Table 1 Host-specific oligotypes and their V6 tag sequences.

From: A single genus in the gut microbiome reflects host preference and specificity

Source Oligotype Representative V6 Tag Average % abundance Total no. of reads Average no. of reads per sample
Human AACCTCGGACCCGTCCCCTTAGGA AAATCTTGACATCCCTCTGACCGGGACTTAACCGTCCCCTTTCTTCGGAACAGAGGAGAC 0.0859 9,874 987
Human AGCCTCGTCTTCGGACCTCTAGGT AAGTCTTGACATCCCTCTGACCGGTCTTTAATCGGACCTTCTCTTCGGAGCAGAGGTGAC 0.0038 446 45
Human AGCCTGACTCCCGAGTCTTCAGGA AAGTCTTGACATCCCTCTGACGGACTCTTAACCGAGTCTTTCCTTCGGGACAGAGGAGAC 0.0088 1,019 47
Swine AGCGGCGGACCCGTCCCTCCCCGA AAGTCTTGACATCCGGATGACCGGGACTTAACCGTCCCTTCCCTTCGGGGCATCCGAGAC 0.0130 2,022 168
Swine AGCGGATCCTCCGGGACTCCCCGA AAGTCTTGACATCCGGATGACAGTCCTTTAACCGGGACTTCCCTTCGGGGCATCCGAGAC 0.0127 1,980 165
Swine AGCCTCGGGCCCGCCCCTTCAGGA AAGTCTTGACATCCCTCTGACCGGGGCTTAACCGCCCCTTTCCTTCGGGACAGAGGAGAC 0.0092 1,433 119
Swine AGCCTCGGGCCCGTCCCTTCAGGA AAGTCTTGACATCCCTCTGACCGGGGCTTAACCGTCCCTTTCCTTCGGGACAGAGGAGAC 0.0048 758 63
Swine AGCGGCGCCGCGCGGCCTCCCCGA AAGTCTTGACATCCGGATGACCGGCCGGTAACGCGGCCTTCCCTTCGGGGCATCCGAGAC 0.0029 452 38
Swine AGCCTTATCCCGGGATCTTCAGGA AAGTCTTGACATCCCTCTGACTGATCCGTAACGGGATCTTTCCTTCGGGACAGAGGAGAC 0.0015 239 20
Cow GGCCTCTTCCCCGGAACTTCAGGT AGGACTTGACATCCCTCTGACCGTTCCTTAACCGGAACTTTCCTTCGGGACAGAGGTGAC 0.0545 3,794 421
Deer AGCCGCGAACCGGTTCCTCTCGGA AAGTCTTGACATCCCGATGACCGGAACGTAACGGTTCCTTCTCTTCGGAGCATCGGAGAC 0.0232 1,492 186
Chicken AGCCTCTTCTCCGGAACTTCAGGA AAGTCTTGACATCCCTCTGACCGTTCTTTAACCGGAACTTTCCTTCGGGACAGAGGAGAC 0.0133 610 68
Chicken AGCCTCCGCCCCGGCGCTTCAGGA AAGTCTTGACATCCCTCTGACCGCGCCTTAACCGGCGCTTTCCTTCGGGACAGAGGAGAC 0.0031 142 16
  1. Average percent abundance column lists the average relative abundance of each oligotype among the source host. Total number of reads column shows the size of the oligotype.