The growing list of known microRNAs is only as useful as our ability to identify the mRNA targets they control. A new study stresses the role of messenger RNA structure in microRNA target recognition and suggests that binding of the RNA-induced silencing complex is largely controlled by the thermodynamics of RNA-RNA interactions.
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References
Griffiths-Jones, S. Nucl. Acids Res. 32, D109–D111 (2004).
Berezikov, E. et al. Genome Res. 16, 1289–1298 (2006).
Sethupathy, P., Corda, B. & Hatziegeorgiou, A.G. RNA 12, 192–197 (2006).
Grün, D., Wang, Y.L., Langenberger, D., Gunsalus, K.C. & Rajewsky, N. PLoS Comput. Biol. 1, e13 (2005).
Lewis, B.P., Burge, C.B. & Bartel, D.P. Cell 120, 15–20 (2005).
Bentwich, I. et al. Nat. Genet. 37, 766–770 (2005).
Kertesz, M., Iovino, N., Unnerstall, U., Gaul, U. & Segal, E. Nat. Genet. 39, 1278–1284 (2007).
Rehmsmeier, M., Steffen, P., Höchsmann, M. & Giegerich, R. RNA 10, 1507–1517 (2004).
Mückstein, U. et al. Bioinformatics 22, 1177–1182 (2006).
Ding, Y. & Lawrence, C.E. Nucl. Acids Res. 29, 1034–1046 (2001).
Long, D. et al. Nat. Struct. Mol. Biol. 14, 287–294 (2007).
Robins, H., Li, Y. & Padgett, R.W. Proc. Natl. Acad. Sci. USA 102, 4006–4009 (2005).
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Hofacker, I. How microRNAs choose their targets. Nat Genet 39, 1191–1192 (2007). https://doi.org/10.1038/ng1007-1191
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DOI: https://doi.org/10.1038/ng1007-1191
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