Skip to main content

Thank you for visiting nature.com. You are using a browser version with limited support for CSS. To obtain the best experience, we recommend you use a more up to date browser (or turn off compatibility mode in Internet Explorer). In the meantime, to ensure continued support, we are displaying the site without styles and JavaScript.

  • Letter
  • Published:

Evolutionary implications of a third lymphocyte lineage in lampreys

Abstract

Jawed vertebrates (gnathostomes) and jawless vertebrates (cyclostomes) have different adaptive immune systems1,2. Gnathostomes use T- and B-cell antigen receptors belonging to the immunoglobulin superfamily3,4. Cyclostomes, the lampreys and hagfish, instead use leucine-rich repeat proteins to construct variable lymphocyte receptors (VLRs), two types of which, VLRA and VLRB, are reciprocally expressed by lymphocytes resembling gnathostome T and B cells5,6,7. Here we define another lineage of T-cell-like lymphocytes that express the recently identified VLRC receptors8,9. Both VLRC+ and VLRA+ lymphocytes express orthologues of genes that gnathostome γδ and αβ T cells use for their differentiation, undergo VLRC and VLRA assembly and repertoire diversification in the ‘thymoid’ gill region, and express their VLRs solely as cell-surface proteins. Our findings suggest that the genetic programmes for two primordial T-cell lineages and a prototypic B-cell lineage were already present in the last common vertebrate ancestor approximately 500 million years ago. We propose that functional specialization of distinct T-cell-like lineages was an ancient feature of a primordial immune system.

This is a preview of subscription content, access via your institution

Access options

Buy this article

Prices may be subject to local taxes which are calculated during checkout

Figure 1: Tissue distribution of VLRA+, VLRB+ and VLRC+ lymphocytes.
Figure 2: Antigen and mitogen responses.
Figure 3: Gene-expression profiles of VLRA+, VLRB+ and VLRC+ lymphocytes and their poly(I:C) responses.
Figure 4: Analysis of VLRC, VLRA and VLRB transcription and assembly.

Similar content being viewed by others

Accession codes

Accessions

GenBank/EMBL/DDBJ

Data deposits

Sequence data have been deposited in GenBank/EMBL/DDBJ databases under accession numbers KF385949KF385955.

References

  1. Flajnik, M. F. & Kasahara, M. Origin and evolution of the adaptive immune system: genetic events and selective pressures. Nature Rev. Genet. 11, 47–59 (2010)

    Article  CAS  Google Scholar 

  2. Litman, G. W., Rast, J. P. & Fugmann, S. D. The origins of vertebrate adaptive immunity. Nature Rev. Immunol. 10, 543–553 (2010)

    Article  CAS  Google Scholar 

  3. Tonegawa, S. Somatic generation of antibody diversity. Nature 302, 575–581 (1983)

    Article  ADS  CAS  Google Scholar 

  4. Davis, M. M. & Bjorkman, P. J. T-cell antigen receptor genes and T-cell recognition. Nature 334, 395–402 (1988)

    Article  ADS  CAS  Google Scholar 

  5. Guo, P. et al. Dual nature of the adaptive immune system in lampreys. Nature 459, 796–801 (2009)

    Article  ADS  CAS  Google Scholar 

  6. Hirano, M., Das, S., Guo, P. & Cooper, M. D. The evolution of adaptive immunity in vertebrates. Adv. Immunol. 109, 125–157 (2011)

    Article  CAS  Google Scholar 

  7. Boehm, T. et al. VLR-based adaptive immunity. Annu. Rev. Immunol. 30, 203–220 (2012)

    Article  CAS  Google Scholar 

  8. Kasamatsu, J. et al. Identification of a third variable lymphocyte receptor in the lamprey. Proc. Natl Acad. Sci. USA 107, 14304–14308 (2010)

    Article  ADS  CAS  Google Scholar 

  9. Das, S. et al. Organization of lamprey variable lymphocyte receptor C locus and repertoire development. Proc. Natl Acad. Sci. USA 110, 6043–6048 (2013)

    Article  ADS  CAS  Google Scholar 

  10. Vantourout, P. & Hayday, A. Six-of-the-best: unique contributions of gammadelta T cells to immunology. Nature Rev. Immunol. 13, 88–100 (2013)

    Article  CAS  Google Scholar 

  11. Alder, M. N. et al. Antibody responses of variable lymphocyte receptors in the lamprey. Nature Immunol. 9, 319–327 (2008)

    Article  CAS  Google Scholar 

  12. Herrin, B. R. et al. Structure and specificity of lamprey monoclonal antibodies. Proc. Natl Acad. Sci. USA 105, 2040–2045 (2008)

    Article  ADS  CAS  Google Scholar 

  13. Melichar, H. J. et al. Regulation of γδ versus αβ T lymphocyte differentiation by the transcription factor SOX13. Science 315, 230–233 (2007)

    Article  ADS  CAS  Google Scholar 

  14. Rothenberg, E. V., Moore, J. E. & Yui, M. A. Launching the T-cell-lineage developmental programme. Nature Rev. Immunol. 8, 9–21 (2008)

    Article  CAS  Google Scholar 

  15. Nakajima, S., Roswit, W. T., Look, D. C. & Holtzman, M. J. A hierarchy for integrin expression and adhesiveness among T cell subsets that is linked to TCR gene usage and emphasizes V delta 1+ gamma delta T cell adherence and tissue retention. J. Immunol. 155, 1117–1131 (1995)

    CAS  PubMed  Google Scholar 

  16. Wesch, D. et al. Direct costimulatory effect of TLR3 ligand poly(I:C) on human γδ T lymphocytes. J. Immunol. 176, 1348–1354 (2006)

    Article  CAS  Google Scholar 

  17. Wilson, K. C., Center, D. M. & Cruikshank, W. W. The effect of interleukin-16 and its precursor on T lymphocyte activation and growth. Growth Factors 22, 97–104 (2004)

    Article  CAS  Google Scholar 

  18. Wesch, D., Peters, C., Oberg, H. H., Pietschmann, K. & Kabelitz, D. Modulation of gammadelta T cell responses by TLR ligands. Cell. Mol. Life Sci. 68, 2357–2370 (2011)

    Article  CAS  Google Scholar 

  19. Bajoghli, B. et al. A thymus candidate in lampreys. Nature 470, 90–94 (2011)

    Article  ADS  CAS  Google Scholar 

  20. Ariotti, S. et al. Tissue-resident memory CD8+ T cells continuously patrol skin epithelia to quickly recognize local antigen. Proc. Natl Acad. Sci. USA 109, 19739–19744 (2012)

    Article  ADS  CAS  Google Scholar 

  21. Smith, J. J. et al. Sequencing of the sea lamprey (Petromyzon marinus) genome provides insights into vertebrate evolution. Nature Genet. 45, 415–421 (2013)

    Article  CAS  Google Scholar 

Download references

Acknowledgements

We thank C. L. Turnbough Jr for providing B. anthracis exosporium, H. Yi for help with electron microscopy, S. A. Durham and R. E. Karaffa II for help with cell sorting, S. Holland for help with gene orthology analysis, Q. Han for help with cloning, and B. R. Herrin, M. Kasahara and Y. Sutoh for suggestions and discussion. M.H., P.G., N.M., S.D. and M.D.C. are supported by National Institutes of Health grants (R01AI072435 and R01GM100151) and the Georgia Research Alliance; M.S. and T.B. are supported by the Max Planck Society.

Author information

Authors and Affiliations

Authors

Contributions

M.H., P.G., N.M., M.S., S.D., T.B. and M.D.C. designed the research, analysed data and wrote the paper; M.H., P.G., N.M., M.S., S.D. and T.B. carried out the research.

Corresponding author

Correspondence to Max D. Cooper.

Ethics declarations

Competing interests

The authors declare no competing financial interests.

Supplementary information

Supplementary Information

This file contains Supplementary Figures 1-6 and Supplementary Tables 1-2. (PDF 1827 kb)

PowerPoint slides

Rights and permissions

Reprints and permissions

About this article

Cite this article

Hirano, M., Guo, P., McCurley, N. et al. Evolutionary implications of a third lymphocyte lineage in lampreys. Nature 501, 435–438 (2013). https://doi.org/10.1038/nature12467

Download citation

  • Received:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1038/nature12467

This article is cited by

Comments

By submitting a comment you agree to abide by our Terms and Community Guidelines. If you find something abusive or that does not comply with our terms or guidelines please flag it as inappropriate.

Search

Quick links

Nature Briefing

Sign up for the Nature Briefing newsletter — what matters in science, free to your inbox daily.

Get the most important science stories of the day, free in your inbox. Sign up for Nature Briefing