Abstract
The reversible attachment of a small-molecule drug to a carrier for targeted delivery can improve pharmacokinetics and the therapeutic index. Previous studies have reported the delivery of molecules that contain primary and secondary amines via an amide or carbamate bond; however, the ability to employ tertiary-amine-containing bioactive molecules has been elusive. Here we describe a bioreversible linkage based on a quaternary ammonium that can be used to connect a broad array of tertiary and heteroaryl amines to a carrier protein. Using a concise, protecting-group-free synthesis we demonstrate the chemoselective modification of 12 complex molecules that contain a range of reactive functional groups. We also show the utility of this connection with both protease-cleavable and reductively cleavable antibody–drug conjugates that were effective and stable in vitro and in vivo. Studies with a tertiary-amine-containing antibiotic show that the resulting antibody–antibiotic conjugate provided appropriate stability and release characteristics and led to an unexpected improvement in activity over the conjugates previously connected via a carbamate.
This is a preview of subscription content, access via your institution
Relevant articles
Open Access articles citing this article.
-
Machine learning-driven multifunctional peptide engineering for sustained ocular drug delivery
Nature Communications Open Access 02 May 2023
-
Decatungstate-catalyzed radical disulfuration through direct C-H functionalization for the preparation of unsymmetrical disulfides
Nature Communications Open Access 06 July 2022
-
Unsymmetrical polysulfidation via designed bilateral disulfurating reagents
Nature Communications Open Access 20 August 2020
Access options
Subscribe to this journal
Receive 12 print issues and online access
$259.00 per year
only $21.58 per issue
Rent or buy this article
Prices vary by article type
from$1.95
to$39.95
Prices may be subject to local taxes which are calculated during checkout






Change history
03 November 2016
In the version of this Article originally published, the structure of tubulysin was shown three times in Figure 5 and in each instance the five-membered ring was missing a nitrogen atom. This has been corrected in the online versions of this Article.
References
Pérez-Herrero, E. & Fernández-Medarde, A. Advanced targeted therapies in cancer: drug nanocarriers, the future of chemotherapy. Eur. J. Pharm. Biopharm. 93, 52–79 (2015).
Chari, R. V. J., Miller, M. L. & Widdison, W. C. Antibody–drug conjugates: an emerging concept in cancer therapy. Angew. Chem. Int. Ed. 53, 3796–3827 (2014).
Kratz, F., Müller, I. A., Ryppa, C. & Warnecke, A. Prodrug strategies in anticancer chemotherapy. ChemMedChem 3, 20–53 (2008).
Guillemard, V. & Uri Saragovi, H. Prodrug chemotherapeutics bypass P-glycoprotein resistance and kill tumors in vivo with high efficacy and target-dependent selectivity. Oncogene 23, 3613–3621 (2004).
Dubikovskaya, E. A., Thorne, S. H., Pillow, T. H., Contag, C. H. & Wender, P. A. Overcoming multidrug resistance of small-molecule therapeutics through conjugation with releasable octaarginine transporters. Proc. Natl Acad. Sci. USA 105, 12128–12133 (2008).
Kirtane, A. R., Kalscheuer, S. M. & Panyam, J. Exploiting nanotechnology to overcome tumor drug resistance: challenges and opportunities. Adv. Drug Deliv. Rev. 65, 1731–1747 (2013).
Kratz, F., Abu Ajaj, K. & Warnecke, A. Anticancer carrier-linked prodrugs in clinical trials. Expert Opin. Invest. Drugs 16, 1037–1058 (2007).
Van Bambeke, F., Barcia-Macay, M., Lemaire, S. & Tulkens, P. M. Cellular pharmacodynamics and pharmacokinetics of antibiotics: current views and perspectives. Curr. Opin. Drug Discov. Dev. 9, 218–230 (2006).
Lehar, S. M. et al. Novel antibody–antibiotic conjugate eliminates intracellular S. aureus. Nature 527, 323–328 (2015).
Wang, R. E. et al. An immunosuppressive antibody–drug conjugate. J. Am. Chem. Soc. 137, 3229–3232 (2015).
Dubowchik, G. M. & Firestone, R. A. Cathepsin B-sensitive dipeptide prodrugs. 1. A model study of structural requirements for efficient release of doxorubicin. Bioorg. Med. Chem. Lett. 8, 3341–3346 (1998).
Carl, P. L., Chakravarty, P. K. & Katzenellenbogen, J. A. A novel connector linkage applicable in prodrug design. J. Med. Chem. 24, 479–480 (1981).
Doronina, S. O. et al. Development of potent monoclonal antibody auristatin conjugates for cancer therapy. Nat. Biotechnol. 21, 778–784 (2003).
Gromek, S. M. & Balunas, M. J. Natural products as exquisitely potent cytotoxic payloads for antibody–drug conjugates. Curr. Top. Med. Chem. 14, 2822–2834 (2015).
Adem, Y. T. et al. Auristatin antibody–drug conjugate physical instability and the role of drug payload. Bioconjugate Chem. 25, 656–664 (2014).
Chennamsetty, N., Voynov, V., Kayser, V., Helk, B. & Trout, B. L. Design of therapeutic proteins with enhanced stability. Proc. Natl Acad. Sci. USA 106, 11937–11942 (2009).
Zhao, R. Y. et al. Synthesis and evaluation of hydrophilic linkers for antibody–maytansinoid conjugates. J. Med. Chem. 54, 3606–3623 (2011).
Jeffrey, S. C. et al. Design, synthesis, and in vitro evaluation of dipeptide-based antibody minor groove binder conjugates. J. Med. Chem. 48, 1344–1358 (2005).
Xiao, J., Burn, A. & Tolbert, T. J. Increasing solubility of proteins and peptides by site-specific modification with betaine. Bioconjugate Chem. 19, 1113–1118 (2008).
Stephanopoulos, N. & Francis, M. B. Choosing an effective protein bioconjugation strategy. Nat. Chem. Biol. 7, 876–884 (2011).
Agarwal, P. & Bertozzi, C. R. Site-specific antibody–drug conjugates: the nexus of bioorthogonal chemistry, protein engineering, and drug development. Bioconjugate Chem. 26, 176–192 (2015).
Spicer, C. D. & Davis, B. G. Selective chemical protein modification. Nat. Commun. 5, 4740 (2014).
Russell, G. A. & Danen, W. C. Electron-transfer processes. VIII. Coupling reactions of radicals with carbanions. J. Am. Chem. Soc. 90, 347–353 (1968).
Stock, L. M. & Wasielewski, M. R. Electron paramagnetic resonance spectra of α-substituted nitrotoluene anion radicals. Influence of electron-withdrawing substituents on the coupling constants for β-hydrogen atoms. J. Am. Chem. Soc. 97, 5620–5622 (1975).
Tercel, M., Wilson, W. R. & Denny, W. A. Nitrobenzyl mustard quaternary salts: a new class of hypoxia-selective cytotoxins showing very high in vitro selectivity. J. Med. Chem. 36, 2578–2579 (1993).
Hansch, C., Leo, A. & Taft, R. W. A survey of Hammett substituent constants and resonance and field parameters. Chem. Rev. 91, 165–195 (1991).
Mohamed, M. M. & Sloane, B. F. Cysteine cathepsins: multifunctional enzymes in cancer. Nat. Rev. Cancer 6, 764–775 (2006).
Musil, D. et al. The refined 2.15 Å X-ray crystal structure of human liver cathepsin B: the structural basis for its specificity. EMBO J. 10, 2321–2330 (1991).
Pettit, G. R. et al. The isolation and structure of a remarkable marine animal antineoplastic constituent: dolastatin 10. J. Am. Chem. Soc. 109, 6883–6885 (1987).
Maderna, A. et al. Discovery of cytotoxic dolastatin 10 analogues with N-terminal modifications. J. Med. Chem. 57, 10527–10543 (2014).
Steinmetz, H. et al. Isolation, crystal and solution structure determination, and biosynthesis of tubulysins—powerful inhibitors of tubulin polymerization from myxobacteria. Angew. Chem. Int. Ed. 43, 4888–4892 (2004).
Barker, T. J., Duncan, K. K., Otrubova, K. & Boger, D. L. Potent vinblastine C20′ ureas displaying additionally improved activity against a vinblastine-resistant cancer cell line. ACS Med. Chem. Lett. 4, 985–988 (2013).
Laguzza, B. C. et al. New antitumor monoclonal antibody–vinca conjugates LY203725 and related compounds: design, preparation, and representative in vivo activity. J. Med. Chem. 32, 548–555 (1989).
Henry, G. D. De novo synthesis of substituted pyridines. Tetrahedron 60, 6043–6061 (2004).
Wienecke, A. & Bacher, G. Indibulin, a novel microtubule inhibitor, discriminates between mature neuronal and nonneuronal tubulin. Cancer Res. 69, 171–177 (2009).
Pauli, J. et al. Suitable labels for molecular imaging—influence of dye structure and hydrophilicity on the spectroscopic properties of IgG conjugates. Bioconjugate Chem. 22, 1298–1308 (2011).
Flygare, J. A . et al. Peptidomimetic compounds and antibody–drug conjugates thereof. World Intellectual Property Organization patent 2015/095227 A2 (2015).
Jones, L. R., et al. Releasable luciferin-transporter conjugates: tools for the real-time analysis of cellular uptake and release. J. Am. Chem. Soc. 128, 6526–6527 (2006).
Yang, J., Chen, H., Vlahov, I. R., Cheng, J.-X. & Low, P. S. Evaluation of disulfide reduction during receptor-mediated endocytosis by using FRET imaging. Proc. Natl Acad. Sci. USA 103, 13872–13877 (2006).
Vlahov, I. R. et al. An assembly concept for the consecutive introduction of unsymmetrical disulfide bonds: synthesis of a releasable multidrug conjugate of folic acid. J. Org. Chem. 72, 5968–5972 (2007).
Pillow, T. et al. Decoupling stability and release in disulfide bonds with antibody-small molecule conjugates. Chem. Sci. http://dx.doi.org/10.1039/C6SC01831A (2016).
Miles, L. W. C. & Owen, L. N. 149. Dithiols. part XII. The alkaline hydrolysis of acetylated hydroxy-thiols: a new reaction for the formation of cyclic sulphides. J. Chem. Soc. http://dx.doi.org/10.1039/JR9520000817 (1952).
Satyam, A. Design and synthesis of releasable folate–drug conjugates using a novel heterobifunctional disulfide-containing linker. Bioorg. Med. Chem. Lett. 18, 3196–3199 (2008).
Junutula, J. R. et al. Site-specific conjugation of a cytotoxic drug to an antibody improves the therapeutic index. Nat. Biotechnol. 26, 925–932 (2008).
Acknowledgements
We thank F. Fan, Z. Xu, J. Wai, H. Raab, B. Lin, K. Xu and A. Deese for helping in the preparation and analysis of the materials used in the study, and S. Spencer and R. Rowntree for coordinating the studies.
Author information
Authors and Affiliations
Contributions
L.R.S., S.G.K., X.L., T.W., J.C. and T.H.P. designed and/or synthesized the linker–drug conjugates. S.M.L. designed, executed and analysed data for the in vitro antibiotic experiment. R.V. characterized cathepsin cleavage of linker–drug conjugates and ADCs. D.Z. characterized GSH reduction of the disulfide linker–drug conjugate. J.C. characterized the in vitro potency of cytotoxic ADCs. S.-F.Y. designed and analysed data for in vivo efficacy. C.N. characterized and analysed data for in vivo stability. J.G. characterized the potency of the free cytotoxic drugs. Y.L. confirmed the structure of linker–drug conjugates through NMR studies. A.F.-O. characterized the conjugate stability in whole blood. M.G. performed in vivo efficacy experiments. N.L.S. purified and characterized an antibiotic linker–drug conjugate. B.W. designed a peptidomimetic linker. G.D.L.P, K.X., K.R.K, S.M., J.A.F. and T.H.P. led groups on the project responsible for chemistry, biology and in vitro or in vivo characterization. T.H.P. conceived and initiated the project. T.H.P. wrote the manuscript with help and input from all of the authors.
Corresponding author
Ethics declarations
Competing interests
All authors are full time employees of Genentech or WuXi AppTec.
Supplementary information
Supplementary information
Supplementary information (PDF 6227 kb)
Rights and permissions
About this article
Cite this article
Staben, L., Koenig, S., Lehar, S. et al. Targeted drug delivery through the traceless release of tertiary and heteroaryl amines from antibody–drug conjugates. Nature Chem 8, 1112–1119 (2016). https://doi.org/10.1038/nchem.2635
Received:
Accepted:
Published:
Issue Date:
DOI: https://doi.org/10.1038/nchem.2635
This article is cited by
-
Machine learning-driven multifunctional peptide engineering for sustained ocular drug delivery
Nature Communications (2023)
-
Synthesis and cytotoxic activity of N-[(alkylsulfanyl)methyl]- and N-[(arylsulfanyl)methyl]benzamides
Russian Chemical Bulletin (2023)
-
Decatungstate-catalyzed radical disulfuration through direct C-H functionalization for the preparation of unsymmetrical disulfides
Nature Communications (2022)
-
ortho-Quinone drugs go pro
Nature Chemistry (2022)
-
Anti-bacterial monoclonal antibodies: next generation therapy against superbugs
Applied Microbiology and Biotechnology (2022)