Supplementary Figure 7 : Correlations between mRNA and protein marker levels in CITE-seq.

From: Simultaneous epitope and transcriptome measurement in single cells

Supplementary Figure 7

(a) Correlation between normalized mRNA expression and CLR-transformed ADT counts at a single cell level. For each gene, cells with no detected mRNA molecules were excluded. Pearson’s correlation coefficient is shown in the boxed labels. (b) Correlation between normalized mRNA expression and CLR-transformed ADT counts at the cluster level. No cells were excluded. mRNA and ADT signals were averaged per cluster before calculating Pearson’s correlation coefficient, shown in boxed labels.