Abstract
Thyroid iodide accumulation via the sodium/iodide symporter (NIS; SLC5A5) has been the basis for the longtime use of radio-iodide in the diagnosis and treatment of thyroid cancers. NIS is also expressed, but poorly functional, in some non-thyroid human cancers. In particular, it is much more strongly expressed in cholangiocarcinoma (CCA) and hepatocellular carcinoma (HCC) cell lines than in primary human hepatocytes (PHH). The transcription factors and signaling pathways that control NIS overexpression in these cancers is largely unknown. We identified two putative regulatory clusters of p53-responsive elements (p53REs) in the NIS core promoter, and investigated the regulation of NIS transcription by p53-family members in liver cancer cells. NIS promoter activity and endogenous NIS mRNA expression are stimulated by exogenously expressed p53-family members and significantly reduced by member-specific siRNAs. Chromatin immunoprecipitation analysis shows that the p53–REs clusters in the NIS promoter are differentially occupied by the p53-family members to regulate basal and DNA damage-induced NIS transcription. Doxorubicin strongly induces p53 and p73 binding to the NIS promoter, leading to an increased expression of endogenous NIS mRNA and protein in HCC and CCA cells, but not in PHH. Silencing NIS expression reduced doxorubicin-induced apoptosis in HCC cells, pointing to a possible role of a p53-family-dependent expression of NIS in apoptotic cell death. Altogether, these results indicate that the NIS gene is a direct target of the p53 family and suggests that the modulation of NIS by DNA-damaging agents is potentially exploitable to boost NIS upregulation in vivo.
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Main
The solute carrier family 5 member A5 SLC5A5, commonly referred to as the sodium/iodide symporter (NIS), is a trans-membrane glycoprotein that mediates active iodide uptake into thyroid follicular cells and thereby has a crucial role in the biosynthesis of thyroid hormones.1, 2 Expression of a functional NIS protein was also found in several other normal tissues, such as stomach, salivary glands and lactating mammary gland.3, 4, 5
NIS-mediated ability of thyroid cancer cells to accumulate iodide is exploited for diagnostic nuclear imaging and radioiodine therapy.6, 7 However, NIS expression in thyroid cancers decreases as the cancer cell differentiation decreases,5 rendering non-differentiated thyroid cancers refractory to radioiodine therapy. In the stomach NIS expression is generally suppressed, during carcinogenesis.8 A NIS expression was found in a number of other non-thyroid cancers, among which those of the breast and liver.5, 9, 10 In breast cancer cells, NIS expression was stimulated by retinoic acid (RA), estrogen and glucocorticoids, and it was induced through the Rac1/p38b mitogen-activated protein kinase (MAPK), cAMP and phosphoinositide-3 kinase (PI3K)-signaling pathways.11, 12, 13, 14 In liver cancers, NIS was expressed in all the cholangiocarcinoma (CCA) and in a small proportion of the hepatocellular carcinoma (HCC), studied.9 NIS expression was detected in the precancerous stages of liver cancer in a rat model of HCC, and further amplified along clonal tumor progression.9 In a majority of NIS-expressing non-thyroid cancers, NIS is largely retained intracellularly with a low cell surface density, and showed little or no iodide uptake activity.15, 16, 17 The role of NIS in carcinogenesis and the function of intracellular NIS in normal and neoplastic tissues have recently been clarified by discovering a role of NIS in cell migration and invasion without ion transport being involved.18
The transcriptional regulation of NIS expression is complex. It involves different regulatory regions and the activity of both thyroid-enriched and ubiquitous transcription factors.19, 20 An upstream enhancer (NUE), located in human cells between −9470 and −9046 relative to ATG, mediates NIS thyroid specific expression.19 The hNUE is strongly responsive to TSH stimulation and contains putative cis-elements for the Pax-8 and Nkx2.1 transcription factors, which are both required for thyroid development and differentiation.21 Pax-8 sites co-operate with an adjacent cAMP-responsive element to ensure full hNUE activity22, 23, 24 and mediate the transcriptional repression of hNIS expression by the PBF (pituitary tumor-transforming gene (PTTG)-binding factor) proto-oncogene.25 The hNIS core promoter region spans between −475 and −393 relative to ATG and contains a TATA-like motif and a GC-box. Binding of Sp1 and a ‘Sp1-like protein’ to the GC-box is required for a basal activity of NIS promoter.26 A RA-response element located at position −1375 relative to NIS start codon mediates the activation of NIS expression by tRA in human follicular thyroid carcinoma cells.27 NIS regulation by retinoids in breast cancer cells is effected through a downstream intronic enhancer, which binds RARα and RXR.28, 29, 30, 31, 32, 33 Moreover, the cardiac homeobox transcription factor Nkx2.5, which is induced upon tRA stimulation, binds two cis-acting elements in the hNIS promoter located at −446 and −154 relative to ATG.34
NIS upregulation in a large spectrum of cancers with different genetic backgrounds suggests the involvement of molecular factors common to these cancers, which remain, however, to be identified. We investigated the possible role of the p53 gene family in the transcriptional regulation of NIS expression in normal and neoplastic liver cells. In silico analyses revealed that the proximal regulatory region of human NIS gene contains numerous responsive elements to p53. Here, we show that NIS gene is a direct target of the p53-family proteins and that DNA damage triggers NIS gene activation through a differential binding of p53 and p53-related proteins to NIS proximal promoter.
Results
NIS is a transcriptional target of the p53-family members in liver cells
A previous study of NIS expression in human primary liver cancers revealed significant levels of NIS in all the tumor cholangiocytes and in a small proportion of the tumor hepatocytes studied, whereas all the tumor hepatocytes expressed NIS in the DEN (diethyl nitrosamine) rat model of HCC.9 The reasons for such differences in NIS expression are unknown. To identify cell models appropriate for NIS transcription studies, we investigated by real-time PCR the expression levels of NIS mRNA in well-characterized human HCC and CCA cell lines. Figure 1a shows the un-stimulated NIS mRNA levels in Hep3B, HepG2, HuH7 (human HCC) and CCSW1, CCLP1 (human CCA) cells. The Hep3B cell line is p53 null; the HepG2 and CCSW1 liver cancer cell lines have a wild-type p53 gene, while the HuH7 and CCLP1 cell lines carry p53 point mutations.35, 36, 37, 38 All cancer cell lines except for the p53 null Hep3B displayed a clear NIS mRNA expression, whether they harbored a wild-type or a mutated p53. In agreement with previous studies of NIS expression in normal liver,9 primary human hepatocytes (PHH) display only a very weak NIS expression (Figure 1a). NIS protein was detected in the HuH7, CCLP1 (Figure 1b) and HepG2 (Figure 1c) cell lines, and not in PHH or Hep3B cells Figure 1b). Note that the NIS protein is almost completely accumulated at the cell surface in the HepG2 cell line (Figure 1c). In silico analysis of the NIS regulatory region (−5000/+1500 relative to human NIS gene transcription start site (TSS)) using the Genomatix package (www.genomatix.de) (cutoff score of 80%) allowed us to identify several p53-responsive elements grouped into two putative regulatory clusters called ‘A’ and ‘B’ (p53-responsive element; p53RE) (Figure 1d). Cluster A includes three p53 sites located between −1600 and −2000 bp and corresponds to the p63-binding region previously identified by Testoni et al.39 Cluster B resides within the NIS proximal promoter region20 and includes five p53REs located between −400 and −700 bp. Moreover, we found six conserved SP1-binding sites in the human NIS proximal promoter, one in cluster A and many additional ones either downstream the ATG or upstream cluster A. We performed chromatin immunoprecipitation (ChIP) assays in PHH, HepG2 cells and CCSW1 cells to study the binding of the p53-family members to clusters A and B of the NIS gene. In the HepG2 and CCSW1 cancer cell lines, all the p53-family members showed a low binding to cluster A (Figure 1e). Cluster B displayed an overall higher occupancy by the p53-family members. A particularly strong binding to cluster B was found for p53 and p73 in HepG2 cells, and for p63 and p73 in CCSW1 cells (Figure 1e). In PHH, a low binding to both clusters was found for p53, p73 and, even more so, p63. Control PCR reactions using distant NIS primers did not amplify any anti-p53, anti-p63 or anti-p73 ChIPed products (data not shown). Furthermore, ChIP analysis of SP1 occupancy showed an uniform recruitment to both cluster A and cluster B in all three cell types (Supplementary Figure S1 and data not shown), suggesting that the differential recruitment of p53, p63 and p73 according to cluster and cell type might have functional relevance.
p53-family members activate NIS expression in liver cancer cells
We investigated the ability of the p53-family members to regulate NIS promoter activity. HCC (HepG2, Huh7 and Hep3b) and CCA (CCSW1 and CCLP1) cell lines were co-transfected with a NIS promoter luciferase (NIS-Luc) reporter plasmid containing the −2000/+375 sequence of NIS promoter and encompassing clusters A and B either alone or together with expression plasmids encoding p53, p63α and p73α. Protein levels of exogenously expressed p53, p63α and p73α are shown in Supplementary Figure S2. Luciferase activity assayed 24 h after transfection and normalized for transfection efficiency using the dual-luciferase reporter system was expressed as fold induction over the control. Exogenously expressed p63α and p73α elicited an important stimulation of the NIS-Luc reporter plasmid in all the HCC cell lines studied (Figure 2a). Exogenous p63α and p73α both activated the NIS gene promoter in the CCLP1 CCA cell line, whereas only p73α had a significant stimulatory effect in CCSW1 cells. Exogenous p53 activated the NIS gene promoter in Huh7 and Hep3B cells, but had no significant effect in HepG2, CCLP1 or CCSW1 cells. The expression level of the endogenous NIS mRNA was strongly increased in HepG2 cells after transfection with the expression vectors for p73α (about 10x increase) and to a lesser extent with the p63α vector (Figure 2b). The ability of exogenously expressed p63α and p73α to increase NIS protein levels in HepG2 cells was confirmed by immunoblotting (Figure 2c). In CCSW1 cells, both p63α and p73α induced a significant increase in NIS mRNA expression (Figure 2b). The role of p53-family members in the transcriptional regulation of NIS expression was further confirmed by the strong effect of the abrogation of p53, p63 and p73 expression by specific siRNAs (Supplementary Figure S3) on NIS promoter activity (Figure 2d). Altogether, these results clearly imply that the p53-family members are involved in the regulation of NIS transcription in liver cancer cell lines.
Doxorubicin increases NIS expression in liver cancer cells
The p53 tumor suppressor protein is a potent inducer of tumor cell death, which is activated in response to DNA damage and DNA-damaging agents through specific post-translational modifications. There is an increasing evidence that the p53 paralogs p73 and p63 are also activated in response to DNA damage and have an important role in the chemosensitivity of tumor cells.40 The genotoxic drug doxorubicin is known to induce an accumulation of p53-family proteins in numerous different cell types.40 As NIS is a direct target of the p53-family members, we investigated the effects of doxorubicin on NIS promoter activity and expression. The tumor cell lines HepG2, Huh7, Hep3B and CCSW1 were transfected with the −2000/+375 NIS-Luc reporter plasmid and exposed to an apoptotic dose (2 μM) of doxorubicin. It was found that NIS promoter activity was strongly induced (∼50-fold) by doxorubicin in HepG2 and, to a lesser extent (5-fold), in CCSW1 cells (Figure 3a). NIS upregulation diminished by 50% upon siRNA interference for p53 (Supplementary Figure S4). Endogenous NIS mRNA expression was likewise upregulated by doxorubicin in HepG2 and CCSW1 cells (Figure 3b). NIS promoter activity and NIS mRNA levels were strongly induced in response to doxorubicin also in Huh7 cells harboring a mutant p53 (Figures 3a and b). As shown in Supplementary Figure S5, NIS activation in response to doxorubicin was accompanied in Huh7 cells by a sharp recruitment of TAp73α on the NIS promoter, whereas p63 occupancy was not affected. No significant NIS induction was observed in Hep3B cells, which are p53 null and do not express p7341, 42 (Figures 3a and b). PHHs also did not upregulate NIS expression in response to doxorubicin (Figure 3b). A strong induction of NIS promoter activity was also observed in HepG2 cells exposed to etoposide and cisplatin (Supplementary Figure S6). Altogether, these observations demonstrate that NIS is activated by p53 and p53-related proteins at the transcriptional level in response to DNA damage in liver cancer cells.
The p53-family proteins are differentially recruited to the NIS proximal promoter in response to doxorubicin
Next, we compared the binding of the p53-family members with the NIS promoter region in liver cells before and after doxorubicin treatment. ChIP analysis was performed in HepG2, CCSW1 and PHH cells either exposed to 2 μM doxorubicin or left untreated. Figure 4 shows the real-time PCR quantification of p53, p63 and p73 recruitment to region A (upper panels) and region B (lower panels) of the NIS promoter, expressed as relative enrichment factor between doxorubicin-treated and untreated cells. Control PCR reactions using distant NIS primers did not amplify any anti-p53, anti-p63 or anti-p73 ChIP-ed DNA (data not shown). No increase in the binding of the p53-family members to region A following doxorubicin stress was observed in HepG2 and CCSW1 cells (Figure 4, upper panels). In contrast, p53 and p73 (but not p63) were actively recruited to region B in response to doxorubicin in both cell lines. In PHH, doxorubicin did not induce any significant recruitment of p53 and p73 to region A and caused only a slight increase in the recruitment of p63 and p73 to region B. These data demonstrate a differential recruitment of the p53-family proteins to the NIS promoter in response to a doxorubicin-induced stress and suggest that these transcription factors, mostly p53 itself, specifically regulate region B of the NIS promoter in response to DNA damage.
NIS contributes to DNA damage-induced apoptosis in HepG2 cells
The function of NIS over-expressed in many cancers is unknown. In this study, we have shown that DNA damage triggers a transcriptional activation of NIS in liver cancer cells that is mediated by p53 and p53-related proteins, and suggests that NIS could be involved in DNA damage-induced apoptosis. We therefore investigated the role played by an accumulation of NIS in the response of liver cancer cells to doxorubicin-induced apoptosis. Exposure to 2 μM doxorubicin induced both apoptosis, as evidenced by detection of poly (ADP-ribose) polymerase (PARP)-cleaved fragments, and accumulation of mature 97 kDa NIS species in HepG2 cells (Figure 5a). Similar results were obtained in CCSW1 cell (Supplementary Figure S7). Flow cytometry analysis of intact living cells exposed to doxorubicin showed a statistically significant, although moderate, increase of NIS expression both at the cell surface and intracellularly in HepG2 cells (Figure 5b). A small but consistent and significant increase of NIS protein expression at the cell surface was also detected in CCSW1 CAA cells (Supplementary Figure S8), but not in the p53 null cell line Hep3b (Supplementary Figure S8). We also studied the response of HepG2 cells to doxorubicin after knockdown of endogenous NIS protein expression by specific siRNAs (Supplementary Figure S9). We found that NIS silencing caused a reduction of PARP cleavage (Figure 5c) and a substantial decrease of the percentage of both early (annexin V+ve PI−ve) and late (annexin V+ve, PI+ve) apoptotic cells, but not of necrotic cells (annexV−ve PI+ve) (Figure 5d). Conversely, when HepG2 cells were transfected with a NIS expression vector we could show an accumulation of cleaved PARP (Figure 5e), caspase 7 and caspase 3 (Supplementary Figure S10) levels. Together, these results indicate that NIS contributes to DNA damage-induced apoptosis in liver cancer cells and would suggest that NIS has a role in DNA damage-induced apoptotic cell death.
Discussion
NIS is expressed in many human cancers, such as differentiated thyroid cancers, breast cancer, CCAs and hepatocellular carcinoma.3, 4, 5, 9 In thyroid cancers, NIS expression is largely controlled by the thyroid-selective transcription factors Pax-8 and Nkx2.1, which target the upstream enhancer (NUE) (−9470 and −9046 relative to the ATG),19, 20 and by the cardiac homeobox transcription factor Nkx2.5,34 which regulates the activity of the NIS core promoter (−475 and −393). The transcription factors and the signaling pathways that control NIS expression in non-thyroid cancers are still largely unknown. To gain insight into this issue, we investigated the modulation of NIS expression by, on one hand, the p53 and p53-related transcription factors in liver cancer cells and PHHs, and, on the other hand, the DNA-damaging drug doxorubicin, which is known to induce an accumulation of, and activate, the p53-family proteins in a variety of cell types.40
The potential role of p53-family members in the regulation of NIS expression was first suggested by the demonstration that NIS is a direct target gene modulated by p63 in keratinocytes39 and by in silico analyses bringing to light two putative regulatory clusters of p53REs bound by the all the p53-family members (i.e., p53, p63 and p73) in the NIS regulatory region. We found that NIS is expressed in PHH and overexpressed in CCA and HCC cell lines, except for the Hep3B cells, that are p53 null and do not express p73.38, 41, 42 Loss of p53 function is closely associated with the development of hepatocellular carcinoma (HCC) and CCA.43, 44 In HCCs, the mutation frequency of the p53 gene is of 30% on average, but ranges from 0 to 67% depending on the geographical area and the etiological factors.45, 46 In CCAs, the p53 gene mutation frequency also shows a high variability with reported values ranging from 20 to 61%.47, 48 TP63 and TP73 are only rarely mutated but are often deregulated with an overexpression of DTA- and DN-dominant negative and transactivation-deficient p73 isoforms generated, respectively, by alternative splicing from the P1p73 promoter or usage of the alternative internal P2p73 promoter.49, 50, 51 TP63 mRNA and protein levels are also detected in liver cells and HCC cell lines.52 Immunohistochemical studies have also show that p63 expression is upregulated in CCAs, especially poorly differentiated ones.53
By combining reporter luciferase assays, endogenous mRNA expression analysis, chromatin immunoprecipitation experiments and siRNA-mediated silencing, we have shown that NIS expression is controlled by the p53-family members in normal and transformed hepatocytes. ChIP analysis showed that the two clusters of p53-responsive elements we identified in the NIS proximal promoter are both functional and are occupied differentially by the p53-family proteins to regulate the basal and doxorubicin-induced transcription of NIS. A correlation between p53 inactivation, thyroid cancer aggressiveness and lack of differentiation markers, including NIS, has long been noted.54, 55 However, whether NIS is a target gene for p53-family members in the context of thyroid cancer remains to be determined. Interestingly, in PHHs, the binding of the p53-family members to the NIS promoter is low in the basal state and only modestly augmented by a doxorubicin treatment, which, consequently, fails to induce any significant NIS expression. The observed differences in the regulation of NIS gene expression between normal and cancer liver cells likely reflects the complexity of the p53 family, which includes a large number of isoforms that can have opposite transcriptional effects in different cells and cell states. Whether similar differences in p53-dependent NIS gene activation between normal and cancer cells also exist in tissues other than the liver remains to be investigated.
The role of the p53-family members as tumor suppressors as well as effectors of cell cycle arrest and cell death in response to DNA damage is well recognized.40, 56 Here we show that, in response to doxorubicin, p73 and p53 are actively recruited to the NIS promoter leading to an increase of endogenous NIS expression and detection of the NIS protein at the cell surface. ChIP analysis also showed that the two clusters of p53RE in the NIS promoter are used differentially to regulate basal and doxorubicin-induced NIS transcription by the p53-family members.
To evaluate whether the p53-mediated NIS gene induction contributed to cellular responses following DNA damage, we modulated NIS levels either by specific siRNA or by transfection of a NIS expression vector in HepG2 cells exposed to doxorubicin. We found that silencing NIS expression decreased doxorubicin-induced apoptosis in liver cancer cells, and, conversely, overexpressed NIS favors PARP cleavage and apoptosis, pointing to a possible, as-yet unsuspected, role of NIS accumulation in apoptotic cell death.
Altogether, our results unveil a complex transcriptional network involving the p53 family, and suggest that the modulation of NIS by DNA-damaging agents is potentially exploitable to boost NIS upregulation in vivo. NIS-mediated iodide accumulation within thyroid cell is the basis for thyroid nodules scintigraphic evaluation of radioiodine-based treatment of post-surgical residual, recurrent or metastatic disease in thyroid cancer. Significant efforts have been made to exploit NIS for developing radioiodine-based diagnostic and therapeutic procedures in non-thyroid malignant diseases has been reviewed.20 In non-thyroid tumors, NIS expression is generally lower than in thyroid cancers and NIS protein is prevalently, if not exclusively, cytoplasmic.19, 20 Nevertheless, some NIS mRNA expressing breast cancers display iodine scintigraphic uptake.11 A selective induction of NIS in tumor cells might be instrumental for developing NIS-mediated radionuclide therapy and represent an attractive alternative to NIS DNA-mediated transduction. Our finding that doxorubicin induced NIS protein selective accumulation in liver cancer cells might suggests to consider a combination of doxorubicin and radioiodine therapy against NIS-expressing non-thyroid cancers.
Materials and Methods
Cell lines and DNA transfection
Human hepatoma Hep3B, HepG2, HuH7 and CCA CCSW1 and CCLP1 cell lines were cultured in Dulbecco’s modified Eagle’s medium with 10% fetal bovine serum. PHHs were prepared from two adult patients undergoing lobectomy or segmental liver resection for medically required purposes unrelated to this research program. FT304 was a 52-year-old female transplant donor and FT310, a 60-year-old female, undewent liver resection for a cystadenoma. Both patients were negative for HBV, HCV and HIV. The two patients gave their written informed consent and the use of the their liver specimens for scientific purposes was approved by the French National Ethic Committee. PHH were prepared and cultured as described elsewhere.57 PHH were plated into collagen-coated dishes (BD Biosciences, Franklin Lakes, NJ, USA) at 1.7 × 105 cells/cm2 in a hormonally and chemically defined medium.57
Cells transfections with the indicated luciferase reporters, expression vectors encoding p53-family members or NIS and Renilla luciferase pRL null vector were performed using TransIT-TKO and TransIT-LT1 reagents from Mirus (Mirus Bio LLC, Madison, WI, USA). When indicated, 24 h after transfection cells were treated with Doxorubicin (Sigma-Aldrich, St Louis, MO, USA) for additional 24 h. Cell lysates were assayed for luciferase activity using the dual-luciferase assay system (Promega, Fitchburg, WI, USA).
Antibodies, plasmids, siRNAs and chemicals
The following antibodies were used: anti-p53 (DO1) mouse monoclonal, anti-p63 (4A4) rabbit polyclonal from Santa Cruz Biotechnology Inc. (San Diego, CA, USA); anti-p73 mouse monoclonal (IMG-259A) from Imgenex (San Diego, CA, USA), anti-cleaved PARP rabbit polyclonal from Cell Signaling Technology (Danvers, MA, USA); anti-NIS LP10 rabbit polyclonal.9, 58 pcDNA-HA-P53, pcDNA-HA-P63α, pcDNA-HA-P73α expression vectors are transfected into cells using TransIT-TKO and TransIT-LT1 reagents from Mirus (Mirus Bio LLC).59 pcDNA-NIS expression vectors are described elsewhere.18 The NIS promoter luciferase reporter construct p2.0-NIS-luc was described by Ryu.60 Double-stranded Smart Pool siRNA specific for human NIS, p53, TAp63, TAp73 and control siRNA were purchased from Dharmacon Research (Lafayette, CO, USA) and transfected into cells using TransIT-TKO and TransIT-LT1 reagents from Mirus (Mirus Bio LLC). Doxorubicin (D1515) was purchased from Sigma (Sigma-Aldrich).
Immmunoblotting
Protein extracts were prepared in RIPA buffer (10 mM Tris-HCl, pH 7.5, 137 mM NaCl, 1 mM EDTA, 0.5 mM EGTA, 1% Nonidet P-40, 0.1% SDS, 0.1% sodium deoxycholate, 1% Triton X-100) containing protease inhibitors. Cell surface proteins were isolated using the Pierce Cell Surface Protein Isolation Kit (Thermo Fisher Scientific Inc., Waltham, MA, USA). Samples were analyzed by electrophoresis with Tris-acetate or Bis-Tris minigels (NuPAGE). Equal amounts of protein extracts were separated on 10% SDS-PAGE, transferred onto nitrocellulose (GE-Amersham, Healthcare Life Sciences, Uppsala, Sweden) and processed for immunoblot using HRP-conjugated secondary antibodies Santa Cruz Biotechnology Inc. and chemoluminescence (GE-Amersham).
Quantitative RT-PCR
Total RNAs were isolated using Trizol reagent (Invitrogen, Carlsbad, CA, USA) and then reverse transcribed into cDNA using a Revert Aid First Strand cDNA Synthesis Kit (Thermo Fisher Scientific Inc.,), amplified and quantified by detection of SYBR Green (Roche Diagnostics, Indianapolis, IN, USA). They were quantified by nano-drop and their quality was assessed by electrophoresis. Real-time PCR and melting curve analysis were done in a LightCycler 3.0 (Roche Diagnostics) using SYBR Green master mix (Roche Diagnostics). The following primers were purchased from (Invitrogen): NIS, forward (fwd) (5′-CTTCTGAACTCGGTCCTCACAC-3′) and reverse (rev) (5′-TCCAGAATGTATAGCGGCTC-3′).
ChIP assay
Protein complexes were cross-linked to DNA in living nuclei by adding 1% of formaldehyde (Merck, Whitehouse Station, NJ, USA) to the culture medium for 10 min at room temperature. Crosslinking was stopped by the addition of 0.125 M glycine. Cross linked cells were scraped, washed with PBS. Cells were pelleted by centrifugation and lysed in nuclear lysis buffer (1% SDS, 10 mM EDTA, 50 mM Tris-Hcl pH 8.1, 0.5 mM phenylmethylsulfonyl fluoride PMSF, 100 ng/ml leupeptin, 100 ng/ml aprotinin). The resulting chromatin solution was sonicated for 10 pulses of 45 s at high power (Bioruptor sonicator, Diagenode, Liege, Belgium) to generate 500–1500 bp DNA fragments. After microcentrifugation, the supernatant was precleared with blocked protein G plus (Pierce, Rockford, IL, USA) diluted 1 : 10 with dilution buffer (0.01% SDS, 1.1% Triton X-100, 1.2 mM EDTA, 16.7 mM Tris-Hcl pH 8.1, 167 mM NaCl, 0.5 mM PMFS, 100 ng/ml leupeptin, 100 ng/ml aprotinin), and divided into aliquots. Five micrograms of antibody was added to each aliquot of chromatin and incubated on a rotating platform for 12–16 h at 4 °C. Antibody–protein–DNA complexes were isolated by immunoprecipitation with blocked protein G plus. Following extensive washings, ChIPed DNA was analyzed by qPCR using SYBR Green master mix (Roche Diagnostics) in a LightCycler480 (Roche) with the following primer pairs: Primer A- FOR 5′-CCTGAGATGACAGCTCGTTGG-3′; primer A-REV 5′-AATGGGACGTGGTAACGAAAGC-3′; primer B –FOR 5′-GGAGCCCAATAAATCTGCAA-3′; primer B- REV 5′-GTC TGTCTGTCCTGCCACCT-3′.
Flow cytometry
Primary antibody staining was performed by incubating cells for 45 min on ice with 10 ug/ml of LP10 polyclonal rabbit anti-NIS. After extensive washing, secondary FITC-conjugated goat anti-rabbit antibody (Invitrogen) was added and cells were incubated for further 30 min on ice. All incubation and washing steps were performed in PBS with 2% FBS. Data were acquired on a FACSCanto (Becton Dickinson, Franklin Lakes, NJ, USA) and analyzed with FlowJo software (Treestar Inc, Ashland, OR, USA, version 8.8.7) and Prism software (GraphPad, Software Inc, La Jolla, CA, USA, version 4). NIS relative expression in each sample was calculated as the ratio between the median fluorescent intensity of sample stained with both primary and secondary Abs, and the MFI of sample stained with secondary Ab alone.
Abbreviations
- NIS:
-
sodium/iodide symporter
- p53-RE:
-
p53-responsive element
- PHH:
-
primary human hepatocytes
- CCA:
-
cholangiocarcinoma
- HCC:
-
hepatocellular carcinoma
- MAPK:
-
mitogen-activated protein kinase
- NUE, NIS:
-
upstream enhancer
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Acknowledgements
We thank J Hervé, N Moniaux (INSERM U785, Villejuif) and J Clerc (Paris Descartes University) for insightful discussions; P Pineau (Pasteur Institute, Paris) for providing liver cancer cell lines. This work was supported by Grants from INSERM, Association pour la Recherche contre le Cancer (ARC 3555, ARC 4866; to JF) and Institut National du Cancer (INCa PL027, INCa 2009-PAIR-CHC; to JF); Associazione Italiana per la Ricerca sul Cancro (AIRC) to ML; MIUR-Cofin and Progetti di Ateneo, Sapienza University of Rome to ML. FG has been supported by fellowships from the Fondazione A. Cesalpino and Rome Oncogenomic Center at the Regina Elena Cancer Institute.
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Guerrieri, F., Piconese, S., Lacoste, C. et al. The sodium/iodide symporter NIS is a transcriptional target of the p53-family members in liver cancer cells. Cell Death Dis 4, e807 (2013). https://doi.org/10.1038/cddis.2013.302
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DOI: https://doi.org/10.1038/cddis.2013.302
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