Supplementary Figure 14: Comparison of gene rankings between trendsceek and gene variability. | Nature Methods

Supplementary Figure 14: Comparison of gene rankings between trendsceek and gene variability.

From: Identification of spatial expression trends in single-cell gene expression data

Supplementary Figure 14

The ranking of genes identified by trendsceek (mark-correlation ranks) was compared to spatially unaware gene variability rankings (Methods) for spatial transcriptomics mouse olfactory bulb, tissue section “replicate 3” (n=35 genes) (A), tissue section “replicate 12” (n=45 genes) (B), spatial transcriptomics breast cancer layer 2 (n=15 genes) (C) and mouse gastrulation single-cell RNA-seq data (n=107 genes) (D). Horizontal lines indicate the top 50 ranked variable genes.

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