Figure 3: A clear transition from low to high SNP rate between strains 129 and B6 in a 1-Mb region at the telomeric end of chromosome 5. | Nature

Figure 3: A clear transition from low to high SNP rate between strains 129 and B6 in a 1-Mb region at the telomeric end of chromosome 5.

From: The mosaic structure of variation in the laboratory mouse genome

Figure 3

a, Finished sequence NT_027601 when aligned against the B6 whole genome assembly demonstrates a low-SNP-rate region (the first 161 kb) followed by a high-SNP-rate region (the last 101 kb) and an abrupt transition between SNP rate regions. b, Whole genome shotgun reads from the same genomic region provide evidence of the same well-defined transition point. Bars correspond to 500-bp reads containing one or more SNPs (red), or no SNPs (blue) when compared with the B6 assembly.

Back to article page