Skip to main content

Thank you for visiting nature.com. You are using a browser version with limited support for CSS. To obtain the best experience, we recommend you use a more up to date browser (or turn off compatibility mode in Internet Explorer). In the meantime, to ensure continued support, we are displaying the site without styles and JavaScript.

  • Letter
  • Published:

Processivity of the single-headed kinesin KIF1A through biased binding to tubulin

Abstract

Conventional isoforms of the motor protein kinesin behave functionally not as ‘single molecules’ but as ‘two molecules’ paired. This dimeric structure poses a barrier to solving its mechanism1,2,3,4. To overcome this problem, we used an unconventional kinesin KIF1A (refs 5, 6) as a model molecule. KIF1A moves processively as an independent monomer7,8, and can also work synergistically as a functional dimer9. Here we show, by measuring its movement with an optical trapping system10, that a single ATP hydrolysis triggers a single stepping movement of a single KIF1A monomer. The step size is distributed stochastically around multiples of 8 nm with a gaussian-like envelope and a standard deviation of 15 nm. On average, the step is directional to the microtubule's plus-end against a load force of up to 0.15 pN. As the source for this directional movement, we show that KIF1A moves to the microtubule's plus-end by 3 nm on average on binding to the microtubule, presumably by preferential binding to tubulin on the plus-end side. We propose a simple physical formulation to explain the movement of KIF1A.

This is a preview of subscription content, access via your institution

Access options

Buy this article

Prices may be subject to local taxes which are calculated during checkout

Figure 1: Movement of KIF1A beads.
Figure 2: Stepping movement of KIF1A beads.
Figure 3: Plus-end-directed movement after binding to the microtubule.

Similar content being viewed by others

References

  1. Hua, W., Chung, J. & Gelles, J. Distinguishing inchworm and hand-over-hand processive kinesin movement by neck rotation measurements. Science 295, 844–848 (2002)

    Article  ADS  CAS  Google Scholar 

  2. Kaseda, K., Higuchi, H. & Hirose, K. Coordination of kinesin's two heads studied with mutant heterodimers. Proc. Natl Acad. Sci. USA 99, 16058–16063 (2002)

    Article  ADS  CAS  Google Scholar 

  3. Rice, S. et al. A structural change in the kinesin motor protein that drives motility. Nature 402, 778–784 (1999)

    Article  ADS  CAS  Google Scholar 

  4. Gilbert, S. P., Moyer, M. L. & Johnson, K. A. Alternating site mechanism of the kinesin ATPase. Biochemistry 37, 792–799 (1998)

    Article  CAS  Google Scholar 

  5. Okada, Y., Yamazaki, H., Sekine Aizawa, Y. & Hirokawa, N. The neuron-specific kinesin superfamily protein KIF1A is a unique monomeric motor for anterograde axonal transport of synaptic vesicle precursors. Cell 81, 769–780 (1995)

    Article  CAS  Google Scholar 

  6. Hirokawa, N. Kinesin and dynein superfamily proteins and the mechanism of organelle transport. Science 279, 519–526 (1998)

    Article  ADS  CAS  Google Scholar 

  7. Okada, Y. & Hirokawa, N. Mechanism of the single-headed processivity: diffusional anchoring between the K-loop of kinesin and the C terminus of tubulin. Proc. Natl Acad. Sci. USA 97, 640–645 (2000)

    Article  ADS  CAS  Google Scholar 

  8. Okada, Y. & Hirokawa, N. A processive single-headed motor: Kinesin superfamily protein KIF1A. Science 283, 1152–1157 (1999)

    Article  ADS  CAS  Google Scholar 

  9. Tomishige, M., Klopfenstein, D. R. & Vale, R. D. Conversion of Unc104/KIF1A kinesin into a processive motor after dimerization. Science 297, 2263–2267 (2002)

    Article  ADS  CAS  Google Scholar 

  10. Nishiyama, M., Muto, E., Inoue, Y., Yanagida, T. & Higuchi, H. Substeps within the 8-nm step of the ATPase cycle of single kinesin molecules. Nature Cell Biol. 3, 425–428 (2001)

    Article  CAS  Google Scholar 

  11. Nishiyama, M., Higuchi, H. & Yanagida, T. Chemomechanical coupling of the forward and backward steps of single kinesin molecules. Nature Cell Biol. 4, 790–797 (2002)

    Article  CAS  Google Scholar 

  12. Kikkawa, M. et al. Switch-based mechanism of kinesin motors. Nature 411, 439–445 (2001)

    Article  ADS  CAS  Google Scholar 

  13. Block, S. M., Goldstein, L. S. & Schnapp, B. J. Bead movement by single kinesin molecules studied with optical tweezers. Nature 348, 348–352 (1990)

    Article  ADS  CAS  Google Scholar 

  14. Endow, S. A. & Higuchi, H. A mutant of the motor protein kinesin that moves in both directions on microtubules. Nature 406, 913–916 (2000)

    Article  ADS  CAS  Google Scholar 

  15. Svoboda, K., Schmidt, C. F., Schnapp, B. J. & Block, S. M. Direct observation of kinesin stepping by optical trapping interferometry. Nature 365, 721–727 (1993)

    Article  ADS  CAS  Google Scholar 

  16. Kikkawa, M., Okada, Y. & Hirokawa, N. 15 Å resolution model of the monomeric kinesin motor, KIF1A. Cell 100, 241–252 (2000)

    Article  CAS  Google Scholar 

  17. Veigel, C. et al. The motor protein myosin-I produces its working stroke in two steps. Nature 398, 530–533 (1999)

    Article  ADS  CAS  Google Scholar 

  18. Hackney, D. D. Pathway of ADP-stimulated ADP release and dissociation of tethered kinesin from microtubules. Implications for the extent of processivity. Biochemistry 41, 4437–4446 (2002)

    Article  CAS  Google Scholar 

  19. Astumian, R. D. Thermodynamics and kinetics of a Brownian motor. Science 276, 917–922 (1997)

    Article  CAS  Google Scholar 

  20. Julicher, F., Ajdari, A. & Prost, J. Modeling molecular motors. Rev. Mod. Phys. 69, 1269–1281 (1997)

    Article  ADS  CAS  Google Scholar 

  21. Farrell, C. M., Mackey, A. T., Klumpp, L. M. & Gilbert, S. P. The role of ATP hydrolysis for kinesin processivity. J. Biol. Chem. 277, 17079–17087 (2002)

    Article  CAS  Google Scholar 

  22. Berliner, E., Young, E. C., Anderson, K., Mahtani, H. K. & Gelles, J. Failure of a single-headed kinesin to track parallel to microtubule protofilaments. Nature 373, 718–721 (1995)

    Article  ADS  CAS  Google Scholar 

  23. Inoue, Y. et al. Movements of truncated kinesin fragments with a short or an artificial flexible neck. Proc. Natl Acad. Sci. USA 94, 7275–7280 (1997)

    Article  ADS  CAS  Google Scholar 

  24. Howard, J. & Hyman, A. A. Preparation of marked microtubules for the assay of the polarity of microtubule-based motors by fluorescence microscopy. Methods Cell Biol. 39, 105–113 (1993)

    Article  CAS  Google Scholar 

  25. deCastro, M. J., Fondecave, R. M., Clarke, L. A., Schmidt, C. F. & Stewart, R. J. Working strokes by single molecules of the kinesin-related microtubule motor ncd. Nature Cell Biol. 2, 724–729 (2000)

    Article  CAS  Google Scholar 

Download references

Acknowledgements

We thank T. J. Mitchison for the gift of GMPCPP; H. Fukuda, H. Sato and M. Sugaya for technical and secretarial assistance; and J. Howard, M. Kikkawa and our colleagues for discussion. This work was supported by a Center of Excellence Grant-in-Aid (N.H.) and a Grant-in-Aid (H.H.) from the Ministry of Education, Culture, Sports, Science and Technology of Japan.

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Nobutaka Hirokawa.

Ethics declarations

Competing interests

The authors declare that they have no competing financial interests.

Supplementary information

Rights and permissions

Reprints and permissions

About this article

Cite this article

Okada, Y., Higuchi, H. & Hirokawa, N. Processivity of the single-headed kinesin KIF1A through biased binding to tubulin. Nature 424, 574–577 (2003). https://doi.org/10.1038/nature01804

Download citation

  • Received:

  • Accepted:

  • Issue Date:

  • DOI: https://doi.org/10.1038/nature01804

This article is cited by

Comments

By submitting a comment you agree to abide by our Terms and Community Guidelines. If you find something abusive or that does not comply with our terms or guidelines please flag it as inappropriate.

Search

Quick links

Nature Briefing

Sign up for the Nature Briefing newsletter — what matters in science, free to your inbox daily.

Get the most important science stories of the day, free in your inbox. Sign up for Nature Briefing