Chemical biologists frequently aim to create small-molecule probes that interact with a specific protein in vitro in order to explore the role of the protein in a broader biological context (cells or organisms), but a common understanding of what makes a high-quality probe is lacking. Here I propose a set of principles to guide probe qualification.
This is a preview of subscription content, access via your institution
Relevant articles
Open Access articles citing this article.
-
Systematic literature review reveals suboptimal use of chemical probes in cell-based biomedical research
Nature Communications Open Access 03 June 2023
-
Pharmacological inhibition of Lin28 promotes ketogenesis and restores lipid homeostasis in models of non-alcoholic fatty liver disease
Nature Communications Open Access 26 December 2022
-
Exploiting vulnerabilities of SWI/SNF chromatin remodelling complexes for cancer therapy
Oncogene Open Access 03 May 2021
Access options
Subscribe to this journal
Receive 12 print issues and online access
$259.00 per year
only $21.58 per issue
Rent or buy this article
Prices vary by article type
from$1.95
to$39.95
Prices may be subject to local taxes which are calculated during checkout
References
Oprea, T.I. et al. Nat. Chem. Biol. 5, 441–447 (2009).
Edwards, A.M., Bountra, C., Kerr, D.J. & Willson, T.M. Nat. Chem. Biol. 5, 436–440 (2009).
Weiss, W.A., Taylor, S.S. & Shokat, K.M. Nat. Chem. Biol. 3, 739–744 (2007).
Kaiser, J. Science 321, 764–766 (2008).
Tanramluk, D., Schreyer, A., Pitt, W.R. & Blundell, T.L. Chem. Biol. Drug Des. 74, 16–24 (2009).
Karaman, M.W. et al. Nat. Biotechnol. 26, 127–132 (2008).
Seidler, J., McGovern, S.L., Doman, T.N. & Shoichet, B.K. J. Med. Chem. 46, 4477–4486 (2003).
Rix, U. & Superti-Furga, G. Nat. Chem. Biol. 5, 616–624 (2009).
Nolen, B.J. et al. Nature 460, 1031–1034 (2009).
Huang, S.-M.A. et al. Nature 461, 614–620 (2009).
Frye, S.V. & Johnson, G.L. Nat. Chem. Biol. 5, 448–449 (2009).
Okuzumi, T. et al. Nat. Chem. Biol. 5, 484–493 (2009).
Cameron, A.J., Escribano, C., Saurin, A.T., Kostelecky, B. & Parker, P.J. Nat. Struct. Mol. Biol. 16, 624–630 (2009).
Author information
Authors and Affiliations
Corresponding author
Ethics declarations
Competing interests
The author declares no competing financial interests.
Rights and permissions
About this article
Cite this article
Frye, S. The art of the chemical probe. Nat Chem Biol 6, 159–161 (2010). https://doi.org/10.1038/nchembio.296
Issue Date:
DOI: https://doi.org/10.1038/nchembio.296
This article is cited by
-
Systematic literature review reveals suboptimal use of chemical probes in cell-based biomedical research
Nature Communications (2023)
-
Pharmacological inhibition of Lin28 promotes ketogenesis and restores lipid homeostasis in models of non-alcoholic fatty liver disease
Nature Communications (2022)
-
A chemical probe targeting the PWWP domain alters NSD2 nucleolar localization
Nature Chemical Biology (2022)
-
Antihypertensive treatment guided by genetics: PEARL-HT, the randomized proof-of-concept trial comparing rostafuroxin with losartan
The Pharmacogenomics Journal (2021)
-
Exploiting vulnerabilities of SWI/SNF chromatin remodelling complexes for cancer therapy
Oncogene (2021)