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MiTCR: software for T-cell receptor sequencing data analysis

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Figure 1: MiTCR data analysis.


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We are grateful to T. Schumacher and C. Linnemann for valuable technical discussions and to M. Eisenstein for English editing. This work was supported by the Molecular and Cell Biology program of the Russian Academy of Sciences and Russian Foundation for Basic Research (12-04-33139-mol-a, 12-04-33065-mol-a, 12-04-00229-a, 13-04-00998-a and 13-04-40251).

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Correspondence to Dmitriy M Chudakov.

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The authors declare no competing financial interests.

Supplementary information

Supplementary Text and Figure

Supplementary Figure 1, Supplementary Tables 1–3 and Supplementary Notes 1–6 (PDF 368 kb)

Supplementary Data 1

Sample sequencing file of TCRβ NGS dataset. (ZIP 5778 kb)

Supplementary Data 2

Sample output file in the tab-delimited format. (TXT 5240 kb)

Supplementary Data 3

Sample output file in the cls format. (ZIP 1080 kb)

Supplementary Software

Archive with MiTCR executable files. (ZIP 1908 kb)

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Bolotin, D., Shugay, M., Mamedov, I. et al. MiTCR: software for T-cell receptor sequencing data analysis. Nat Methods 10, 813–814 (2013).

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