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Comparison of a proteomic approach with a microarray-based approach to detect exons in the mouse genome

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Figure 1: Comparison of mass-identified peptides to exons derived from mouse genomic exon microarrays.
Figure 2: Comparison of exon-peptide matches with mouse liver exon abundances detected by the exon microarrays.

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Acknowledgements

We are grateful to D. Li for critical revision of the manuscript. This work was supported by grants from the Chinese National Natural Science Foundation to J.-R.W. and R.Z. (30230110, 0637S12442 and 30425021).

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Supplementary information

Supplementary Table 1

Matches of mass-identified peptides and exons that passed primary filters. (PDF 1351 kb)

Supplementary Table 2

Matches of mass-identified peptides and exons that passed stringent filters. (PDF 963 kb)

Supplementary Table 3

RefSeq genes corresponding to the group of 28 exons with the highest abundance and matched peptides. (PDF 20 kb)

Supplementary Methods (PDF 70 kb)

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Sheng, QH., Wang, LS., Dai, J. et al. Comparison of a proteomic approach with a microarray-based approach to detect exons in the mouse genome. Nat Genet 38, 1223–1224 (2006). https://doi.org/10.1038/ng1106-1223

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