Skip to main content

Thank you for visiting nature.com. You are using a browser version with limited support for CSS. To obtain the best experience, we recommend you use a more up to date browser (or turn off compatibility mode in Internet Explorer). In the meantime, to ensure continued support, we are displaying the site without styles and JavaScript.

  • Letter
  • Published:

Structure of the haptoglobin–haemoglobin complex

Abstract

Red cell haemoglobin is the fundamental oxygen-transporting molecule in blood, but also a potentially tissue-damaging compound owing to its highly reactive haem groups. During intravascular haemolysis, such as in malaria and haemoglobinopathies1, haemoglobin is released into the plasma, where it is captured by the protective acute-phase protein haptoglobin. This leads to formation of the haptoglobin–haemoglobin complex, which represents a virtually irreversible non-covalent protein–protein interaction2. Here we present the crystal structure of the dimeric porcine haptoglobin–haemoglobin complex determined at 2.9 Å resolution. This structure reveals that haptoglobin molecules dimerize through an unexpected β-strand swap between two complement control protein (CCP) domains, defining a new fusion CCP domain structure. The haptoglobin serine protease domain forms extensive interactions with both the α- and β-subunits of haemoglobin, explaining the tight binding between haptoglobin and haemoglobin. The haemoglobin-interacting region in the αβ dimer is highly overlapping with the interface between the two αβ dimers that constitute the native haemoglobin tetramer. Several haemoglobin residues prone to oxidative modification after exposure to haem-induced reactive oxygen species are buried in the haptoglobin–haemoglobin interface, thus showing a direct protective role of haptoglobin. The haptoglobin loop previously shown to be essential for binding of haptoglobin–haemoglobin to the macrophage scavenger receptor CD163 (ref. 3) protrudes from the surface of the distal end of the complex, adjacent to the associated haemoglobin α-subunit. Small-angle X-ray scattering measurements of human haptoglobin–haemoglobin bound to the ligand-binding fragment of CD163 confirm receptor binding in this area, and show that the rigid dimeric complex can bind two receptors. Such receptor cross-linkage may facilitate scavenging and explain the increased functional affinity of multimeric haptoglobin–haemoglobin for CD163 (ref. 4).

This is a preview of subscription content, access via your institution

Access options

Buy this article

Prices may be subject to local taxes which are calculated during checkout

Figure 1: Crystal structure of porcine Hp–Hb.
Figure 2: The Hp-bound Hb dimer is in its oxy-state.
Figure 3: The Hb contact area overlaps with the Hb dimer contact area in Hb tetramers.
Figure 4: Hb residues prone to oxidative modifications and SAXS.

Similar content being viewed by others

Accession codes

Primary accessions

Protein Data Bank

Data deposits

Atomic structure factors and coordinates have been deposited at the Protein Data Bank under accession number 4F4O.

References

  1. Bunn, H. F., Forget, B. G. & Ranney, H. M. Hemoglobinopathies 308 ( Saunders, W. B. Company, 1977)

    Google Scholar 

  2. Nagel, R. L. & Gibson, Q. H. The binding of hemoglobin to haptoglobin and its relation to subunit dissociation of hemoglobin. J. Biol. Chem. 246, 69–73 (1971)

    CAS  PubMed  Google Scholar 

  3. Nielsen, M. J. et al. A unique loop extension in the serine protease domain of haptoglobin is essential for CD163 recognition of the haptoglobin–hemoglobin complex. J. Biol. Chem. 282, 1072–1079 (2007)

    Article  CAS  Google Scholar 

  4. Kristiansen, M. et al. Identification of the haemoglobin scavenger receptor. Nature 409, 198–201 (2001)

    Article  CAS  ADS  Google Scholar 

  5. Sadrzadeh, S. M., Graf, E., Panter, S. S., Hallaway, P. E. & Eaton, J. W. Hemoglobin. A biologic fenton reagent. J. Biol. Chem. 259, 14354–14356 (1984)

    CAS  PubMed  Google Scholar 

  6. Shim, B. S., Lee, T. H. & Kang, Y. S. Immunological and biochemical investigations of human serum haptoglobin: composition of haptoglobin–haemoglobin intermediate, haemoglobin-binding sites and presence of additional alleles for β-chain. Nature 207, 1264–1267 (1965)

    Article  CAS  ADS  Google Scholar 

  7. Lim, S. K. et al. Increased susceptibility in Hp knockout mice during acute hemolysis. Blood 92, 1870–1877 (1998)

    CAS  PubMed  Google Scholar 

  8. Buehler, P. W. et al. Haptoglobin preserves the CD163 hemoglobin scavenger pathway by shielding hemoglobin from peroxidative modification. Blood 113, 2578–2586 (2009)

    Article  CAS  Google Scholar 

  9. Fagoonee, S. et al. Plasma protein haptoglobin modulates renal iron loading. Am. J. Pathol. 166, 973–983 (2005)

    Article  CAS  Google Scholar 

  10. Gaboriaud, C., Rossi, V., Bally, I., Arlaud, G. J. & Fontecilla-Camps, J. C. Crystal structure of the catalytic domain of human complement C1s: a serine protease with a handle. EMBO J. 19, 1755–1765 (2000)

    Article  CAS  Google Scholar 

  11. Budayova-Spano, M. et al. The crystal structure of the zymogen catalytic domain of complement protease C1r reveals that a disruptive mechanical stress is required to trigger activation of the C1 complex. EMBO J. 21, 231–239 (2002)

    Article  CAS  Google Scholar 

  12. Perutz, M. F. et al. Structure of haemoglobin: a three-dimensional Fourier synthesis at 5.5-Å resolution, obtained by X-ray analysis. Nature 185, 416–422 (1960)

    Article  CAS  ADS  Google Scholar 

  13. Wejman, J. C., Hovsepian, D., Wall, J. S., Hainfeld, J. F. & Greer, J. Structure of haptoglobin and the haptoglobin–hemoglobin complex by electron microscopy. J. Mol. Biol. 174, 319–341 (1984)

    Article  CAS  Google Scholar 

  14. Perona, J. J. & Craik, C. S. Evolutionary divergence of substrate specificity within the chymotrypsin-like serine protease fold. J. Biol. Chem. 272, 29987–29990 (1997)

    Article  CAS  Google Scholar 

  15. Smulevich, G., Possenti, M., D’Avino, R., di Prisco, G. & Coletta, M. Spectroscopic studies of the heme active site of hemoglobin from Chelidonichthys kumu. J. Raman Spectrosc. 29, 57–65 (1998)

    Article  CAS  ADS  Google Scholar 

  16. Park, S.-Y., Yokoyama, T., Shibayama, N., Shiro, Y. & Tame, J. R. H. 1.25 Å resolution crystal structures of human haemoglobin in the oxy, deoxy and carbonmonoxy forms. J. Mol. Biol. 360, 690–701 (2006)

    Article  CAS  Google Scholar 

  17. Kardos, J. et al. Revisiting the mechanism of the autoactivation of the complement protease C1r in the C1 complex: structure of the active catalytic region of C1r. Mol. Immunol. 45, 1752–1760 (2008)

    Article  CAS  Google Scholar 

  18. Dickerson, R. E. & Geis, I. Hemoglobin: Structure, Function, Evolution and Pathology (The Benjamin/Cummings Publishing Company, 1983)

    Google Scholar 

  19. Nagel, R. L., Whittenberg, J. B. & Ranney, H. M. Oxygen Equilibria of the hemoglobin–haptoglobin complex. Biochim. Biophys. Acta 100, 286–289 (1965)

    Article  CAS  Google Scholar 

  20. Venkatesh, B., Miyazaki, G., Imai, K., Morimoto, H. & Hori, H. Oxygen equilibrium and EPR studies on α1β1 hemoglobin dimer. J. Biochem. 136, 595–600 (2004)

    Article  CAS  Google Scholar 

  21. Ip, S. H., Johnson, M. L. & Ackers, G. K. Kinetics of deoxyhemoglobin subunit dissociation determined by haptoglobin binding: estimation of the equilibrium constant from forward and reverse rates. Biochemistry 15, 654–660 (1976)

    Article  CAS  Google Scholar 

  22. Azarov, I. et al. Rate of nitric oxide scavenging by hemoglobin bound to haptoglobin. Nitric Oxide 18, 296–302 (2008)

    Article  CAS  Google Scholar 

  23. Miller, Y. I., Altamentova, S. M. & Shaklai, N. Oxidation of low-density lipoprotein by hemoglobin stems from a heme-initiated globin radical: antioxidant role of haptoglobin. Biochemistry 36, 12189–12198 (1997)

    Article  CAS  Google Scholar 

  24. Pimenova, T. et al. Quantitative mass spectrometry defines an oxidative hotspot in hemoglobin that is specifically protected by haptoglobin. J. Proteome Res. 9, 4061–4070 (2010)

    Article  CAS  Google Scholar 

  25. Jia, Y., Buehler, P. W., Boykins, R. A., Venable, R. M. & Alayash, A. I. Structural basis of peroxide-mediated changes in human hemoglobin: a novel oxidative pathway. J. Biol. Chem. 282, 4894–4907 (2007)

    Article  CAS  Google Scholar 

  26. Smithies, O. & Walker, N. F. Notation for serum-protein groups and the genes controlling their inheritance. Nature 178, 694–695 (1956)

    Article  CAS  ADS  Google Scholar 

  27. Maeda, N., Yang, F., Barnett, D. R., Bowman, B. H. & Smithies, O. Duplication within the haptoglobin Hp2 gene. Nature 309, 131–135 (1984)

    Article  CAS  ADS  Google Scholar 

  28. Vanhollebeke, B. et al. A haptoglobin–hemoglobin receptor conveys innate immunity to Trypanosoma brucei in humans. Science 320, 677–681 (2008)

    Article  CAS  ADS  Google Scholar 

  29. Nielsen, M. J. et al. Haptoglobin-related protein is a high-affinity hemoglobin-binding plasma protein. Blood 108, 2846–2849 (2006)

    Article  CAS  Google Scholar 

  30. Kabsch, W. Automatic processing of rotation diffraction data from crystals of initially unknown symmetry and cell constants. J. Appl. Crystallogr. 26, 795–800 (1993)

    Article  CAS  Google Scholar 

  31. McCoy, A. J. et al. Phaser crystallographic software. J. Appl. Crystallogr. 40, 658–674 (2007)

    Article  CAS  Google Scholar 

  32. Adams, P. D. et al. PHENIX: a comprehensive Python-based system for macromolecular structure solution. Acta Crystallogr. D 66, 213–221 (2010)

    Article  CAS  Google Scholar 

  33. Jones, T. A., Zou, J. Y., Cowan, S. W. & Kjeldgaard, M. Improved methods for building protein models in electron density maps and the location of errors in these models. Acta Crystallogr. A 47, 110–119 (1991)

    Article  Google Scholar 

  34. Krissinel, E. & Henrick, K. Inference of macromolecular assemblies from crystalline state. J. Mol. Biol. 372, 774–797 (2007)

    Article  CAS  Google Scholar 

  35. Laskowski, R., MacArthur, M., Moss, D. & Thornton, J. Procheck – a program to check the stereochemical quality of protein structures. J. Appl. Crystallogr. 26, 283–291 (1993)

    Article  CAS  Google Scholar 

  36. The. PyMOL Molecular Graphics System v. 1.3r1 (Schrödinger, LLC, 2010)

  37. Bond, C. S. & Schuettelkopf, A. W. ALINE: a WYSIWYG protein-sequence alignment editor for publication-quality alignments. Acta Crystallogr. D 65, 510–512 (2009)

    Article  CAS  Google Scholar 

  38. Pedersen, J. A flux- and background-optimized version of the NanoSTAR small-angle X-ray scattering camera for solution scattering. J. Appl. Cryst. 37, 369–380 (2004)

    Article  CAS  Google Scholar 

  39. Madsen, M. et al. Molecular characterization of the haptoglobin·hemoglobin receptor CD163. Ligand binding properties of the scavenger receptor cysteine-rich domain region. J. Biol. Chem. 279, 51561–51567 (2004)

    Article  CAS  Google Scholar 

  40. Oliveira, C. L. P. et al. A SAXS study of glucagon fibrillation. J. Mol. Biol. 387, 147–161 (2009)

    Article  CAS  Google Scholar 

  41. Pedersen, J. S., Hansen, S. & Bauer, R. The aggregation behavior of zinc-free insulin studied by small-angle neutron scattering. Eur. Biophys. J. 22, 379–389 (1994)

    Article  CAS  Google Scholar 

  42. Glatter, O. New method for evaluation of small-angle scattering data. J. Appl. Crystallogr. 10, 415–421 (1977)

    Article  Google Scholar 

  43. Svergun, D. I. Restoring low resolution structure of biological macromolecules from solution scattering using simulated annealing. Biophys. J. 76, 2879–2886 (1999)

    Article  CAS  ADS  Google Scholar 

  44. Svergun, D. I., Petoukhov, M. V. & Koch, M. H. Determination of domain structure of proteins from X-ray solution scattering. Biophys. J. 80, 2946–2953 (2001)

    Article  CAS  Google Scholar 

  45. Svergun, D., Barberato, C. & Koch, M. CRYSOL — A program to evaluate x-ray solution scattering of biological macromolecules from atomic coordinates. J. Appl. Crystallogr. 28, 768–773 (1995)

    Article  CAS  Google Scholar 

  46. Petoukhov, M. V. & Svergun, D. I. Global rigid body modeling of macromolecular complexes against small-angle scattering data. Biophys. J. 89, 1237–1250 (2005)

    Article  CAS  Google Scholar 

  47. Volkov, V. & Svergun, D. Uniqueness of ab initio shape determination in small-angle scattering. J. Appl. Crystallogr. 36, 860–864 (2003)

    Article  CAS  Google Scholar 

Download references

Acknowledgements

We are grateful to G. Ratz for technical assistance, R. Kidmose, N. S. Laursen and the staff at the Swiss Light Source beamlines for help with data collection. We thank G. V. Jensen for performing SAXS measurements and R. E. Weber for scientific discussion. The research was supported by The Lundbeck Foundation, The Novo Nordisk Foundation, The Research Council of Norway, The European Research Council and The Danish Council for Independent Research.

Author information

Authors and Affiliations

Authors

Contributions

C.B.F.A.: purification, crystallization, data collection, structure determination and analysis, manuscript preparation and study design. M.T.-J.: purification, crystallization, data collection and structure determination. M.J.N.: cloning, expression and purification. C.L.P.d.O.: SAXS measurements and analysis. H.-P.H.: ultraviolet–visible spectroscopy and analysis. N.H.A.: Raman spectroscopy and analysis. J.S.P.: SAXS measurements and analysis. G.R.A.: study design. S.K.M.: manuscript preparation and study design.

Corresponding authors

Correspondence to Christian Brix Folsted Andersen or Søren Kragh Moestrup.

Ethics declarations

Competing interests

The authors declare no competing financial interests.

Supplementary information

Supplementary Information

This file contains Supplementary Table 1, Supplementary Figures 1-13 and additional references. (PDF 1629 kb)

PowerPoint slides

Rights and permissions

Reprints and permissions

About this article

Cite this article

Andersen, C., Torvund-Jensen, M., Nielsen, M. et al. Structure of the haptoglobin–haemoglobin complex. Nature 489, 456–459 (2012). https://doi.org/10.1038/nature11369

Download citation

  • Received:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1038/nature11369

This article is cited by

Comments

By submitting a comment you agree to abide by our Terms and Community Guidelines. If you find something abusive or that does not comply with our terms or guidelines please flag it as inappropriate.

Search

Quick links

Nature Briefing

Sign up for the Nature Briefing newsletter — what matters in science, free to your inbox daily.

Get the most important science stories of the day, free in your inbox. Sign up for Nature Briefing