A software tool based on gene model profiling improves analysis of alternative splice events in RNA sequencing (RNA-seq) data.
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Griffith, M. et al. Nat. Methods 7, 843–847 (2010).
Carninci, P. et al. Science 309, 1559–1563 (2005).
Cloonan, N. et al. Nat. Methods 5, 613–619 (2008).
Mortazavi, A., Williams, B.A., McCue, K., Schaeffer, L. & Wold, B. Nat. Methods 5, 621–628 (2008).
Birol, I. et al. Bioinformatics 25, 2872–2877 (2009).
Zerbino, D.R. & Birney, E. Genome Res. 18, 821–829 (2008).
Guttman, M. et al. Nat. Biotechnol. 28, 503–510 (2010).
Trapnell, C. et al. Nat. Biotechnol. 28, 511–515 (2010).
Reimers, M. & Carey, V.J. Methods Enzymol. 411, 119–134 (2006).
The authors declare no competing financial interests.
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Cloonan, N., Grimmond, S. Simplifying complexity. Nat Methods 7, 793–795 (2010). https://doi.org/10.1038/nmeth1010-793
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