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Fruit-specific RNAi-mediated suppression of DET1 enhances carotenoid and flavonoid content in tomatoes

Abstract

Tomatoes are a principal dietary source of carotenoids and flavonoids, both of which are highly beneficial for human health1,2. Overexpression of genes encoding biosynthetic enzymes or transcription factors have resulted in tomatoes with improved carotenoid or flavonoid content, but never with both3,4,5,6,7. We attempted to increase tomato fruit nutritional value by suppressing an endogenous photomorphogenesis regulatory gene, DET1, using fruit-specific promoters combined with RNA interference (RNAi) technology. Molecular analysis indicated that DET1 transcripts were indeed specifically degraded in transgenic fruits. Both carotenoid and flavonoid contents were increased significantly, whereas other parameters of fruit quality were largely unchanged. These results demonstrate that manipulation of a plant regulatory gene can simultaneously influence the production of several phytonutrients generated from independent biosynthetic pathways, and provide a novel example of the use of organ-specific gene silencing to improve the nutritional value of plant-derived products.

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Figure 1: Fruit-specific phenotypes of T2 generation transgenic plants containing a TDET1 inverted-repeat transgene driven by different promoters.
Figure 2: Analysis of TDET1 RNA in transgenic plants containing fruit-specific promoter constructs.
Figure 3: Quantification of carotenoid and flavonoid contents in red-ripe fruits from T56 (wild type, WT) and different lines of T2 generation plants containing fruit-specific promoter constructs.

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References

  1. Miller, E.C. et al. Lycopene, tomato products, and prostate cancer prevention. Have we established causality? Pure Appl. Chem. 74, 1435–1441 (2002).

    Article  CAS  Google Scholar 

  2. Ross, J.A. & Kasum, C.M. Dietary flavonoids: bioavailability, metabolic effects and safety. Annu. Rev. Nutr. 22, 19–34 (2002).

    Article  CAS  Google Scholar 

  3. Romer, S. et al. Elevation of the provitamin A content of transgenic tomato plants. Nat. Biotechnol. 18, 666–669 (2000).

    Article  CAS  Google Scholar 

  4. Fraser, P.D. et al. Evaluation of transgenic tomato plants expressing an additional phytoene synthase in a fruit-specific manner. Proc. Natl. Acad. Sci. USA 99, 1092–1097 (2002).

    Article  CAS  Google Scholar 

  5. Muir, S.R. et al. Overexpression of petunia chalcone isomerase in tomato results in fruit containing increased levels of flavonols. Nat. Biotechnol. 19, 470–474 (2001).

    Article  CAS  Google Scholar 

  6. Niggeweg, R., Michael, A.J. & Martin, C. Engineering plants with increased levels of the antioxidant chlorogenic acid. Nat. Biotechnol. 22, 746–754 (2004).

    Article  CAS  Google Scholar 

  7. Bovy, A. et al. High-flavonol tomatoes resulting from heterologous expression of the maize transcription factor genes LC and C1 . Plant Cell 14, 2509–2526 (2002).

    Article  CAS  Google Scholar 

  8. Key, T.J., Allen, N.E., Spencer, E.A. & Travis, R.C. The effect of diet on risk of cancer. Lancet 360, 861–868 (2002).

    Article  CAS  Google Scholar 

  9. Cooper, D.A. Carotenoids in health and disease: recent scientific evaluations, research recommendations and the consumer. J. Nutr. 134, 221–224 (2004).

    Article  Google Scholar 

  10. Kucuk, O. et al. Lycopene in the treatment of prostate cancer. Pure Appl. Chem. 74, 1443–1450 (2002).

    Article  CAS  Google Scholar 

  11. Heber, D. & Lu, Q.Y. Overview of mechanisms of action of lycopene. Exp. Biol. Med. 227, 920–923 (2002).

    Article  CAS  Google Scholar 

  12. Humphrey, J.H., West, K.P., Jr. & Sommer, A. Vitamin A deficiency and attributable mortality among under 5 year olds. Bull. World Health Organ. 70, 225–232 (1992).

    CAS  PubMed  PubMed Central  Google Scholar 

  13. Rice-Evans, C.A., Millier, N.J. & Paganga, G. Antioxidant properties of phenolic compounds. Trends Plant Sci. 2, 2152–2159 (1997).

    Article  Google Scholar 

  14. DellaPenna, D. Plant metabolic engineering. Plant Physiol. 125, 160–163 (2001).

    Article  CAS  Google Scholar 

  15. Giovannoni, J. Molecular biology of fruit maturation and ripening. Annu. Rev. Plant Physiol. Plant Mol. Biol. 52, 725–749 (2001).

    Article  CAS  Google Scholar 

  16. Adams-Phillips, L., Barry, C. & Giovannoni, J. Signal transduction systems regulating fruit ripening. Trends Plant Sci. 9, 331–338 (2004).

    Article  CAS  Google Scholar 

  17. Schafer, E. & Bowler, C. Phytochrome-mediated photoperception and signal transduction in higher plants. EMBO Rep. 3, 1042–1048 (2002).

    Article  CAS  Google Scholar 

  18. Mustilli, A.C., Fenzi, F., Ciliento, R., Alfano, F. & Bowler, C. Phenotype of the tomato high pigment-2 mutant is caused by a mutation in the tomato homolog of DEETIOLATED1 . Plant Cell 11, 145–157 (1999).

    Article  CAS  Google Scholar 

  19. Levin, I., Frankel, P., Gilboa, N., Tanny, S. & Lalazar, A. The tomato dark green mutation is a novel allele of the tomato homolog of the DEETIOLATED1 gene. Theor. Appl. Genet. 106, 454–460 (2003).

    Article  CAS  Google Scholar 

  20. Yen, H.C. et al. The tomato high-pigment (hp) locus maps to chromosome 2 and influences plastome copy number and fruit quality. Theor. Appl. Genet. 95, 1069–1079 (1997).

    Article  CAS  Google Scholar 

  21. Bino, R.J. et al. The light-hyperresponsive high pigment-2dg mutation of tomato: alterations in the fruit metabolome. New Phytol. 166, 427–438 (2005).

    Article  CAS  Google Scholar 

  22. Davuluri, G.R. et al. Manipulation of DET1 expression in tomato results in photomorphogenic phenotypes caused by post-transcriptional gene silencing. Plant J. 40, 344–354 (2004).

    Article  CAS  Google Scholar 

  23. Pear, J.R., Ridge, N., Rasmussen, R., Rose, R.E. & Houck, C.M. Isolation and characterization of a fruit-specific cDNA and the corresponding genomic clone from tomato. Plant Mol. Biol. 13, 639–651 (1989).

    Article  CAS  Google Scholar 

  24. Santino, C.G., Stanford, G.L. & Conner, T.W. Developmental and transgenic analysis of two tomato fruit enhanced genes. Plant Mol. Biol. 33, 405–416 (1997).

    Article  CAS  Google Scholar 

  25. Dunsmuir, P. & Stott, J. P119 promoter and their uses. US patent 5,633,440 (1997).

  26. Baulcombe, D. RNA silencing in plants. Nature 431, 356–363 (2004).

    Article  CAS  Google Scholar 

  27. Hamilton, A.J. & Baulcombe, D.C. A novel species of small antisense RNA in post-transcriptional gene silencing. Science 286, 950–952 (1999).

    Article  CAS  Google Scholar 

  28. Giliberto, L. et al. Manipulation of the blue light photoreceptor cryptochrome 2 in tomato affects vegetative development, flowering time, and fruit antioxidant content. Plant Physiol. 137, 199–208 (2005).

    Article  CAS  Google Scholar 

  29. Paine, J.A. et al. Improving the nutritional value of Golden Rice through increased pro-vitamin A content. Nat. Biotechnol. 23, 482–487 (2005).

    Article  CAS  Google Scholar 

  30. Wesley, S.V. et al. Construct design for efficient, effective and high-throughput gene silencing in plants. Plant J. 27, 581–590 (2001).

    Article  CAS  Google Scholar 

  31. Burgess, D.G. et al. A novel, two-component system for cell lethality and its use in engineering nuclear male-sterility in plants. Plant J. 31, 113–125 (2002).

    Article  CAS  Google Scholar 

  32. McCormick, S. Transformation of tomato with Agrobacterium tumefaciens . Plant Tissue Culture Manual B 6, 1–9 (1991).

    Google Scholar 

  33. Yoder, J.I., Palys, J., Alpert, K. & Lassner, M. Ac transposition in transgenic tomato plants. Mol. Gen. Genet. 213, 291–296 (1988).

    Article  CAS  Google Scholar 

Download references

Acknowledgements

This work was supported by Seminis Vegetable Seeds Inc., and by funding from the European Union (contract QLK5-CT-2000-00357), the Italian Ministry for Research and Education (FIRB contract RBNE01CFKB) to C.B. P.D.F. and P.M.B. acknowledge financial support from the UK Biotechnology and Biological Sciences Research Council (C19322).

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Correspondence to Chris Bowler.

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Davuluri, G., van Tuinen, A., Fraser, P. et al. Fruit-specific RNAi-mediated suppression of DET1 enhances carotenoid and flavonoid content in tomatoes. Nat Biotechnol 23, 890–895 (2005). https://doi.org/10.1038/nbt1108

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