Abstract
The NF-κB pathway has important roles in innate immune responses and its regulation is critical to maintain immune homeostasis. Here, we report a newly discovered feedback mechanism for the regulation of this pathway by TLR ligands in macrophages. Lipopolysaccharide (LPS) induced the expression of ICER via p38-mediated activation of CREB in macrophages. ICER, in turn, inhibited the transcriptional activity of NF-κB by direct interaction with the p65 subunit of NF-κB. Deficiency in ICER elevated binding of NF-κB to promoters of pro-inflammatory genes and their subsequent gene expression. Mice deficient in ICER were hypersensitive to LPS-induced endotoxic shock and showed propagated inflammation. Whereas ICER expression in ICER KO bone marrow transplanted mice rescued the ultra-inflammation phenotype, expression of a p65 binding-deficient ICER mutant failed to do so. Our results thus establish p38-CREB-ICER as key components of a negative feedback mechanism necessary to regulate TLR-driven inflammation.
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Main
Activation of TLR4, a pattern recognition receptor used in the innate immune system, by lipopolysaccharide (LPS) leads to the transcription of pro-inflammatory mediators that promote innate immune responses.1 One critical pathway triggered by TLR4 is the NF-κB pathway.2 TLR4 initiates a signaling cascade through adapter molecules MyD88 and TRIF, resulting in TRAF6 activation. TRAF6 in turn triggers the phosphorylation of IκB by IKK and proteosomal degradation of IκB. Subsequently, NF-κB disassociates from IκB and translocates to the nucleus where it promotes the transcription of genes involved in pro-inflammatory responses.3, 4 Activation of TRAF6 also leads to downstream activation of the MAPK cascade, including JNKs and p38 isoforms.5 The p38 pathway has attracted considerable interest as a possible target for anti-inflammatory drugs. Activation of p38 results in the activation of CREB, a transcription factor that regulates diverse cellular responses including proliferation, survival and immune responses. CREB is phosphorylated and activated by MSK1/2, a downstream kinase of p38, and subsequently mediates the transcription of genes containing a cAMP-responsive element. Several anti-inflammatory genes possess this cAMP-responsive element, including Dusp1 and IL-10.6 In addition, phosphorylated CREB has been proposed to directly inhibit NF-κB activation by blocking the binding of CREB binding protein to the NF-κB complex, thereby limiting pro-inflammatory responses.7
Inducible cAMP early repressors (ICERs) are members of the cAMP-response element (CRE) modulator family and are induced by CREB.8 ICER is transcribed via an alternative internal promoter in the CREM gene and consists of four different isoforms generated by alternative splicing of its transcript (ICERI, ICERIγ, ICERII, ICERIIγ).9 The isoforms encode either CREB-like (ICERI) or CREM-like (ICERII) DNA-binding domains (DBDs) with or without the alternatively spliced exon γ.10, 11 ICER proteins contain DBDs but not the N-terminal transactivation domain. This makes them function as endogenous inhibitors of gene transcription by competing with CREB in binding CRE sequences. Hence, under physiological conditions, ICER induction is a transient phenomenon that allows cAMP signaling to return to the basal state. However, whether or not ICER also mediates the anti-inflammation effect of CREB in immune responses has remained unknown.
In this study we characterized a feedback mechanism for the regulation of the NF-κB pathway in macrophages. In this mechanism, LPS induces the expression of ICER via p38-mediated CREB activation and ICER, in turn, inhibits the transcriptional activity of NF-κB through direct interaction. This mechanism serves as an important feedback mechanism in preventing excessive inflammation.
Results
LPS stimulates ICER expression via p38-CREB pathway
To test correlation of ICER expression with pathological sepsis status, mice were intraperitoneally injected with different doses (0, 10, 20, 30 mg/kg) of LPS and mRNA levels of ICER in whole blood cells, spleen and liver were screened by quantitative real-time PCR. As shown in Figure 1a, the expression of ICER was significantly upregulated in a dose-dependent manner by LPS treatment. In mouse peritoneal macrophages (PMs), LPS also stimulated ICER mRNA levels in a time-dependent manner (Figure 1b). In addition to LPS, which activates TLR4, ligands for other TLRs as well as TNFα and IL-1β stimulated the expression of ICER in PMs (Supplementary Figure S1A and S1B).
Next, we investigated the mechanism by which ICER expression was regulated by TLR4 signaling. LPS stimulates both NF-κB and MAPK pathways in macrophages, prompting us to test the effect of various NF-κB and MAPK inhibitors. Pretreatment of PMs by JNK inhibitor SP600125 or IKK inhibitor Wedelolactone had no effect on LPS-induced ICER upregulation; however, when p38 activity was inhibited by SB203580 or SB202190, LPS-induced ICER expression was greatly impeded (Figure 1c and Supplementary Figure S2A). Meanwhile, other TLRs ligand-induced ICER upregulation was also attenuated by SB203580 or SB202190 treatment (Supplementary Figure S2B). P38 has been shown to promote CREB phosphorylation and activation through MSK1/2 under LPS stimulation.6 Taking into consideration the important function of CREB on ICER expression, we speculated that CREB may mediate LPS-induced ICER upregulation. Indeed, exposure of PMs to LPS increased CREB Ser133 phosphorylation and this effect was reduced by SB203580 or SB202190 (Figure 1d and e and Supplementary Figure S2C). Next, we tested the importance of CREB for LPS-induced ICER expression using homozygous CREB-floxed (CREB fl/fl) mice expressing a macrophage-specific LysM-cre transgene (MCREB KO). In PMs from MCREB KO mice, LPS-induced ICER expression was largely decreased compared with PMs from WT mice (Figure 1f). We further evaluated the role of CREB in LPS-induced ICER expression by expressing the dominant-negative CREB inhibitor ACREB, a synthetic polypeptide that selectively heterodimerizes with, and disrupts, the DNA-binding activity of all CREB family members (CREB1, CREM, and ATF1) in WT PMs.12 Similar to knocking out CREB in PMs, ACREB expression disrupted LPS-induced ICER gene expression (Figure 1g). Exposure to LPS consistently increased phospho-CREB occupancy over the ICER promoter in PMs (Figure 1h) and this effect was inhibited by SB203580 or SB202190 (Figure 1i). Taken together, these results demonstrate that the p38-CREB pathway is required for the induction of ICER expression following exposure to LPS.
ICER deficiency promotes p65 DNA-binding and inflammatory responses in macrophage
Since ICER expression was upregulated by TLRs, we evaluated the loss of function of ICER using PMs from ICER knockout mice to compare pro-inflammatory cytokines profiles. Notably, ICER-deficient macrophages expressed significantly higher levels of Tnfα and Il-6 mRNAs when they were stimulated by LPS (Figure 2a). Consistently, deficiency in ICER resulted in more production of TNFα and IL-6 by LPS-stimulated PMs (Figure 2b). In consistent with its suppression on LPS-induced ICER gene expression, ACREB expression promoted LPS-induced Tnfα and Il-6 gene expression in PMs (Supplementary Figure S3A). In contrast, exposure to Forskolin (FSK), a commonly used CREB activator through raising the levels of intracellular cAMP, further stimulated LPS-induced Icer expression in wild-type PMs but failed to do so in ICER-deficient PMs. As a result, LPS-induced Tnfα and Il-6 gene expression was suppressed by FSK more dramatically in WT compared with ICER-deficient PMs (Supplementary Figure S3B). This finding suggests that ICER might be involved in the activation of negative feedback pathways downstream of p38 and CREB. To understand how ICER regulates the expression of inflammatory genes, we first examined whether or not ICER deficiency affected LPS-stimulated MAPK and NF-κB signaling in PMs. As shown in Figure 2c, ICER deficiency did not significantly affect the phosphorylation levels of JNK, p38, IKK, and CREB in PMs stimulated with LPS, nor did it affected the degradation of IκBα (Figure 2c). LPS-induced nuclear accumulation of the NF-κB subunit p65 was also not influenced by ICER deficiency (Figure 2d). These results suggest that ICER may not be involved in MAPK and NF-κB signaling. Therefore, we examined the effect of ICER on the binding of p65 to the promoters of its downstream target genes by ChIP assay. Exposure to LPS increased p65 occupancy over Tnfα, Il-6, and Iκbα promoters more dramatically in ICER-deficient PMs compared with WT (Figure 2e), suggesting that ICER regulates the expression of NF-κB downstream target genes by affecting the binding of NF-κB to its promoter. Taking into consideration the important function of p38 on ICER expression, we speculated that p38 may suppress the binding of NF-κB to downstream target genes promoter through ICER. Indeed, exposure of PMs to p38 inhibitor SB203580 or SB202190 promoted LPS-induced p65 occupancy over Tnfα, Il-6, and Iκbα promoters more dramatically in WT PMs compared with ICER-deficient PMs (Supplementary Figure S3C).
ICER inhibits NF-κB activation via binding to p65
It is reported that bZIP-containing proteins such as Fos, Jun, and BZLF interact with p65 through the bZIP domain.13, 14, 15 Based on the fact that ICER also contains bZIP domain, we tested whether ICER associates with p65. Indeed, we recovered all four isoforms of HA-tagged ICER via immunoprecipitation (IP) with Flag-tagged p65 (Figure 3a). Consistent with this association, overexpression of epitope-tagged ICER decreased NF-κB reporter activity in cells co-expressing MyD88, TRIF, TRAF6, or p65 (Figure 3b). Furthermore, when PMs were infected with lentivirus expressing ICER isoforms, LPS-stimulated Tnfα and Il-6 mRNAs levels were significantly decreased (Figure 3c). The PEST peptide sequence is rich in proline (P), glutamic acid (E), serine (S), and threonine (T). It has been reported that a PEST sequence in IκB proteins directly interacts with the p65 N-terminal domain.16, 17 Based on this, we tried to identify a PEST-like sequence in the bZIP domain of ICER that may mediate its interaction with p65. We used the PESTfind analysis tool (http://emboss.bioinformatics.nl/cgi-bin/emboss/epestfind)18 to search for putative PEST sequences in ICER isoforms and found that ICER1 has a potential PEST motif (amino acids 61–72) in its bZIP domain that is conserved through all four isoforms. To further establish the interaction domain of ICER with p65, various forms of ICER1 with mutations adjacent to this potential PEST sequence: ICER1 E68/69A (2EA), ICER1 P63A (PA), ICER1 S56/59/62A (3SA) were tested for the ability to bind to p65. Flag-tagged p65 was found to associate with HA-tagged ICER1 as well as ICER1 2EA, ICER1 PA mutants; however, mutation of Ser56/59/62 to Ala (3SA) disrupted the ICER1:p65 interaction (Supplementary Figure S4A). Indeed, we were able to recover ICER1 but not ICER1 3SA via IP with Flag-tagged p65 and vice versa (Figure 3d). Next, the in vitro pull-down assay was applied to further confirm ICER-p65 interaction. Purified p65 could pull-down purified HA-tagged ICER1 but not ICER1 3SA (Figure 3e). Consistently, overexpression of either ICER1, ICER1 2EA, or ICER1 PA but not ICER1 3SA decreased NF-κB reporter activity in cells co-expressing p65 (Supplementary Figure S4B).
To explore whether ICER interaction with p65 directly inhibits p65 DNA-binding activity, we first mapped the region on p65 that mediated ICER binding. Deletion of N-terminus DBD of p65 resulted in complete loss of its ability to bind to ICER1. In contrast, deletion of C-terminus Transactivation domain of p65 had little influence on the interaction with ICER1 (Supplementary Figure S5A and S5B). Indeed, purified ICER1 but not ICER1 3SA suppressed purified p65 DNA-binding activity as tested by EMSA (Figure 3f); strongly suggesting that ICER binds to the DBD of p65 to suppress its DNA-binding activity. As a result, lentivirus encoded expression of ICER1, but not ICER1 3SA, attenuated LPS-stimulated Tnfα and Il-6 mRNAs levels in PMs (Figure 3g). Furthermore, whereas p65 occupancy over Tnfα, Il-6, and Iκbα promoters was dramatically inhibited by ICER1 expression, ICER1 3SA failed to show any effect (Figure 3h). Taken together, these data indicated that ICER inhibits NF-κB transcriptional activity via its binding to p65.
Anti-inflammatory effects of ICER in mice
Intraperitoneal injection of LPS in mice can lead to endotoxic shock and mortality. Based on the results above, we predicted that the ICER KO mice would be more sensitive to LPS-induced endotoxic shock in comparison with WT mice. Indeed, when mice were given a typically sub-lethal dose of LPS, ICER KO mice were more susceptible to LPS-induced lethality than WT mice (Figure 4a). In similar experiments, we injected mice with different doses of LPS (0, 10, 20 mg/kg) and measured plasma cytokine concentrations after 4 h. Notably, TNFα and IL-6 concentrations were much higher in ICER KO mice than in wild-type mice (Figure 4b). Whereas spleens and livers showed extensive inflammation after LPS injection, the elevated pro-inflammatory gene expression, including Tnfα and Il6, was consistently more dramatic in ICER KO mice (Figure 4c). Furthermore, to avoid complications that may result from ICER expression in non-hematopoietic cells, γ-irradiated WT mice were transplanted with bone marrow (BM) from WT mice or ICER KO mice. ICER KO BM-transplanted mice were significantly more susceptible to LPS-induced septic shock in comparison with WT BM-transplanted mice as evidenced by survival curves (Figure 4d) and serum cytokine levels (Figure 4e). Notably, transplantation of ICER KO BM infected with lentivirus encoding ICER1 but not ICER1 3SA rescued this phenotype (Figure 4d and e).
Based on the effects of CREB on LPS-induced ICER expression, we evaluated the importance of CREB deficiency on LPS-induced endotoxic shock using macrophage-specific CREB knockout mice (CREB MKO). When given a sub-lethal dose of LPS, CREB MKO mice were more susceptible to LPS-induced lethality than WT mice (Supplementary Figure S6A). Serum TNFα and IL-6 concentrations were much higher in ICER KO mice than in wild-type mice (Supplementary Figure S6B). Furthermore, lentivirus encoded expression of ICER1, but not ICER1 3SA, attenuated LPS-stimulated Tnfα and Il-6 mRNAs levels in PMs from CREB MKO mice (Supplementary Figure S6C). These results, together with the data from ICER KO mice, suggest that CREB-ICER pathway has an important feedback role in LPS-induced NF-κB activation and acute endotoxic shock.
Discussion
CREB has critical roles in innate immune responses. CREB has been shown to inhibit NF-κB activity through competition for co-activators CBP/p300.7, 19 CREB also has an essential role in the production of IL-10, a potent anti-inflammatory cytokine that mediates feedback inhibition.6, 20 Our previous work showed that CREB induces the M2 polarization of macrophages, an anti-inflammatory phenotype, via the induction of KLF4.12 In the present work, we describe a previously unrecognized negative feedback mechanism for the regulation of NF-κB by TLR ligands via CREB-induced ICER. In this mechanism, ICER expression is upregulated by TLR ligands via p38-mediated CREB activation, and ICER, in turn, inhibits NF-κB transcriptional activity by interaction with the NF-κB p65 subunit. This mechanism has an important role in limiting inflammation both in vitro and in vivo. Thus, a systematic investigation into the role of CREB in innate immune function would likely lead to new therapeutic strategies for manipulation of inflammatory responses.
Owing to the use of the alternative P2 promoter located in the middle of the CREM gene, ICER lacks the upstream transactivation domain of CREM and thus fails to recruit co-activators such as CBP/p300.8 ICER is better known as a repressor for CREB, c-Fos, or c-Jun-mediated transcription.8, 21, 22 ICER could also bind to NF-AT ref. 23 and AP1 ref. 24 inhibiting their transcriptional activity. Here, we report NF-κB as a new class of transcriptional factors that are negatively regulated by ICER, further expanding our fundamental understanding of this repressor. It is tempting to speculate that ICER may serve as a universal transcriptional suppressor that has a broad impact on multiple signal pathways and organ functions under specific physiological conditions. This prompts further study by both our laboratory and others.
Materials and methods
Animals
In total, 8–10-week-old and weight-matched male C57BL/6 J mice were purchased from Shanghai Laboratory Animal Center (Shanghai, China) and were adapted to colony cages with 12 h light/dark cycle in a temperature-controlled environment with free access to water and standard irradiated rodent diet (5% fat; Research Diet, D12450, New Brunswick, NJ, USA). ICER knockout mice were kindly provided by Dr. Shogo Endo (Tokyo Metropolitan Geriatric Hospital and Institute of Gerontology). Macrophage-specific knockout of CREB was provided by Dr. Marc Montminy (Salk Institute, La jolla, CA, USA) as described.12
Cells, antibodies, and reagents
Mouse PMs were prepared in our laboratory following procedure described previously.25 In brief, C57BL/6 J or ICER knockout mice and littermates were injected with 3% sterile thioglycollate (Sigma, St. Louis, MO, USA) intraperitoneally (3 ml per mouse). After 3 days, mice were euthanized, and RPMI medium was injected intraperitoneally and then retrieved. The cells were then treated with red blood cell lysis buffer (0.15 M NH4Cl, 10.0 mM KHCO3, and 0.1 mM EDTA) and washed with RPMI medium. The purity of the macrophages was confirmed by flow cytometry. HEK293T cells were obtained from the American Type Culture Collection (ATCC) and maintained in DMEM with 10% fetal bovine serum. Anti-pJNK1/2 (Thr183/Tyr185), JNK1/2, pP38 (Thr180/Tyr182), P38, pIKKα/β (Ser176/Ser180), IκBα, p65 antibodies were purchased from Cell signaling Technology (Danvers, MA, USA). Anti-α-tubulin, p65 antibody was purchased from Abcam (Cambridge, UK). Anti-pCREB (Ser133) and CREB antibodies were purchased from Abmart (Berkeley Heights, NJ, USA). LPS was purchased from Sigma. Pam3Csk4, poly (I:C), and CpG-ODN were from InvivoGen (San Diego, CA, USA). SP600125, SB203280 were from medchemexpress. Wedelolactone was from Sanra Cruz Biotech (Dallas, TX, USA).
Cytokine analysis
Mice were injected with LPS for 4 h and serum was obtained through cardiac puncture. Serum levels of TNFα and IL-6 were determined using Mouse TNFα and IL-6 ELISA kit from ebioscience (San Diego, CA, USA).
ChIP and quantitative real-time-PCR
Cells were plated in 150-mm plates and exposed to LPS (10ng/ml) for 1 h. ChIP assays were performed as described.26 Total RNA was isolated by using TRIzol reagent (Invitrogen, Carlsbad, CA, USA) and reverse transcription was done using FastQuant RT kit (Tiangen, Shanghai, China). Real-time PCR was carried out using SuperReal SYBR Green kit (Tiangen) and Lightcycler 96 (Roche, Penzberg, Germany). β-actin was used as a reference gene. Primer sequences used for real-time PCR:
Tnfα forward 5′-TGAACTTCGGGGTGATCGGTC-3′
Tnfα reverse 5′-AGCCTTGTCCCTTGAAGAGGAC-3′
Il6 forward 5′-GACTTCACAGAGGATACCAC-3′
Il6 reverse 5′-TCTCTCTGAAGGACTCTGGC-3′
Icer forward 5′-TGGACTGTGGTACGGCCAAT-3′
Icer reverse 5′-CAGTTTCATCTCCAGTTACA-3′
β-actin forward 5′-GTGACGTTGACATCCGTAAAGA-3′
β-actin reverse 5′-GCCGGACTCATCGTACTCC-3′
Primer sequences used for ChIP:
Icer promoter Forward 5′-AGGGCTTTGCTTTCAGTGAG-3′
Icer promoter reverse 5′-CTTGTTGGCCGTACCACAGT-3′
Tnfα promoter forward 5′-CCCCAGATTGCCACAGAATC-3′
Tnfα promoter reverse 5′-CCAGTGAGTGAAAGGGACAG-3′
Il6 promoter forward 5′-AGCTACAGACATCCCCAGTCTC-3′
Il6 promoter reverse 5′-TGTGTGTCGTCTGTCATGCG-3′
Iκba promoter forward 5′-AAATCTCCAGATGCTACCCGAGAG-3′
Iκba promoter reverse 5′-ATAATGTCAGACGCTGGCCTCCAA-3′
Blotting and immunostaining
Immunoblot, IP, and immunostaining assays were performed as described.26 The image was caught by Tanon-5500 Chemiluminescent Imaging System (Tanon, China).
Luciferase reporter assay
HEK293T cells were transfected with NF-κB-Luc reporter, RSV-βgal, and indicated plasmids for 48 h and luciferase assays were performed.26
BM transplantation
BM cells were flushed from the tibias and femurs of mice using RPMI supplemented with 10% FBS and penicillin–streptomycin. After RBC lysis, the cells were washed and resuspended in 1 ml PBS containing 107 cells, after infection with 108 lentivirus, 200 μl of BM cells was injected intravenously into lethally irradiated (10 Gy) recipients.
Statistical analysis
All studies were performed on at least three independent occasions. Results are reported as mean±s.e.m. The comparison of different groups was carried out using two-tailed unpaired Student’s t-test or two-way ANOVA test. Differences were considered statistically significant at *P<0.05 and **P<0.01.
Ethics statement
All animal studies were approved by the Animal Experiment Committee of Tongji University and in accordance with the guidelines of School of medicine, Tongji University (Permit Number: TJ0027 Rev2). This study was carried out in strict accordance with the recommendations in the Guide for the Care and Use of Laboratory Animals of the Ministry of Science and Technology of the People's Republic of China.
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Acknowledgements
We thank Dr. Marc Montminy and Susan Hedrick (Salk Institute) for discussion and technical support. We thank Dr. Shogo Endo (Tokyo Metropolitan Geriatric Hospital and Institute of Gerontology) for providing us with ICER KO mice. We thank Dr. Jerome V Karpiak (University of California San Diego School of Medicine, Sanford Consortium for Regenerative Medicine, La Jolla, CA 92037, USA) for English-language editing.
Author contributions
SL, JL, XQ, ZNZ, and BL designed and conducted the experiment and analyzed the data. BL wrote the manuscript. WL, CZ, and ZNZ designed the experiments and edited the manuscript. All authors read and approved the manuscript. BL is responsible for the integrity of the work as a whole.
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Lv, S., Li, J., Qiu, X. et al. A negative feedback loop of ICER and NF-κB regulates TLR signaling in innate immune responses. Cell Death Differ 24, 492–499 (2017). https://doi.org/10.1038/cdd.2016.148
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DOI: https://doi.org/10.1038/cdd.2016.148
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