CCCTC-binding factor (CTCF) sites are enriched at the boundaries of topologically associated domains (TADs), but their function within TADs is unclear. Removal of sub-TAD CTCF sites adjacent to the α-globin enhancers is now shown to result in inappropriate activation of neighbouring genes. Intra-TAD enhancer insulation might be broadly important for tissue specificity of enhancers.
This is a preview of subscription content, access via your institution
Access options
Access Nature and 54 other Nature Portfolio journals
Get Nature+, our best-value online-access subscription
$29.99 / 30 days
cancel any time
Subscribe to this journal
Receive 12 print issues and online access
$209.00 per year
only $17.42 per issue
Buy this article
- Purchase on Springer Link
- Instant access to full article PDF
Prices may be subject to local taxes which are calculated during checkout
References
Dixon, J. R. et al. Nature 485, 376–380 (2012).
Nora, E. P. et al. Nature 485, 381–385 (2012).
Rao, S. S. et al. Cell 159, 1665–1680 (2014).
Lupianez, D. G. et al. Cell 161, 1012–1025 (2015).
Hnisz, D. et al. Science 351, 1454–1458 (2016).
Narendra, V., Bulajic, M., Dekker, J., Mazzoni, E. O. & Reinberg, D. Genes Dev. 30, 2657–2662 (2016).
Phillips-Cremins, J. E. et al. Cell 153, 1281–1295 (2013).
Li, G. et al. Cell 148, 84–98 (2012).
Hanssen, L. L. P. et al. Nat. Cell Biol. 19, 952–961 (2017).
Hay, D. et al. Nat. Genet. 48, 895–903 (2016).
Guo, Y. et al. Cell 162, 900–910 (2015).
Davies, J. O. et al. Nat. Methods 13, 74–80 (2016).
Noordermeer, D. et al. Nat. Cell Biol. 13, 944–951 (2011).
Plank, J. L. & Dean, A. Mol. Cell 55, 5–14 (2014).
Lower, K. M. et al. Proc. Natl Acad. Sci. USA 106, 21771–21776 (2009).
Author information
Authors and Affiliations
Corresponding author
Ethics declarations
Competing interests
The authors declare no competing financial interests.
Rights and permissions
About this article
Cite this article
Krivega, I., Dean, A. CTCF fences make good neighbours. Nat Cell Biol 19, 883–885 (2017). https://doi.org/10.1038/ncb3584
Published:
Issue Date:
DOI: https://doi.org/10.1038/ncb3584
This article is cited by
-
Understanding breast cancer heterogeneity through non-genetic heterogeneity
Breast Cancer (2021)