Abstract
Synthetic biology seeks to probe fundamental aspects of biological form and function by construction (resynthesis) rather than deconstruction (analysis). Here we discuss how such an approach could be applied to assemble synthetic quasibiological systems able to replicate and evolve, illuminating universal properties of life and the search for its origins.
This is a preview of subscription content, access via your institution
Relevant articles
Open Access articles citing this article.
-
Self-replication of DNA by its encoded proteins in liposome-based synthetic cells
Nature Communications Open Access 20 April 2018
Access options
Subscribe to this journal
Receive 12 print issues and online access
$259.00 per year
only $21.58 per issue
Buy this article
- Purchase on SpringerLink
- Instant access to full article PDF
Prices may be subject to local taxes which are calculated during checkout
References
Woese, C. Proc. Natl. Acad. Sci. USA 95, 6854–6859 (1998).
Davies, P.C. Philos. Trans. A Math. Phys. Eng. Sci. 369, 624–632 (2011).
Paddon, C.J. et al. Nature 496, 528–532 (2013).
Leisner, M., Bleris, L., Lohmueller, J., Xie, Z. & Benenson, Y. Nat. Nanotechnol. 5, 666–670 (2010).
Gibson, D.G. et al. Science 329, 52–56 (2010).
Greiss, S. & Chin, J.W. J. Am. Chem. Soc. 133, 14196–14199 (2011).
Prescher, J.A., Dube, D.H. & Bertozzi, C.R. Nature 430, 873–877 (2004).
Marlière, P. et al. Angew. Chem. Int. Ed. Engl. 50, 7109–7114 (2011).
Neumann, H., Wang, K., Davis, L., Garcia-Alai, M. & Chin, J.W. Nature 464, 441–444 (2010).
Lajoie, M.J. et al. Science 342, 357–360 (2013).
Hirao, I., Kimoto, M. & Yamashige, R. Acc. Chem. Res. 45, 2055–2065 (2012).
Rackham, O. & Chin, J.W. Nat. Chem. Biol. 1, 159–166 (2005).
Noireaux, V., Maeda, Y.T. & Libchaber, A. Proc. Natl. Acad. Sci. USA 108, 3473–3480 (2011).
Kurihara, K. et al. Nat. Chem. 3, 775–781 (2011).
Nourian, Z., Roelofsen, W. & Danelon, C. Angew. Chem. Int. Ed. Engl. 51, 3114–3118 (2012).
Stano, P., D'Aguanno, E., Bolz, J., Fahr, A. & Luisi, P.L. Angew. Chem. Int. Ed. Engl. 52, 13397–13400 (2013).
Forster, A.C. & Church, G.M. Mol. Syst. Biol. 2, 45 (2006).
Benner, S.A., Ricardo, A. & Carrigan, M.A. Curr. Opin. Chem. Biol. 8, 672–689 (2004).
Budin, I. & Szostak, J.W. Annu. Rev. Biophys. 39, 245–263 (2010).
Szostak, J.W., Bartel, D.P. & Luisi, P.L. Nature 409, 387–390 (2001).
Mercier, R., Kawai, Y. & Errington, J. Cell 152, 997–1007 (2013).
Lincoln, T.A. & Joyce, G.F. Science 323, 1229–1232 (2009). The first demonstration of autonomous and exponential RNA self-copying.
Vaidya, N. et al. Nature 491, 72–77 (2012).
Johnston, W.K., Unrau, P.J., Lawrence, M.S., Glasner, M.E. & Bartel, D.P. Science 292, 1319–1325 (2001). The first demonstration of a general RNA-catalyzed templated replication activity.
Wochner, A., Attwater, J., Coulson, A. & Holliger, P. Science 332, 209–212 (2011).
Attwater, J., Wochner, A. & Holliger, P. Nat. Chem. 5, 1011–1018 (2013). An RNA polymerase ribozyme that can synthesize RNAs longer than itself.
Ninio, J. & Orgel, L.E. J. Mol. Evol. 12, 91–99 (1978).
Zhang, S., Blain, J.C., Zielinska, D., Gryaznov, S.M. & Szostak, J.W. Proc. Natl. Acad. Sci. USA 110, 17732–17737 (2013).
Deck, C., Jauker, M. & Richert, C. Nat. Chem. 3, 603–608 (2011).
Adamala, K. & Szostak, J.W. Science 342, 1098–1100 (2013). Templated RNA synthesis within a protocell facilitated by citrate.
Szostak, J.W. J. Syst. Chem. 3, 2 (2012).
Zhu, T.F. & Szostak, J.W. J. Am. Chem. Soc. 131, 5705–5713 (2009).
Szostak, J.W. Philos. Trans. R. Soc. Lond. B Biol. Sci. 366, 2894–2901 (2011).
Bowler, F.R. et al. Nat. Chem. 5, 383–389 (2013).
Engelhart, A.E., Powner, M.W. & Szostak, J.W. Nat. Chem. 5, 390–394 (2013).
Powner, M.W., Gerland, B. & Sutherland, J.D. Nature 459, 239–242 (2009). A prebiotic synthesis of the pyrimidine ribonucleotides, providing key building blocks for the RNA world.
Mansy, S.S. & Szostak, J.W. Proc. Natl. Acad. Sci. USA 105, 13351–13355 (2008).
Moretti, J.E. & Müller, U.F. Nucleic Acids Res. 10.1093/nar/gkt1405 (21 January 2014).
Ichihashi, N. et al. Nat. Commun. 4, 2494 (2013).
Baaske, P. et al. Proc. Natl. Acad. Sci. USA 104, 9346–9351 (2007).
Attwater, J., Wochner, A., Pinheiro, V.B., Coulson, A. & Holliger, P. Nat. Commun. 1, 76 (2010).
Koga, S., Williams, D.S., Perriman, A.W. & Mann, S. Nat. Chem. 3, 720–724 (2011).
Kim, G.H., Klotchkova, T.A. & Kang, Y.M. J. Cell Sci. 114, 2009–2014 (2001).
Rasmussen, S. et al. Science 303, 963–965 (2004).
Cooper, G.J. et al. Angew. Chem. Int. Ed. Engl. 50, 10373–10376 (2011).
Pinheiro, V.B. et al. Science 336, 341–344 (2012).
Szathmáry, E. Nat. Rev. Genet. 4, 995–1001 (2003).
Attwater, J. et al. Chem. Sci. 4, 2804–2814 (2013).
Ameta, S., Winz, M.L., Previti, C. & Jäschke, A. Nucleic Acids Res. 42, 1303–1310 (2014).
Jiménez, J.I., Xulvi-Brunet, R., Campbell, G.W., Turk-MacLeod, R. & Chen, I.A. Proc. Natl. Acad. Sci. USA 110, 14984–14989 (2013).
Acknowledgements
This work was supported by a Homerton College, Cambridge, Junior Research Fellowship (J.A.) and by the Medical Research Council (programme number U105178804).
Author information
Authors and Affiliations
Corresponding author
Ethics declarations
Competing interests
The authors declare no competing financial interests.
Rights and permissions
About this article
Cite this article
Attwater, J., Holliger, P. A synthetic approach to abiogenesis. Nat Methods 11, 495–498 (2014). https://doi.org/10.1038/nmeth.2893
Published:
Issue Date:
DOI: https://doi.org/10.1038/nmeth.2893
This article is cited by
-
Self-replication of DNA by its encoded proteins in liposome-based synthetic cells
Nature Communications (2018)
-
Non-living predators
Nature Chemistry (2017)
-
Simple peptides derived from the ribosomal core potentiate RNA polymerase ribozyme function
Nature Chemistry (2017)