Localization of Two Recognition Sites in Yeast Valine tRNA I

Abstract

AS a part of our research on the structure–function relationships of tRNA^val_I we have been mapping the regions that take part in the recognition of valyl tRNA ligase. Using the “dissected molecule” method¹, we have shown that associated molecules consisting of tRNA^Val_I fragments lacking nucleotides in the anticodon loop, the dihydrouridine loop (D) or the thymidine loop (T) retain their acceptor activity. By contrast, dissected molecules devoid of the pentanucleotide A₃₆CACGp (the sequence A₃₆C belongs to the anticodon T₃₅AC) or lacking any quarter (F_1–19, F_17–35 or F_36–57) are inactive^2–4. Here we report a study of the acceptor activity of other incomplete tRNA^val_I molecules. The principal inference is that the dinucleotides A₃₆Cp in the anticodon loop and 5′-terminal pG₁Gp in the CCA stem are at least parts of two different recognition sites of this tRNA.