When a liquid is supercooled towards the glass transition, its dynamics drastically slows down, whereas its static structure remains relatively unchanged. Finding a structural signature of the dynamic slowing down is a major challenge, yet it is often too subtle to be uncovered. Here we discover the structural signatures for both translational and rotational dynamics in monolayers of colloidal ellipsoids by video microscopy experiments and computer simulations. The correlation lengths of the dynamic slowest-moving clusters, the static glassy clusters, the static local structural entropy and the dynamic heterogeneity follow the same power-law divergence, suggesting that the kinetic slowing down is caused by a decrease in the structural entropy and an increase in the size of the glassy cluster. Ellipsoids with different aspect ratios exhibit single- or double-step glass transitions with distinct dynamic heterogeneities. These findings demonstrate that the particle shape anisotropy has important effects on the structure and dynamics of the glass.
The nature of the glass transition is one of the major unsolved mysteries in physics1,2,3. On approaching the glass transition, the dynamics becomes not only progressively slower but also more spatially heterogeneous1,2. Whether such dynamic heterogeneity (DH) is associated with any structural change is a central problem and an important theoretical assumption in glass transition studies2,4,5,6,7,8. Two types of structure signatures, amorphous order2,4,6,9 and crystalline order8, have been proposed as responsible for the dynamics arrest. As an archetypal model of amorphous order, icosahedral order was often considered to be crucial for vitrification in systems of spheres9,10,11, and its percolation was associated with the glass transition12. On the other hand, the ground-state crystalline structure, even if avoided, is suggested to be important for the glass transition8. Recently, crystalline clusters with low structural entropy were shown to be responsible for the dynamic arrest in systems of spheres13,14,15. Despite the intensive search for the structural origin of slow dynamics in glass transitions, little is known for systems of anisotropic particles. Here we employ colloidal ellipsoids that rarely exhibit local crystalline order or icosahedral order studied in systems of spheres. By identifying the static glassy particles and determining the local structural entropies for anisotropic particles, we discover novel structural signatures of DHs in both experiments and simulations, and confirmed that the glassy clusters with low structural entropy are responsible for dynamic arrest not only in translational degrees of freedom13,14,15, but also in rotational degrees of freedom.
Colloids are considered as outstanding model systems for glass transition studies because trajectories of individual particles can be directly measured by video microscopy16,17,18. Significant insights into the glass transition have been obtained from experiments on colloidal spheres17,18,19,20. Anisotropic particles, by contrast, are much less frequently used as a model system in such studies21,22,23,24, despite the fact that they can better mimic molecules with anisotropic shapes or interactions. Monodisperse ellipsoids are excellent glass formers in two dimensions (2D) because their shape can effectively frustrate crystallization and quasi-long-range nematic order22,25.
Here we study the glass transitions in monolayers of colloidal ellipsoids. The quasi-2D sample enables us to better image and track particle motion. The anisotropic shape of the particles makes both translational and rotational motion measurable. We used four batches of polymethyl methacrylate (PMMA) ellipsoids with aspect ratios P=a/b=2.3, 3.5, 6.0 and 9.0, where a and b are the semi-major and semi-minor axes, respectively. All the ellipsoids were obtained by stretching spheres with a diameter of 2.0 μm. A monolayer of ellipsoids was dispersed in water between two parallel horizontal glass walls. For colloids in 2D, the area fraction ϕ≡πabρ plays a similar role as the inverse temperature 1/T in molecular systems16,17. Here ρ is the number density. About 10 area fractions within 0.20≤ϕ≤0.86 were studied for each aspect ratio by video microscopy. During the 3- to 6-h measurements at each ϕ, no drift flow or density change was observed. The Brownian motion of ~6,000 ellipsoids in the field of view was typically recorded at one frame per second. The center-of-mass positions and orientations of individual ellipsoids were tracked using our image-processing algorithm26.
In this paper, we focus on the development of DH, the evolution of static structures and their relationships towards the glass transition at different aspect ratios. First, we characterize the kinetic phase behaviour at different aspect ratios by measuring the mode-coupling critical point ϕc and the ideal glass transition point ϕ0 from the fits to the structural relaxation times as a function of density3,22,27. Next, we measure the DHs by directly visualizing the spatial distribution of fast translational (FT), fast rotational (FR), slow translational (ST) and slow rotational (SR) particles and by measuring the four-point dynamic correlations2,28. Finally, we analyse the static structures by identifying glassy particles and measuring local structural entropy. From these analyses in both translational and rotational degrees of freedom, we find the following structural signatures of the dynamic slowing down in monolayers of ellipsoids: the static glassy (that is, high number of neighbours for translational motion and high nematic order for orientational motion) clusters correspond to low structural entropy and are highly correlated to clusters with the slowest dynamics, thereby suggesting that the kinetic slowing down is caused by a decrease in the structural entropy and a increase in the size of the glassy clusters. This indicates that it is the growth of glassy clusters with low structural entropy that dictates the dynamic arrest rather than the local crystalline order or particular amorphous order, which rarely exists in systems of ellipsoids.
The equilibrium and non-equilibrium phase behaviour of ellipsoids in 2D can be qualitatively described as follows (Fig. 1). When the aspect ratio P=1, monodisperse disks only form crystals or polycrystals even under the fastest quench to high density in experiment and simulation. For P≃1, ellipsoids resemble circular disks and form 2D crystals with free rotational motion owing to the spacing between them (Fig. 1b). This rotator phase or plastic crystal in 2D has quasi-long-range translational order and short-range nematic orientational order. As P→∞, ellipsoids would form a nematic phase (Fig. 1e) with quasi-long-range orientational order and short-range translational order29. Ellipsoids with intermediate P tend to form local splay structures at high density (Fig. 1f), so that the system has neither quasi-long-range translational order nor quasi-long-range orientational order, that is, a glass. Moreover, glasses with pseudonematic domains may form at large P (Fig. 1d), and glasses without domains may form at small P (Fig. 1c). The molecular mode-coupling theory30 predicts similar glasses for ellipsoids in three dimensions, including an orientational glass at P≳2.5 where rotational motion becomes glassy while the translational motion remains quasi-ergodic31. Simulations about glass of ellipsoids mainly focused on small aspect ratios in 2D25,32,33. The recent simulation about ellipses in 2D indicates that the rotational glass transition should be at a lower density than the translational one for P>3, while at a higher density for P<2 (ref. 34). The orientational glass has been observed experimentally in quasi-2D systems of colloidal ellipsoids with P=6 (ref. 22). Here we found that the 2D orientational glass region shrinks as P decreases and completely vanishes at P≃2.5.
We quantitatively measure the glass transition densities from the translational and rotational relaxations characterized by the self-intermediate scattering function and the orientational correlation function , respectively25. xj(t) and θj(t) are the position and orientation of ellipsoid j at time t, q is the scattering vector, n is a positive integer, N is the total number of particles and ‹ › denotes the ensemble average. We chose q=qm corresponding to the first peak in the structure factor at high density and n=3 in Fig. 2. Different choices of q and n yield the same glass transition points (Fig. 3c,f). At high ϕ, both Fs(t) and Ln(t) develop a two-step relaxation, a signature of glassy dynamics. According to the mode-coupling theory, the long-time α-relaxation follows the Kohlrausch law e−(t/τ)β (ref. 27) and the structural relaxation time τ follows
where ϕc is the critical glass transition point, and γ is obtained from fitting the α- and β-relaxations27. Translational τT and rotational τθ obtained from Fig. 2a,b can both be well fitted with equation (1); (Fig. 2c). The fitted for P=2.3 indicates a single-step glass transition (supercooled liquid→glass), while for P=3.5, 6.0 and 9.0 (Figs 2c and 3c,f) corresponds to a double-step glass transition (supercooled liquid→orientational glass→glass). This agrees with the observation that ellipsoids form pseudonematic domains only at P≳2.5 such that they no longer rotate but still glide translationally within the domains, a signature of an orientational glass22,31.
Figure 2d shows that the relaxation time is also satisfactorily fitted with the Vogel–Fulcher–Tammann equation
where ϕ0 is the ideal glass transition point and B is the fragility index3,4. Both the fitted ϕ0 and ϕc shown in Fig. 2e confirm the single-step glass transition at P≲2.5 and the double-step glass transition at P≳2.5. ϕ0>ϕc because all structural relaxations cease at ϕ0, while only free-diffusion relaxations become kinetically arrested at ϕc (refs 1, 3). A smaller B represents a more fragile liquid whose viscosity or τ is more sensitive to a change in T or ϕ. Fragility is the key concept in the search for a universal description of dynamic arrest in glass-forming liquids, but its physical origin is still lacking. Recent experiments by Mattsson et al.19 have shown that softer colloidal spheres lead to a stronger (less fragile) glass. Here we observed that a larger aspect ratio similarly gives a less-fragile glass (inset of Fig. 2d). This behaviour was observed in recent simulations on rods35, but has not been tested in experiment before.
We performed kinetic Monte Carlo (kMC) simulations to mimic the Brownian motion of 5,000 ellipses. The same structural relaxations, glass transitions and fragility behaviours were reproduced as shown in Fig. 4. Figure 4e shows the crossover from the single-step glass transition to the double-step glass transition at P≃1.7, which is lower than the experimental value 2.5. We attribute this to the following two reasons: (1) an ellipsoid carries a layer of water owing to the stick boundary condition, making its effective size larger and effective P smaller in experiments; (2) surface electric charges on spheres tend to redistribute towards the two ends of the resulting ellipsoids, which reduces the experimental P.
DHs arise from the emergence of domains that are rearranged in a correlated manner and at different rates1,2. It is characterized by the cooperatively rearranging regions (CRRs), which are closely related to the macroscopic properties of a glass1,36. CRRs are usually represented by particle clusters with FT motion, which have been well studied in systems of spheres18,36,37,38. But much less is known about CRRs that are represented by particle clusters with FR22, ST13,15,37 and SR14 motion. Here we directly visualized the spatial distributions of the FT, FR, ST and SR motions of anisotropic particles (Fig. 5a,b,d,e). The fastest-moving particles are defined as those with ~8% of the largest displacements during the cage-breaking time τ2 measured from the peak of the non-Gaussian parameter of displacements Δx: α2(t)=‹ Δx4› /(3‹ Δx2› 2)18,22,39. The measured long-time diffusion coefficient D(ϕ)∝τ2(ϕ)−1 holds for all densities and P’s. Hence τ2 corresponds to the diffusion time scale37. The ~8% corresponds to the non-Gaussian long tails of the displacement distribution. Different percentages of fast and slow particles yield similar results. The slowest-moving particles are defined as those with Δr2(τT)<MSD()/4 for translation motion and Δθ2(τθ)<MSD()/4 for rotation motion, where t* corresponds to the middle of the mean-square displacement (MSD) plateau. can be regarded as a measurement of cage size37,40. Fast and slow particles formed the largest clusters at the cage-breaking time τ2 (ref. 18) and the structural relaxation time τ37, respectively. Consequently the fastest-moving particles are defined as those with the largest displacements during τ2 since they dominate diffusion39, while the slowest-moving particles are defined as those with the smallest displacements during τ since they dominate the structural relaxation37. For the two samples with the highest ϕ’s, the slow particles are defined at the longest experimental time because their τ are longer than the experimental time. This leads ξS to be only slightly underestimated at the two highest ϕ’s because the longest experimental time is on the same order of magnitude as τ. Subsequently, we can identify the FT, FR, ST and SR clusters by using the criterion that two fast (or slow) particles belong to the same cluster if they are neighbours. Here we define two ellipsoids as neighbours when they overlap after expanding by 1.5 times and no other particles intersect at their closest distance22.
The FT, FR, ST and SR clusters exhibit different novel correlations at P≳2.5 and P≲2.5. In Fig. 5a,b, we labelled the fastest translational particles in green and the fastest rotational particles in red. The particles fast in both translational and rotational motion are labelled in yellow. In Fig. 5d,e, ellipsoids are similarly labelled for slowest particles. The FT, FR, ST and SR particles clearly show different positive or negative correlations in Fig. 5a,d (P=2.3) and in Fig. 5b,e (P=6.0). For P≳2.5, the four types of clusters are all anticorrelated in space and the anticorrelations become stronger as P increases due to better developed nematic domains (Fig. 5b,e). For P≲2.5, by contrast, positive correlations are observed between FT and FR clusters and between ST and SR clusters as can be appreciated from the fact that most of the clusters are now coloured yellow in Fig. 5a,d. Figure 6 is the simulation counterpart of Fig. 5. It shows the same results of the spatial distribution and correlations of the FT, FR, ST and SR particles. The slow and fast particles in Fig. 6 cover about 10% of all particles. The percentage of overlap of fast (or slow) transitional and rotational particles (that is, the ratio of yellow to (red+yellow) particles) is about 20% (>10%) at P=1.5 and 5% (<10%) at P=6.0, which indicates positive and negative correlations, respectively.
which diverges at ϕS (Figs 5f and 6f). NF,S are the numbers of particles in a fast cluster and a slow cluster, respectively. Equation (4) is consistent with the scaling argument in ref. 4. The experimental fitting exponents ν=0.72, 0.59 and 0.448 for and ν=0.75, 0.625 and 0.48 for at P=2.3, 3.5 and 6.0, respectively, and the simulation ν=0.38, 0.345 and 0.29 for and ν=0.43, 0.385 and 0.33 for at P=1.5, 2.0 and 6.0, respectively. These trends indicate that the size of CRRs grows faster in more fragile glassy systems. ξF(ϕ) can be better fitted by a slightly different form, , in a broader range of ϕ, but we fit Figs 5c and 6c with equation (4) since it follows (Teff−)−ν in MCT where ~1/ϕ for colloids. and obtained from the best fits of equations (3 and 4) are almost identical to and , respectively for all P’s (Fig. 2e), in accordance with the fact that free diffusions dominated by fast particles become kinetically arrested at the mode-coupling critical density ϕc, and structural relaxations dominated by slow particles cease at the ideal glass transition density ϕ0. Above ϕF≃ϕc, the fast particles dispersed randomly because they were all caged separately18. Moreover, we observe from the insets of Fig. 5f,i that the characteristic size of slow clusters ξS reflects the length scale of DHs, which is typically characterized by the dynamic correlation length ξ4 obtained from the four-point density correlation function2,28. The insets of Figs 5i and 6i show that ξ4∝ϕ/(ϕ0−ϕ)13 is identical to equation (4) since our ϕS≃ϕ0. Hence ξS(ϕ)∝ξ4(ϕ) for both translational and rotational motion and for all P’s.
The structure–dynamics relationship
First, we probe the static structure by identifying the glassy particles and show that the glassy clusters are highly correlated to the dynamic slow clusters in both translational and rotational degrees of freedom. Glassy particles are defined as local static structures with strong cage effects. We define a particle with Nn≥6 nearest neighbours as translational glassy, and a particle with a local orientational order as rotational glassy, where Δθj is the angle difference between the particle and its jth neighbour. In practice, the glassy particles in Figs 5g,h and 6g,h are defined from the structures averaged over τ for better statistics: for translational glassy particles and for rotational glassy particles. Such an average was used in refs 13, 14 and is reasonable since slow particles are defined over the structural relaxation time τ. Note that Nn and Sn are still static quantities after the time averaging. Without time averaging, the positive spatial correlations can also be resolved, but with a larger noise. Nn and Sn in Figs 5i and 6i are defined without time average. Rotational glassy particles have a high local nematic orientational order, but the translational glassy particles do not exhibit apparent positional order (see the three typical configurations with some splay structures in Fig. 7).
Nn and Sn exhibited broader probability distributions, that is, more structural disorder and stronger frustration, at larger P. This observation confirmed the expectation that the lower dynamic fragility (inset of Fig. 2d) arises from the stronger structural frustration5,13. The complex local structures in an ellipsoid system (Fig. 7) make it difficult to identify whether it is geometrical frustration5 or frustration due to competing order8,13,14. For geometrical frustration, the slow dynamics corresponds to the local stable structure (for example, icosahedral order) that cannot tile the whole space, while the slow dynamics corresponds to the global stable structure (for example, crystalline order) in competing-order frustration. In ellipsoids, however, a local favourable structure is ambiguous. The close packing of three ellipsoids tends to form a splay structure as shown in Fig. 1f, but close packing of more ellipsoids will form different structures (Fig. 7). Hence the observed slow clusters (Figs 5d,e and 6d,e) contain various complex structures without a particular crystalline or amorphous order.
The fraction of glassy particles increases with packing fraction ϕ up to 30% at our highest ϕ, while the fraction of slow particles remains at around 8%. These particles have strong positive correlation in space (Figs 5g,h and 6g,h). When P≳2.5, translational and rotational glassy clusters are spatially anticorrelated: translational glassy particles are mainly found at domain boundaries, while rotational glassy particles are mainly inside one or multiple adjacent nematic domains. The number of particles in a translational (or rotational) glassy cluster is denoted as (or ). The mean glassy-cluster size can be well fitted with (Figs 5i and 6i), except for the rotational glassy clusters at P=2.3 (Figs 5i and 6i), since this system lacks nematic domains (Figs 5a,d and 6a,d) and the glass transition is dictated by translational motion.
The dynamic slowing down is expected to be originated from the decrease in the number of accessible configurations3,4,8. Recently, Tanaka et al.13 measured the local structural entropy arising from the two-body correlation, s2, in translational degree of freedom in systems of hard spheres. They showed that crystalline clusters have a lower structural entropy and their sizes have the same power-law divergence as the correlation length of DH when approaching the glass transition13. Here we similarly explore whether glassy clusters are related to low structural entropy in systems of ellipsoids. s2 of an ellipsoid i comprises the translational and rotational entropies, , which can be evaluated as41,42
where kB is the Boltzmann constant, ρ is the number density, gi(r) is the radial distribution function of centers of mass relative to particle i, gi(θ|r) is the orientational distribution function of the angular difference between the long axis of particle i and its neighbouring particle at center-of-mass distance r42. The free-volume entropies from multiple layers of neighbours are included in equations (5 and 6) via the weights of gi(r) and gi(θ|r). Both the experiments (Fig. 8a–d) and the simulations (Fig. 9a–d) show that the static low-structural-entropy particles and the glassy particles are strongly correlated in both translational and rotational degrees of freedom. Note that previous studies found no correlations between DHs and the local free volume in the nearest layer43,44. By contrast, s2 contains the free-volume effect from several layers of neighbours instead of only the nearest layer, and remarkably reveals the correlations with DHs.
We measure the spatial correlation of s2, , and fit it with the 2D Ornstein–Zernike correlation function 13,45 to obtain the correlation length ξs2. ξs2 in Figs 8e and 9e are averaged over β-relaxation time τβ.τβ is fitted from the critical-decay law in the β-relaxation, where the nonergodicity parameter and the amplitude hq are constant27. Averaging over τβ was also performed when defining static crystalline structures for better statistics in ref. 46 and was shown to be short enough to avoid possible mix up of the static and the dynamic effects. Figure 8e shows that ξs2 has the same scaling as Fig. 5f,i and the inset of Fig. 5i for all P’s, hence ξs2(ϕ)∝ξg(ϕ)∝ξS(ϕ)∝ξ4(ϕ), with all the proportionality prefactors around 1 for both translational and rotational motion. Consequently the Vogel–Fulcher–Tammann equation τ(ϕ)∝exp[B?/(ϕ0−ϕ)]=exp[B ξs2/ξs20]=exp[B ξg/ξg0] indicates that the kinetic slowing down is related to the decrease in the local structural entropy and the increase in the size of the glassy clusters.
Our experiments and simulations show that the correlation lengths of the local structural entropy, glassy clusters, slow clusters and the four-point dynamic correlation length are all of the same order, ξs2(ϕ)∝ξg(ϕ)∝ξS(ϕ)∝ξ4(ϕ), with the same power-law divergence at ϕ0 in both translational and orientational degrees of freedom. This set of static-dynamic relations and strong spatial correlations of the corresponding clusters in Figs 5, 6, 8 and 9 suggest that the static glassy clusters (ξg(ϕ)) corresponding to the static low structural entropy (ξs2(ϕ)) should be the cause of the slow dynamics (ξS(ϕ)) and the increasing DHs (ξ4(ϕ)) rather than a series of coincidences. This may suggest that the glass transition has a thermodynamic origin rather than a purely dynamic origin. The power-law divergence of the static correlation length with exponent −1 suggests that the glass transition is probably a 2D Ising-type critical phenomenon8,13,15,47,48 rather than a random first-order transition scenario2, in which the dynamical correlation length grows much faster than the static correlation lengths. Moreover, the random first-order transition theory concerns positional order and not orientational order8, while the scaling of our orientational Sn is more consistent with critical behaviour.
In addition, we observed for the first time the crossover from a single-step to a double-step glass transition in a system of anisotropic particles. The glass transitions for translational and rotational motion occur at the same density when the aspect ratio P<2.5, but at different densities when P>2.5 where local nematic domains start to develop. The translational and rotational CRRs exhibit different correlations at P<2.5 and P>2.5. Moreover, ellipsoids with a larger aspect ratio lead to stronger frustration and a reduced fragility. All the experimental results are confirmed by kMC simulations of hard ellipses in 2D. These results show that the shape anisotropy of the particles has important effects on the phase behaviour and dynamics of the resulting glasses.
A monolayer of uniformly sized ellipsoids is arguably the simplest glass. Note that uniformly sized hard disks can only form crystals in 2D. This simple yet versatile glass-forming system with measurable translational and rotational dynamics at the single-particle level serves as a valuable test bed on which new insights into glass transitions in molecular systems can be derived. The observed glassy structure and the corresponding CRRs at different aspect ratios cast new light on some novel phenomena such as photomechanical effects, shape memory and excess scattering in molecular, polymeric and liquid-crystal glassy systems49,50,51,52, where local orientationally ordered domains play an important role. Our results pave the way towards a deeper understanding of the glass transition in molecular systems. We expect to find similar results in molecular glasses composed of non-spherical particles.
We fabricated ellipsoids by stretching non-cross-linked PMMA spheres (microparticles GmbH, Berlin) in air using a previously described method26,53 that is upgraded from stretching spheres in hot oil54. Briefly, PMMA spheres (0.5% by weight) were added to an aqueous solution of polyvinyl alcohol (PVA) (12% by weight) in a Petri dish. After water evaporation, the solid PVA film was taken out of the Petri dish and stretched at 130 °C, which is above the glass transition temperatures of PVA (Tg=85 °C) and PMMA (Tg=105 °C). The PMMA spheres embedded in the PVA film were thus stretched into ellipsoids. After cooling to room temperature, the PVA was dissolved and washed away with deionized water. The cleaned ellipsoid suspension was stabilized with 7 mM sodium dodecyl sulphate. The Debye layer was thin and the surface charges had minor effects. From the 2D Gaussian fitting of the images of >200 isolated ellipsoids in a dilute monolayer, we obtained the semi-major axis a and semi-minor axis b as fitting parameters. We made four batches of ellipsoids with aspect ratios P=a/b=1.76 μm/0.77 μm=2.3, P=2.33 μm/0.67 μm=3.5, P=3.33 μm/0.56 μm=6.0 and P=4.39 μm/0.49 μm=9.0. The polydispersity of the aspect ratio was 5–6% for all P’s.
A monolayer of ellipsoids was dispersed in a thin sample cell composed of two parallel glass plates. Glass surfaces of the sample cell were rigorously cleaned in a 1:4 mixture of hydrogen peroxide and sulphuric acid by sonication. Then the glass was thoroughly rinsed in deionized water. To prepare a 2D sample, a 0.5-μl droplet of the suspension was placed on a glass slide and then a coverslip was placed over it. The droplet spread into a thin film by capillary forces. The ellipsoids did not stick to the surfaces. The sample cell was sealed with epoxy glue. The area fraction was set by holding the cells up vertically for several hours to 1 day so that particles slowly drifted downwards under gravity. When the desired area fraction was reached in the ~mm2 chosen area, the cells were laid flat on the microscope stage for 2–3 h for equilibration. Two-hour and 24-h equilibration resulted in almost the same area fraction, thus the systems were in metastable equilibrium. We monitored the central ~(0.3 mm)2 area for 3–6 h at each density. The area fraction remained constant during the whole observation period. For each aspect ratio, we measured 3–5 densities in one sample cell and a total of 12 different densities in three cells. The wall separation was a constant for different densities in one cell because we chose a fixed observation area. The wall separations in different cells were almost the same since dilute ellipsoids have the same diffusion coefficients. Under the strong confinement, the heavy ellipsoids always stayed in the focal plane and the fluctuation in the z direction was very weak. The tips of ellipsoids occasionally overlapped, which shifts the glass transition points to <2% area fraction higher. For brevity, we use the term 2D instead of quasi-2D in the main text. The center-of-mass positions and the orientations of individual ellipsoids were tracked using our image-processing algorithm26. The angular resolution was 1°, and the spatial resolutions were 0.12 and 0.04 μm along the long and short axes, respectively. We projected each step of displacement measured in lab frame to the body frame, then connected all steps into a trajectory along the long and short axes53 so that transverse motion and longitudinal motion can be separately tracked.
ξ4(t). We calculated the dynamic correlation length ξ4(t) from the four-point density correlation function as follows. The four-point correlation function of the overlapping particles is defined as , where ρ is the number density. The overlapping function w|r1−r2| is unity if |r1−r2|≤0.2a for translation and |θ1−θ2|≤0.1π for rotation and zero otherwise. We calculated the four-point structure factor of overlapping particles as the Fourier transform of g4(r,t): S4(q,t)=∫g4(r,t)exp[−i q·r]d r. To extract ξ4 at t=τ, we fitted S4 with S4(q,τ)=S0/[1+(ξ4q)2]28. The fitted ξ4’s are shown in the insets of Figs 5i and 6i.
We performed kMC simulations to mimic the Brownian motion of 5,000 ellipses. In each kMC step, we randomly generated three types of trial moves: translational displacement along the long axis δa, translational displacement along the short axis δb and rotational displacement δθ. δa follows the uniform random distribution in [−Δa,Δa]. δb and δθ were similarly generated. The maximum displacements Δ satisfy
where P(δa), P(δb) and P(δθ) are the acceptance ratios for the displacements δa, δb and δθ, respectively. We employed the algorithm in ref. 55 to check the extent of overlap of two hard ellipsoids and obtained the acceptance ratios from the simulation. The ratios between the short-time diffusion coefficients Da, Db and Dθ were adopted from the experiments. We also performed simulations with different ratios and further confirmed that the short-time dynamics of individual particles does not affect the dynamics of the system close to the glass transition points. After NMC MC steps, we have and D=(Da+Db)/2, thus the duration of each MC step Δt in the unit of the Brownian time τB can be derived as
where τB is the time taken for an ellipsoid to diffuse a distance b in an infinitely dilute suspension.
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This work was supported by grants GRF601613, PRC11SC04 and NSFC11374248 (Y.H.), the ERC advanced grant 267254 (R.N.), NSFC grants 11104286, 11372314, 51071166 and NBRP grant 2011CB710901 (Y.W. and Z.Z.).
The authors declare no competing financial interests.
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Zheng, Z., Ni, R., Wang, F. et al. Structural signatures of dynamic heterogeneities in monolayers of colloidal ellipsoids. Nat Commun 5, 3829 (2014). https://doi.org/10.1038/ncomms4829
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