Abstract
Tuberculosis (TB) is more prevalent in the world today than at any other time in human history. Mycobacterium tuberculosis, the pathogen responsible for TB, uses diverse strategies to survive in a variety of host lesions and to evade immune surveillance. A key question is how robust are our approaches to discovering new TB drugs, and what measures could be taken to reduce the long and protracted clinical development of new drugs. The emergence of multi-drug-resistant strains of M. tuberculosis makes the discovery of new molecular scaffolds a priority, and the current situation even necessitates the re-engineering and repositioning of some old drug families to achieve effective control. Whatever the strategy used, success will depend largely on our proper understanding of the complex interactions between the pathogen and its human host. In this review, we discuss innovations in TB drug discovery and evolving strategies to bring newer agents more quickly to patients.
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References
Dye, C. & Williams, B. G. The population dynamics and control of tuberculosis. Science 328, 856–861 (2010)
Riley, R. L. Aerial dissemination of pulmonary tuberculosis. Am. Rev. Tuberc. 76, 931–941 (1957)
Barry, C. E., III et al. The spectrum of latent tuberculosis: rethinking the biology and intervention strategies. Nature Rev. Microbiol. 7, 845–855 (2009)
World Health Organization. Multidrug and Extensive Drug Resistant Tuberculosis: 2010 Global Report on Surveillance and Response (World health Organization, 2010)
Gandhi, N. R. et al. Multidrug-resistant and extensively drug-resistant tuberculosis: a threat to global control of tuberculosis. Lancet 375, 1830–1843 (2010)
Mitnick, C. et al. Community-based therapy for multidrug-resistant tuberculosis in Lima, Peru. N. Engl. J. Med. 348, 119–128 (2003)
Ma, Z., Lienhardt, C., McIlleron, H., Nunn, A. J. & Wang, X. Global tuberculosis drug development pipeline: the need and the reality. Lancet 375, 2100–2109 (2010)
World Health Organization. The Global Plan to Stop TB 2011–2015: Transforming the Fight Towards Elimination of Tuberculosis (World Health Organization, 2010)
Niemi, M., Backman, J. T., Fromm, M. F., Neuvonen, P. J. & Kivisto, K. T. Pharmacokinetic interactions with rifampicin: clinical relevance. Clin. Pharmacokinet. 42, 819–850 (2003)
L’homme, R. F. et al. Clinical experience with the combined use of lopinavir/ritonavir and rifampicin. AIDS 23, 863–865 (2009)
Khachi, H., O’Connell, R., Ladenheim, D. & Orkin, C. Pharmacokinetic interactions between rifabutin and lopinavir/ritonavir in HIV-infected patients with mycobacterial co-infection. J. Antimicrob. Chemother. 64, 871–873 (2009)
Goodwin, B., Hodgson, E. & Liddle, C. The orphan human pregnane X receptor mediates the transcriptional activation of CYP3A4 by rifampicin through a distal enhancer module. Mol. Pharmacol. 56, 1329–1339 (1999)
Campbell, E. A. et al. Structural mechanism for rifampicin inhibition of bacterial RNA polymerase. Cell 104, 901–912 (2001)
Burman, W. J., Gallicano, K. & Peloquin, C. Therapeutic implications of drug interactions in the treatment of human immunodeficiency virus-related tuberculosis. Clin. Infect. Dis. 28, 419–429 (1999)
Touré, N. O. et al. Tuberculosis and diabetes [in French with English abstract]. Rev. Mal. Respir. 24, 869–875 (2007)
Dooley, K. E. & Chaisson, R. E. Tuberculosis and diabetes mellitus: convergence of two epidemics. Lancet Infect. Dis. 9, 737–746 (2009)
Ruslami, R. et al. Pharmacokinetics of antituberculosis drugs in pulmonary tuberculosis patients with type 2 diabetes. Antimicrob. Agents Chemother. 54, 1068–1074 (2010)
Payne, D. J., Gwynn, M. N., Holmes, D. J. & Pompliano, D. L. Drugs for bad bugs: confronting the challenges of antibacterial discovery. Nature Rev. Drug Discov. 6, 29–40 (2007)An excellent review on what is ailing antibacterial research and remedial measures to be taken.
Macielag, M. Chemical Properties of Antibacterial Drugs (45th Interscience Conference for Antimicrobial Agents and Chemotherapy (ICAAC), December 16–19, 2005)
Cole, S. T. et al. Deciphering the biology of Mycobacterium tuberculosis from the complete genome sequence. Nature 393, 537–544 (1998)A landmark paper describing the genomic sequence of M. tuberculosis and thereby identifying several new drug targets.
Working Group on New TB Drugs The global TB drug pipeline. 〈http://www.newtbdrugs.org/project.php?id=183〉 (2010)
Pethe, K. et al. A chemical genetic screen in Mycobacterium tuberculosis identifies carbon-source-dependent growth inhibitors devoid of in vivo efficacy. Nature Commun. 1, 57 (2010)
Andries, K. et al. A diarylquinoline drug active on the ATP synthase of Mycobacterium tuberculosis . Science 307, 223–227 (2005)Describes the discovery of the novel drug candidate TMC207.
Koul, A. et al. Diarylquinolines target subunit c of mycobacterial ATP synthase. Nature Chem. Biol. 3, 323–324 (2007)
Makarov, V. et al. Benzothiazinones kill Mycobacterium tuberculosis by blocking arabinan synthesis. Science 324, 801–804 (2009)
Bald, D. & Koul, A. Respiratory ATP synthesis: the new generation of mycobacterial drug targets? FEMS Microbiol. Lett. 308, 1–7 (2010)
Koul, A. et al. Diarylquinolines are bactericidal for dormant mycobacteria as a result of disturbed ATP homeostasis. J. Biol. Chem. 283, 25273–25280 (2008)
Rao, S. P., Alonso, S., Rand, L., Dick, T. & Pethe, K. The protonmotive force is required for maintaining ATP homeostasis and viability of hypoxic, nonreplicating Mycobacterium tuberculosis . Proc. Natl Acad. Sci. USA 105, 11945–11950 (2008)Important research demonstrating the effect of inhibition of the respiratory chain for killing dormant TB bacilli.
Boshoff, H. I. & Barry, C. E., III Tuberculosis—metabolism and respiration in the absence of growth. Nature Rev. Microbiol. 3, 70–80 (2005)This review provides an excellent understanding of how tuberculosis adapts and survives during long-term persistence.
Fischbach, M. A. & Walsh, C. T. Antibiotics for emerging pathogens. Science 325, 1089–1093 (2009)
Williams, K. N. et al. Promising antituberculosis activity of the oxazolidinone PNU-100480 relative to that of linezolid in a murine model. Antimicrob. Agents Chemother. 53, 1314–1319 (2009)
Fortún, J. et al. Linezolid for the treatment of multidrug-resistant tuberculosis. J. Antimicrob. Chemother. 56, 180–185 (2005)
Conte, J. E., Jr, Golden, J. A., Kipps, J. & Zurlinden, E. Intrapulmonary pharmacokinetics of linezolid. Antimicrob. Agents Chemother. 46, 1475–1480 (2002)
Singh, R. et al. PA-824 kills nonreplicating Mycobacterium tuberculosis by intracellular NO release. Science 322, 1392–1395 (2008)
Manjunatha, U., Boshoff, H. I. & Barry, C. E. The mechanism of action of PA-824: novel insights from transcriptional profiling. Commun. Integr. Biol. 2, 215–218 (2009)
Chambers, H. F. et al. Can penicillins and other beta-lactam antibiotics be used to treat tuberculosis? Antimicrob. Agents Chemother. 39, 2620–2624 (1995)
Hugonnet, J. E., Tremblay, L. W., Boshoff, H. I., Barry, C. E., III & Blanchard, J. S. Meropenem-clavulanate is effective against extensively drug-resistant Mycobacterium tuberculosis . Science 323, 1215–1218 (2009)Renewed interest in β-lactams and their combination with broad-spectrum lactamase inhibitors for TB treatment.
Drawz, S. M. & Bonomo, R. A. Three decades of β-lactamase inhibitors. Clin. Microbiol. Rev. 23, 160–201 (2010)
Agrawal, D., Udwadia, Z. F., Rodriguez, C. & Mehta, A. Increasing incidence of fluoroquinolone-resistant Mycobacterium tuberculosis in Mumbai, India. Int. J. Tuberc. Lung Dis. 13, 79–83 (2009)
O’Shea, R. & Moser, H. E. Physicochemical properties of antibacterial compounds: implications for drug discovery. J. Med. Chem. 51, 2871–2878 (2008)A thorough study of the physicochemical properties of antibacterial compounds and accompanying chemical space.
Ritchie, T. J., Luscombe, C. N. & Macdonald, S. J. Analysis of the calculated physicochemical properties of respiratory drugs: can we design for inhaled drugs yet? J. Chem. Inf. Model. 49, 1025–1032 (2009)
Hett, E. C. & Rubin, E. J. Bacterial growth and cell division: a mycobacterial perspective. Microbiol. Mol. Biol. Rev. 72, 126–56 (2008)
Koul, A., Herget, T., Klebl, B. & Ullrich, A. Interplay between mycobacteria and host signalling pathways. Nature Rev. Microbiol. 2, 189–202 (2004)
Székely, R. et al. A novel drug discovery concept for tuberculosis: inhibition of bacterial and host cell signalling. Immunol. Lett. 116, 225–231 (2008)
Miller, J. R. et al. A class of selective antibacterials derived from a protein kinase inhibitor pharmacophore. Proc. Natl Acad. Sci. USA 106, 1737–1742 (2009)
Walburger, A. et al. Protein kinase G from pathogenic mycobacteria promotes survival within macrophages. Science 304, 1800–1804 (2004)
Zhou, B. et al. Targeting mycobacterium protein tyrosine phosphatase B for antituberculosis agents. Proc. Natl Acad. Sci. USA 107, 4573–4578 (2010)
Kumar, D. et al. Genome-wide analysis of the host intracellular network that regulates survival of Mycobacterium tuberculosis . Cell 140, 731–743 (2010)
Keating, L. A. et al. The pyruvate requirement of some members of the Mycobacterium tuberculosis complex is due to an inactive pyruvate kinase: implications for in vivo growth. Mol. Microbiol. 56, 163–174 (2005)
Andries, K., Gevers, T. & Lounis, N. Bactericidal potencies of new regimens are not predictive for their sterilizing potencies in a murine model of tuberculosis. Antimicrob. Agents Chemother. 54, 4540–4544 (2010)
Dhar, N. & McKinney, J. D. Mycobacterium tuberculosis persistence mutants identified by screening in isoniazid-treated mice. Proc. Natl Acad. Sci. USA 107, 12275–12280 (2010)
Ibrahim, M., Truffot-Pernot, C., Andries, K., Jarlier, V. & Veziris, N. Sterilizing activity of R207910 (TMC207)-containing regimens in the murine model of tuberculosis. Am. J. Respir. Crit. Care Med. 180, 553–557 (2009)
Feldman, W. H., Karlson, A. G. & Hinshaw, H. C. Streptomycin in experimental tuberculosis: the effects in guinea pigs following infection in intravenous inoculation. Am. Rev. Tuberc. 56, 346–359 (1947)
Davis, J. M. & Ramakrishnan, L. The role of the granuloma in expansion and dissemination of early tuberculous infection. Cell 136, 37–49 (2009)
Russell, D. G., Barry, C. E., III & Flynn, J. L. Tuberculosis: what we don’t know can, and does, hurt us. Science 328, 852–856 (2010)
Donald, P. R. & Diacon, A. H. The early bactericidal activity of anti-tuberculosis drugs: a literature review. Tuberculosis (Edinb.) 88 (suppl. 1). S75–S83 (2008)
Rustomjee, R. et al. Early bactericidal activity and pharmacokinetics of the diarylquinoline TMC207 in treatment of pulmonary tuberculosis. Antimicrob. Agents Chemother. 52, 2831–2835 (2008)
Wallis, R. S. et al. Biomarkers for tuberculosis disease activity, cure, and relapse. Lancet Infect. Dis. 10, 68–69 (2010)
Mitchison, D. A. Assessment of new sterilizing drugs for treating pulmonary tuberculosis by culture at 2 months. Am. Rev. Respir. Dis. 147, 1062–1063 (1993)An interesting demonstration of using 2-months culture conversion as a surrogate marker in TB trials.
Wallis, R. S. et al. Biomarkers and diagnostics for tuberculosis: progress, needs, and translation into practice. Lancet 375, 1920–1937 (2010)An excellent review on the need for biomarkers and other tools for shortening TB trials.
Diacon, A. H. et al. The diarylquinoline TMC207 for multidrug-resistant tuberculosis. N. Engl. J. Med. 360, 2397–2405 (2009)
Rustomjee, R. et al. A Phase II study of the sterilising activities of ofloxacin, gatifloxacin and moxifloxacin in pulmonary tuberculosis. Int. J. Tuberc. Lung Dis. 12, 128–138 (2008)
Berry, M. P. et al. An interferon-inducible neutrophil-driven blood transcriptional signature in human tuberculosis. Nature 466, 973–977 (2010)
Spigelman, M., Woosley, R. & Gheuens, J. New initiative speeds tuberculosis drug development: novel drug regimens become possible in years, not decades. Int. J. Tuberc. Lung Dis. 14, 663–664 (2010)
Pieters, J. Mycobacterium tuberculosis and the macrophage: maintaining a balance. Cell Host Microbe 3, 399–407 (2008)
Dhar, N. & McKinney, J. D. Microbial phenotypic heterogeneity and antibiotic tolerance. Curr. Opin. Microbiol. 10, 30–38 (2007)
Beresford, B. & Sadoff, J. C. Update on research and development pipeline: tuberculosis vaccines. Clin. Infect. Dis. 50 (suppl. 3). S178–S183 (2010)
Shi, L. et al. Changes in energy metabolism of Mycobacterium tuberculosis in mouse lung and under in vitro conditions affecting aerobic respiration. Proc. Natl Acad. Sci. USA 102, 15629–15634 (2005)
Weinstein, E. A. et al. Inhibitors of type II NADH:menaquinone oxidoreductase represent a class of antitubercular drugs. Proc. Natl Acad. Sci. USA 102, 4548–4553 (2005)An interesting demonstration of targeting NADH dehydrogenase for identifying new TB drugs or re-purposing old drug classes.
MOE. v. 2009. 10 〈http://www.chemcomp.com〉 (Chemical Computing Group Inc Montreal, Canada) (2010)
SIMCA-P+12. 〈http://www.umetrics.com〉 (Umetrics AB, Umeå, Sweden) (2010)
Hirano, S., Ichikawa, S. & Matsuda, A. Structure–activity relationship of truncated analogs of caprazamycins as potential anti-tuberculosis agents. Bioorg. Med. Chem. 16, 5123–5133 (2008)
Hennessy, A. et. al. Substituted (Aza)-1 methyl -1H-Quinolin-2-ones as antibacterials. Patent W02010/046388A1. (2010)
Chao, M. C. & Rubin, E. J. Letting sleeping dos lie: does dormancy play a role in tuberculosis? Annu. Rev. Microbiol. 64, 293–311 (2010)
Acknowledgements
We thank our colleagues K. Simmen, N. Austin, V. Sinha, H. Van Vlijmen and M. Macleigh for critical reading and providing valuable scientific input for this manuscript. We would also like to thank B. Challis for reviewing this manuscript, S. Mostmans from the Business Intelligence Group for providing TB pipeline updates, and E. Huybrechts for her help with preparing the figures.
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A.K. wrote the synopsis, conceptualized different topics within the review, wrote and contributed to all sections of the review; coordinated and discussed the content with other co-authors. E.A. did the principal component analysis work on TB drugs, N.L. contributed to the section on animal models, J.G. did the chemistry part of the review including chemical structures and K.A. contributed to different sections of the review with a major focus on TB clinical development.
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The authors are employees of Johnson and Johnson and are currently involved in the development of new TB drug TMC207.
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Koul, A., Arnoult, E., Lounis, N. et al. The challenge of new drug discovery for tuberculosis. Nature 469, 483–490 (2011). https://doi.org/10.1038/nature09657
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DOI: https://doi.org/10.1038/nature09657
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