D. & Jordan, A.M. The medicinal chemist's toolbox: an analysis of reactions used in the pursuit of drug candidates. J. Med. Chem. 54, 3451–3479 (2011).

    Article  CAS  Google Scholar 

  2. Brown, D.G. & Boström, J. Analysis of past and present synthetic methodologies on medicinal chemistry: where have all the new reactions gone? J. Med. Chem. 59, 4443–4458 (2016).

    Article  CAS  Google Scholar 

  3. Tsukamoto, T. Tough times for medicinal chemists: are we to blame? ACS Med. Chem. Lett. 4, 369–370 (2013).

    Article  CAS  Google Scholar 

  4. Walters, W.P., Green, J., Weiss, J.R. & Murcko, M.A.J. What do medicinal chemists actually make? A 50-year retrospective. J. Med. Chem. 54, 6405–4516 (2011).

    Article  CAS  Google Scholar 

  5. Hirose, T. & Kodama, K. Recent advances in organozinc reagents. in Comprehensive Organic Synthesis 2nd edn, Vol. 1 (eds. Knochel, P. & Molander, G.A.) 204–266 (Elsevier, 2014).

  6. Knochel, P. & Singer, R.D. Preparation and reactions of polyfunctional organozinc reagents in organic synthesis. Chem. Rev. 6, 2117–2188 (1993).

    Article  Google Scholar 

  7. Rieke, R.D. & Kim, S.H. Organozinc reagents prepared from highly active zinc. e-EROS Encyclopedia of Reagents for Organic Synthesis (Wiley, 2012).

  8. Zhu, L., Wehmeyer, R.M. & Rieke, R.D. The direct formation of functionalized alkyl(aryl)zinc halides by oxidative addition of highly reactive zinc with organic halides and their reactions with acid chlorides, α,β-unsaturated ketones, and allylic, aryl, and vinyl halides. J. Org. Chem. 56, 1445–1453 (1991).

    Article  CAS  Google Scholar 

  9. Zhu, L. & Rieke, R.D. A facile method for the preparation of functionalized 2,3-disubstituted-1,3-butadienes. Tetrahedron Lett. 32, 2865–2866 (1991).

    Article  CAS  Google Scholar 

  10. Zhu, L., Shaughnessy, K.H. & Rieke, R.D. A facile method for the preparation of functionalized 2-halo-1-olefins. Synth. Commun. 23, 525–529 (1993).

    Article  CAS  Google Scholar 

  11. Huck, L., Berton, M., de la Hoz, A., Díaz-Ortiz, A. & Alcázar, J. Reformatsky and Blaise reactions in flow as a tool for drug discovery. One pot diversity oriented synthesis of valuable intermediates and heterocycles. Green Chem. 19, 1420–1424 (2017).

    Article  CAS  Google Scholar 

  12. Dilman, A.D. & Levin, V.V. Advances in the chemistry of organozinc reagents. Tetrahedron Lett. 57, 3986–3992 (2016).

    Article  CAS  Google Scholar 

  13. Rieke, R.D., Hudnall, P.M. & Uhm, S.J. Activated metals. Preparation of highly reactive zinc. J. Chem. Soc. Chem. Commun. 269–270 (1973).

  14. Soorukram, D., Boudet, N., Malakov, V. & Knochel, P. Preparation of polyfunctionalized 2,6-dimethoxypyrimidine derivatives via chemo- and regioselective direct zinc insertion. Synthesis 3915–3922 (2007).

  15. Malet-Sanz, L. & Flavien, S. Continuous flow synthesis. A pharma perspective. J. Med. Chem. 55, 4062–4098 (2012).

    Article  CAS  Google Scholar 

  16. Wegner, J., Ceylan, S. & Kirschning, A. Ten key issues in modern flow chemistry. Chem. Commun. 47, 4583–4592 (2011).

    Article  CAS  Google Scholar 

  17. Noel, T., Kuhn, S., Musacchio, A.J., Jensen, K.F. & Buchwald, S.L. Suzuki-Miyaura cross-coupling reactions in flow: multistep synthesis enabled by a microfluidic extraction. Angew. Chem. Int. Ed. Engl. 50, 5943–5946 (2011).

    Article  CAS  Google Scholar 

  18. Newman, S.G. & Jensen, K.F. The role of flow in green chemistry and engineering. Green Chem. 15, 1456–1472 (2013).

    Article  CAS  Google Scholar 

  19. Alonso, N., Miller, L.Z., Muñoz, J.d.M., Alcázar, J. & McQuade, D.T. Continuous synthesis of organozinc halides coupled to Negishi reactions. Adv. Synth. Catal. 356, 3737–3741 (2014).

    Article  CAS  Google Scholar 

  20. Yang, H. et al. Reaction of organozinc halides with aryl isocyanates. Tetrahedron 69, 2588–2593 (2013).

    Article  CAS  Google Scholar 

  21. Knochel, P., Yeh, M.C.P., Berk, S.C. & Talbert, J. Synthesis and reactivity toward acyl chlorides and enones of the new highly functionalized copper reagents RCu(CN) ZnI. J. Org. Chem. 53, 2390–2392 (1988).

    Article  CAS  Google Scholar 

  22. Mineno, M., Sawai, Y., Kanno, K., Sawada, N. & Mizufune, H. a rapid and diverse construction of 6-substituted-5,6-dihydro-4-hydroxy-2-pyrones through double Reformatsky reaction. Tetrahedron 69, 10921–10926 (2013).

    Article  CAS  Google Scholar 

  23. Mineno, M., Sawai, Y., Kanno, K., Sawada, N. & Mizufune, H. Double Reformatsky reaction: divergent synthesis of δ-hydroxy-β-ketoesters. J. Org. Chem. 78, 5843–5850 (2013).

    Article  CAS  Google Scholar 

  24. Greszler, S.N., Malinowski, J.T. & Johnson, J.S. Formal synthesis of leustroducsin B via Refortmasky/Claisen condensation of silyl glyoxylates. Org. Lett. 13, 3206–3209 (2011).

    Article  CAS  Google Scholar 

  25. Greszler, S.N., Malinowski, J.T. & Johnson, J.S. Remote stereoinduction in the acylation of fully substituted enolates: tandem Reformatsky/quaternary Claysen condensations of silyl glyoxylates and β-lactones. J. Am. Chem. Soc. 132, 17393–17395 (2010).

    Article  CAS  Google Scholar 

  26. Greszler, S.N. & Johnson, J.S. Diasteroselective synthesis of pentasubstituted γ-butyrolactones from silyl glyoxylates and ketones through a double Reformatsky reaction. Angew. Chem. Int. Ed. Engl. 48, 3689–3691 (2009).

    Article  CAS  Google Scholar 

  27. Wong, B. et al. A chemoselective Reformatsky-Negishi approach to α-haloaryl esters. Tetrahedron 70, 1508–1515 (2014).

    Article  CAS  Google Scholar 

  28. McCann, L.C. & Organ, M.G. On The remarkably different role of salt in the cross-coupling of arylzincs from that seen with alkylzincs. Angew. Chem. Int. Ed. Engl. 53, 4386–4389 (2014).

    Article  CAS  Google Scholar 

  29. Feng, C., Cunningham, W.C., Easter, Q.T. & Blum, S.A. Role of LiCl in generating soluble organozinc reagent. J. Am. Chem. Soc. 138, 11156–11159 (2016).

    Article  CAS  Google Scholar 

Download references

Acknowledgements

We thank D.T. McQuade, Z. Miller, J. de Mata Muñoz, N. Alonso, A. de la Hoz and Á. Díaz Ortiz for their input in the progress of developing this methodology. We also thank O. Kappe for his advice.

Author information

Authors and Affiliations

Authors

Contributions

M.B. and L.H. carried out the experiments. All authors designed the protocol and J.A. supervised the project. All authors contributed to the writing of the manuscript.

Corresponding author

Correspondence to Jesús Alcázar.

Ethics declarations

Competing interests

The authors declare no competing financial interests.

Supplementary information

Supplementary Methods

Preparation of ethyl 3-hydroxy-3-(3-ethoxyphenyl)butanoate and ethyl 2-(4-bromophenyl)acetate. (PDF 354 kb)

Rights and permissions

Reprints and permissions

About this article

Check for updates. Verify currency and authenticity via CrossMark

Cite this article

Berton, M., Huck, L. & Alcázar, J. On-demand synthesis of organozinc halides under continuous flow conditions. Nat Protoc 13, 324–334 (2018). https://doi.org/10.1038/nprot.2017.141

Download citation

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1038/nprot.2017.141

This article is cited by

Comments

By submitting a comment you agree to abide by our Terms and Community Guidelines. If you find something abusive or that does not comply with our terms or guidelines please flag it as inappropriate.

Search

Quick links

Nature Briefing

Sign up for the Nature Briefing newsletter — what matters in science, free to your inbox daily.

Get the most important science stories of the day, free in your inbox. Sign up for Nature Briefing