Supplementary Figure 4 : Gene expression in CBMC clusters.

From: Simultaneous epitope and transcriptome measurement in single cells

Supplementary Figure 4

(a) Gene expression heatmap of most differentially expressed marker genes defining clusters. Dimensionality reduction followed by modularity optimization was used to cluster 8,005 CBMCs (methods). Cluster color assignments are identical to Figure 3a. The mouse control cell population was excluded from the clustering. (b) Expression of individual marker genes in the context of tSNE representation of cell relationships based on single-cell gene-expression profiles. Levels of transcripts corresponding to specific marker genes are indicated by blue shading.