Table 1 Outcomes of the gene expression–based prediction methods

From: Application of comparative functional genomics to identify best-fit mouse models to study human cancer

  CCP 1NN 3NN NC SVM LDA
Predicted subclass A B A B A B A B A B A B
Human HCC
Subclass A (n = 41) 41 0 40 1 39 2 41 0 41 0 41 0
Subclass B (n = 50) 2 48 2 48 2 48 2 48 2 48 2 48
Percentage correctly classified a 98 97 96 98 98 98
Mouse HCC
DENA (n = 3) 1 2 1 2 1 2 1 2 1 2 1 2
Myc (n = 8) 0 8 0 8 0 8 0 8 0 8 0 8
E2f1 (n = 10) 1 9 1 9 1 9 1 9 1 9 1 9
Myc E2f1 (n = 9) 3 6 2 7 3 6 3 6 2 7 3 6
Myc Tgfa (n = 9) 7 2 7 2 7 2 7 2 7 2 7 2
P2) b 0.0048 0.0031 0.0048 0.0048 0.0031 0.0048
P2) without Myc Tgfac 0.053 0.11 0.053 0.053 0.11 0.053