Skip to main content

Thank you for visiting nature.com. You are using a browser version with limited support for CSS. To obtain the best experience, we recommend you use a more up to date browser (or turn off compatibility mode in Internet Explorer). In the meantime, to ensure continued support, we are displaying the site without styles and JavaScript.

  • Research Paper
  • Published:

Removal of a Proteolytic Activity Associated with Aggregates Formed from Expression of Creatine Kinase in Escherichia coli Leads to Improved Recovery of Active Enzyme

Abstract

Expression of creatine kinase (CK) from a Torpedo californica electric organ cDNA in Escherichia coli results in an insoluble protein product with no detectable CK activity. Although this is a stable aggregate that can be isolated in an enriched form by centrifugation, initial attempts to generate enzyme activity by denaturing and refolding yielded only minute amounts of active protein. We find that these low recoveries are due to proteolysis of the CK during denaturation and refolding. While this proteolytic activity is not inhibited by either phenylmethanesulfonyl fluoride (PMSF) or EDTA, it can be largely removed from the CK aggregate by extraction with a detergent-containing buffer prior to denaturation. This treatment improves the recovery of active CK approximately 100-fold. We have also found similar proteolytic activity associated with the aggregate formed when a mutant of bovine pancreatic trypsin inhibitor (BPTI) is expressed in E. coli. Discovery of this proteolytic activity in two different expression systems suggests that it should be considered as a potential problem for recovery of active protein from other inclusion bodies as well.

This is a preview of subscription content, access via your institution

Access options

Buy this article

Prices may be subject to local taxes which are calculated during checkout

Similar content being viewed by others

References

  1. West, B.L., Babbitt, P.C., Mendez, B. and Baxter, J.D. 1984. Creatine kinase protein sequence encoded by a cDNA made from Torpedo californica electric organ mRNA. Proc. Natl. Acad. Sci. USA. 81: 7007–7011.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  2. Weir, M.P. and Sparks, J. 1987. Purification and renaturation of recombinant human interleukin-2. Biochem. J. 245: 5–91.

    Article  Google Scholar 

  3. Sharma, S.K., Evans, D.B., Tomich, C.-S.C., Cornette, J.C. and Ulrich, R.G. 1987. Folding and activation of recombinant human prorenin. Biotech. Appld. Biochem. 9: 181–193.

    CAS  Google Scholar 

  4. Mitraki, A. and King, J. 1989. Protein folding intermediates and inclusion body formation. Bio/Technology 7: 690–697.

    CAS  Google Scholar 

  5. Marston, F.A.O. 1986. The purification of eukaryotic polypeptides synthesized in Escherichia coli. Biochem. J. 240: 1–12.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  6. Schein, C.H. 1990. Solubility as a function of protein structure and solvent components. Bio/Technology 8: 308–317.

    CAS  Google Scholar 

  7. Schein, C.H. 1989. Production of soluble recombinant proteins in bacteria. Bio/Technology 7: 1141–1149.

    CAS  Google Scholar 

  8. Marston, F.A.O. 1987. The purification of eukaryotic polypeptides expressed in Escherichia coli 59–88. In: DNA Cloning: a Practical Approach (Vol. 3). Glover, D.M. (Ed.). IRL Press, Oxford, United Kingdom.

    Google Scholar 

  9. Lim, W.K., Smith-Somerville, H.E. and Hardman, J.K. 1989. Solubilization and renaturation of overexpressed aggregates of mutant tryptophan synthase α-subunits. Appl. Environ. Microbiol. 55: 1106–1111.

    CAS  PubMed  PubMed Central  Google Scholar 

  10. Hoess, A., Arthur, A.K., Wanner, G. and Fanning, E. 1988. Recovery of soluble, biologically active recombinant proteins from total bacterial lysates using ion exchange resins. Bio/Technology 6: 1214–1217.

    Article  CAS  Google Scholar 

  11. Bolyard, M.G. and Lord, S.T. 1988. High-level expression of a functional human fibrinogen gamma chain in Escherichia coli. Gene 66: 183–192.

    Article  CAS  PubMed  Google Scholar 

  12. Nagai, K. and Thøgerson, H.C. Synthesis and sequence-specific proteolysis of hybrid proteins produced in Escherichia coli. Meth. in Enzymol. 153: 461–481.

  13. Altman, J., Nilsson, B., Anderson, S. and Kuntz, I.D. 1990. Manuscript in preparation.

  14. Babbitt, P.C., West, B.L., Kuntz, I.D. and Kenyon, G.L. 1988. Purification of the insoluble aggregate obtained from the expression of creatine kinase in E. coli yields greatly improved specific activity in the refolded protein. Biochem. 27: 3093.

    Google Scholar 

  15. Holmes, D.S. and Quigley, M. 1981. A rapid boiling method for the preparation of bacterial plasmids. Anal. Biochem. 114: 193–197.

    Article  CAS  PubMed  Google Scholar 

  16. Hartley, D.L. and Kane, J.F. 1988. Properties of inclusion bodies from recombinant Escherichia coli. Biochem. Soc. Trans. 16: 101–102.

    Article  CAS  PubMed  Google Scholar 

  17. Babbitt, P.C., West, B.L., Buechter, D.D., Chen, L.H., Kuntz, I.D. and Kenyon, G.L. Recovery of active creatine kinase refolded from inclusion bodies in Escherichia coli can be improved by removal of a contaminating protease. In: Protein Refolding. Georgiou, G. (Ed.). American Chemical Society, New York. In press.

  18. Amann, E., Brosius, J. and Ptashne, M. 1983. Vectors bearing a hybrid trp-lac promoter useful for regulated expression of cloned genes in Escherichia coli. Gene 25: 167–178.

    Article  CAS  PubMed  Google Scholar 

  19. Meselson, M. and Yuan, R. 1968. DNA restriction enzyme from E. coli. Nature 217: 1110–1114.

    Article  CAS  PubMed  Google Scholar 

  20. Grossman, S.H., Pyle, J. and Steiner, R.J. 1981. Kinetic evidence for active monomers during the reassembly of denatured creatine kinase. Biochem. 20: 6122–6128.

    Article  CAS  Google Scholar 

  21. Creighton, T.E. and Goldenberg, D.P. 1984. Folding pathway of a circular form of bovine pancreatic trypsin inhibitor. J. Mol. Biol. 179: 497–526.

    Article  CAS  PubMed  Google Scholar 

  22. Lowry, O.H., Rosebrough, N.J., Farr, A.L. and Randall, R.J. 1951. Protein measurement with the folin phenol reagent. J. Biol. Chem. 193: 265–275.

    CAS  PubMed  Google Scholar 

  23. Bradford, M.M. 1976. A rapid and sensitive method for the quantita-tion of microgram quantities of protein utilizing the principle of protein-dye binding. Anal. Chem. 72: 248–254.

    CAS  Google Scholar 

  24. Tanzer, M.L. and Gilvarg, C.J. 1959. Creatine and creatine kinase measurement. J. Biol. Chem. 234: 3201–3204.

    CAS  PubMed  Google Scholar 

  25. Laemmli, U.K. 1970. Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature 227: 680–685.

    Article  CAS  PubMed  Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Rights and permissions

Reprints and permissions

About this article

Cite this article

Babbitt, P., West, B., Buechter, D. et al. Removal of a Proteolytic Activity Associated with Aggregates Formed from Expression of Creatine Kinase in Escherichia coli Leads to Improved Recovery of Active Enzyme. Nat Biotechnol 8, 945–949 (1990). https://doi.org/10.1038/nbt1090-945

Download citation

  • Received:

  • Accepted:

  • Issue Date:

  • DOI: https://doi.org/10.1038/nbt1090-945

Search

Quick links

Nature Briefing

Sign up for the Nature Briefing newsletter — what matters in science, free to your inbox daily.

Get the most important science stories of the day, free in your inbox. Sign up for Nature Briefing