Table 2: Interval-based enrichment analysis (INRICH) results for the PAX8 pathwaya

From: Enrichment of putative PAX8 target genes at serous epithelial ovarian cancer susceptibility loci

Interval numberIndex SNPChrPosition (hg19)P-valuebGeneGene start (hg19)Gene end (hg19)SNP-gene distance (kb)
1rs22681771224154109.5E−07WNT4224437982247038528
2rs675577721770432269.0E−14HOXD1217696453017696548878
2rs675577721770432269.0E−14HOXD817699442217699742346
3rs1017259522323870635.6E−06NCL23231945923232920558
4rs10069690512797902.0E−10TERT125328712951620
5rs1877597446325391522.1E−05TNF3154334431546112993
6rs46315639169132862.9E−34BNC2164095011687078643
7rs720782617465006739.3E−13OSBPL74588473345899147602
7rs720782617465006739.3E−13SP64592228045933240567
7rs720782617465006739.3E−13HOXB44665286946655743152
7rs720782617465006739.3E−13HOXB54666861946671103168
7rs720782617465006739.3E−13HOXB74668459546688383184
7rs720782617465006739.3E−13HOXB84668970846692301189
7rs720782617465006739.3E−13ATP5G14697014846973232469
8rs480807519173902914.9E−20SLC5A51798278218005983592
  1. Abbreviations: Chr=chromosome; SNP=single-nucleotide polymorphism.
  2. aShowing eight 2-megabase wide intervals containing a total of 15 genes from the PAX8 pathway and the index SNP (P<10−5) at the centre of each interval.
  3. bP-value for association with serous epithelial ovarian cancer susceptiblity in the combined study population.