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Autoimmune-associated lymphoid tyrosine phosphatase is a gain-of-function variant

Abstract

A SNP in the gene PTPN22 is associated with type 1 diabetes, rheumatoid arthritis, lupus, Graves thyroiditis, Addison disease and other autoimmune disorders. T cells from carriers of the predisposing allele produce less interleukin-2 upon TCR stimulation, and the encoded phosphatase has higher catalytic activity and is a more potent negative regulator of T lymphocyte activation. We conclude that the autoimmune-predisposing allele is a gain-of-function mutant.

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Figure 1: The disease-associated variant LYP-Trp620 inhibits T cell activation more potently than LYP-Arg620.
Figure 2: The disease-associated variant LYP-Trp620 is a more potent inhibitor of early TCR signaling and a more active PTP.

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Acknowledgements

We thank A. Cao for suggestions and P. Frongia, P. Pusceddu, M. Chessa and R. Riccardi for recruiting affected individuals and collecting blood samples. This work was supported by a fellowship from the Norwegian Cancer Society (to T.V.) and by grants from the Juvenile Diabetes Research Foundation (to N.B.), Telethon-JDRF (to F.C.) and the US National Institutes of Health (to T.M).

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Correspondence to Nunzio Bottini.

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Supplementary information

Supplementary Fig. 1

Analysis of T cell lineages and subpopulations in T1D children of RW or RR genotype. (PDF 151 kb)

Supplementary Fig. 2

The disease-associated LYP*W620 is a more potent inhibitor of early TCR signaling. (PDF 111 kb)

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Vang, T., Congia, M., Macis, M. et al. Autoimmune-associated lymphoid tyrosine phosphatase is a gain-of-function variant. Nat Genet 37, 1317–1319 (2005). https://doi.org/10.1038/ng1673

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