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ChromHMM: automating chromatin-state discovery and characterization

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Figure 1: Sample outputs of ChromHMM.


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We thank members of the Massachusetts Institute of Technology Computational Biology group and B.E. Bernstein for useful discussions related to this work. The work was supported by a US National Science Foundation postdoctoral fellowship 0905968 to J.E. and grants from the US National Institutes of Health (1-RC1-HG005334 to M.K. and 1 U54 HG004570 to B.E. Bernstein).

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Correspondence to Manolis Kellis.

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Supplementary Figures 1–4, Supplementary Note, Supplementary Data (PDF 1388 kb)

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Ernst, J., Kellis, M. ChromHMM: automating chromatin-state discovery and characterization. Nat Methods 9, 215–216 (2012).

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