The human CD81 (hCD81), the most recently proposed receptor of hepatitis C virus (HCV), can especifically bind to HCV envelope glycoprotein 2 (E2). In this study, hCD81-expressing murine NIH/3T3 cells were used to select hCD81-binding peptides from a phage displayed nonapeptide library (PVIII9aaCys). Eighteen of the 75 clones selected from the library showed specific binding to the hCD81-expressing NIH/3T3 cells by enzyme linked immunosorbent assay (ELISA) and competitive inhibition test. Twelve out of the 18 clones shared the amino acid motif SPQYWTGPA. Sequence comparison of the motif showed no amino acid homology with the native HCV E2. The motif-containing phages could competitively inhibit the ability of HCV E2 binding to native hCD81-expressing MOLT-4 cells, and induce HCV E2 specific immune response in vivo. These results suggest that the selected motif SPQYWTGPA should be a mimotope of HCV E2 to bind to hCD81 molecules. Our findings cast new light on developing HCV receptor antagonists.
Hepatitis C virus (HCV), a most common causative agent for post-transfusional hepatitis, is a positive-stranded RNA virus, classified as family Flavivirida1. Although the virus was identified more than a decade ago, some events in cell entry, replication and morphogenesis have not been well understood. It has been demonstrated that HCV envelope glycoprotein 2 (E2) could bind to host cells by interacting with the CD81 molecule 2. CD81 is a membrane protein of 26 000 KD, and with four transmembrane (TM) and two extracellular (EC) domains, it belongs to the tetraspanin superfamily3. The larger extracellular loop (LEL) of CD81 molecule contains four conservative cysteine residues forming two disulfide bounds that maintain natural configuration of the protein. CD81 is expressed on most human cells and is demonstrated to play a role in cell adhesion, proliferation, activation and differentiation4, 5, 6. Although the mechanism involving in the cell entry of HCV was not known clearly, human CD81 (hCD81) was considered as a putative HCV receptor7, 8, 9, 10. Because no effective chemical reagents are available for the prevention of HCV infection, a phage displayed peptide library was used in this study to identify small peptides which are able to selectively block the interaction between hCD81 and HCV E2.
The phage display technique has some advantages in the study of protein-protein interaction11, 12, 13. And lots of antagonists were identified from phage displayed peptide libraries, such as urokinase receptor antagonists and the human type I interleukin (IL)-1 receptor antagonist 14, 15, 16, 17. However, there are some difficulties for membrane receptors to be purified and maintain the natural conformation. It is better to use whole native cells or target receptor gene transfected cells to select the ligands18, 19. Whole cells usually maintain the native conformation of receptor with normal posttranslational modification, so so the ligands of receptor can be selected even without the information about the receptor.
In this study, hCD81-expressing murine NIH/3T3 cells were used to select hCD81-binding peptides from a phage peptide library. A small peptide specific for hCD81 was identified which is potential for development of HCV receptor antagonists.
MATERIALS AND METHODS
The murine fibroblast cell line NIH/3T3 (ATCC, Rockville, MD) were cotransfected with the eukaryotic expression vector pCDM8- hCD81 containing a full-length hCD81 cDNA (kindly provided by Dr. Levy S, Stanford University) and pSV2neo helper plasmid (ClonTech, Palo Alto, CA, USA) to obtain hCD81-expressing cells (NIH/3T3-hCD81)20. NIH/3T3-hCD81 and NIH/3T3 cells were cultured in RPMI-1640 medium supplemented with 10% (v/v) heatinactivated fetal bovine serum (FBS), 100 U/ml of penicillin and 100 mg/ml of streptomycin. Human acute lymphoblastic leukemia cell line MOLT-4 and human hepatocyte line HL-7702, expressing native hCD81 molecules on cell membrane and hCD81-deficient cell line, human histiocytic lymphoma cells U937, were cultured in Dulbecco?s modified Eagle?s medium (DMEM) supplemented with 15% (v/v) FBS, 100 U/ml of penicillin and 100 mg/ml of streptomycin. Medium and supplements, with the FBS, were all from GIBCOBRL, Gainthersburg, MD, USA.
Phage peptide library and bacterial strain
Phage peptide library (PVIII9aaCys) was composed of random circular nonamers, which were fused to the N terminus of the major coat protein PVIII displayed on filamentous phage f121. Host bacterial strain XL1-blue was from Stratagene Company, Cambridge, England.
Selection of phage peptide library with NIH/3T3 hCD81 cells
Selection proCedure was according to Pelsers and Souriau with some modifications22, 23. Briefly, phages of approximate 4×1010 phage transducting unit (TU) were preincubated for 1 h with bloCking -buffer (5 mg/ml bovine serum albumin (BSA), 0.1 mol/L NaHCO3) and then with 1×106 of wild type NIH/3T3 cells. After centrifugation at 10,000 rpm for 5 min at 4°C, the supernatant was transfered to a35 mM cell culture plate (Nunc, Roskilde, Denmark), on which 3.5×105NIH/3T3-hCD81 cells were grown, and incubated for 2 h. Unbound phage particles were removed by washing with 0.1%TBST (50 mMTris-HCl, pH 7.5, 150 mM NaCl, 0.1% Tween 20). Cell-bound phages were eluted with 100 mM Glycine-HCl (pH 2.2) for 10 min, and neutralized with 1 M Tris/HCl (pH 9.0). The eluted phages were replicated by infecting Escherichia coli XL1-blue cells, rescuing with M13KO7 helper phages (Pharmacia Biotech, Uppsala, Sweden). The amplified phage particles were purified using polyethyleneglycol (PEG)24, and then used for the subsequent round of selectio with NIH/3T3-hCD81 cells. Four rounds of selection were performed as above.
The exponentially growing NIH/3T3, NIH/3T3-hCD81 or MOLT- 4 cells were fixed on 96-well microtitration plates (Nunc, Roskilde, Denmark) (about 3×105 cells/well) with 1mg/ml of polylysine. Amplified phage clones were randomly picked after the fourth round of selection with the preincubation for 1 h with 3% BSA. About 2×1011 TU of phages were added to each well, and then incubated with the cells for 2 h at room temperature. The wells were washed extensively with 0.1% TBST and the amount of bound phages was detected with horseradish peroxidase (HRP)-conjugated anti-M13 phage antibody (Pharmacia Biotech, Uppsala, Sweden). The development was performed by the addition of 3, 3?, 5, 5?-tetramethylbenzidine (TMB) (Sigma, St. Louis, MO, USA), and read at 450 nm in an ELISA Reader (Bio Rad). Helper phage M13KO7 and original phage peptide library PVIII9aaCys were used as negative controls.
MOLT-4 cells were fixed about 3×105 cells per well on 96-well microtitration plates using polylysine. Anti-hCD81 monoclonal antibody (Pharmacia) and positive phage particles (5×1012 TU/ml) were mixed and then added to each well. After 1 h of incubation, the wells were washed with 0.1 % TBST, and incubated at 37°C for 1 h in the presence of HRP-conjugated anti-M13 phage antibody (1:5000 diluted). Finally, the wells were developed with substrate TMB, and read at 450 nm.
DNA phagemids were prepared from identified phage clones by standard method25 and sequenced with ABI Prism kit (Perkin Elmer Applied Biosystems, USA) automaticly. The primer used for sequencing is 5?-CCCACGCATAACCGATA-3?. Corresponding amino acid sequences were deduced from DNA sequences, and a multiple sequence alignmemt was done using BLAST software package provided by http://ncbi.nlm.nih.gov./BLAST/ to determine the groups of related peptides. Homologous analysis was performed to find an optimal alignment between the selected motifs and the primary sequence of HCV E2.
Specific analyses of positive phages binding to hCD81 protein
Competitive inhibition test
Native hCD81-expressing MOLT-4 cells were fixed on 96-well microtitration plates about 3×105 cells per well and blocked for 1 h with 3% BSA. HCV E2 antigen (kindly provided by Dr. Donnelly III JJ, Chiron Company, USA) and positive phages in serial dilutions were added to each well and incubated for 1 h at room temperature. After washing with 0.1% TBST, the cell-bound phages were detected with HRP-conjugated anti-M13 phage antibody (Pharmacia Biotech, Uppsala, Sweden). And the cell-bound HCV E2 was detected with mouse anti-HCV E2 mAb (kindly provided by Dr. Donnelly III JJ) and HRP-conjugated goat anti-mouse IgG (Sigma, St. Louis, MO, USA).
Exponentially growing MOLT-4, HL-7702 or U937 cells (about 3.5×105 cells per well) were cultured respectively with positive phage particles (about 1×1011 TU) for 2 h at room temperature. The cells were washed extensively with phosphate-buffered saline (PBS), swung onto the glass slides, and then fixed with acetone. The glass slides were incubated with HRP-conjugated anti-M13 phage antibody at 37°C for 1 h. After washed with PBS, the slides were developed with diaminobenzidine (DAB), counterstained lightly with hematine crystal, dehydrated through a graded series of ethanol to xylene, and coverslipped with permount.
Immunization of mice and ELISA
The purified positive phage particles were resuspended with 0.9% NaCl at a concentration of 1×1013 TU /ml. Four-to-six-week old female C57BL/6 mice (Experimental Animal Center, SMMU, China) were immunized by i. p. injection with 200 μl of positive phage emulsion (1:1 with complete Freund?s adjuvant). Same dosages with incomplete Freund?s adjuvant were used for the booster at weeks 4 and 7. The animals were bled for titer detection on the 10th day after second and third injections.
Microtitration plates were coated with 0.1 μg/well of HCV E2 and blocked with 3% BSA for 2 h at 4°C. 150 μl mouse serum of different dilutions was added to each well, and incubated for 1 h at 37°C. After washed with PBS, the cells were incubated with HRPconjugated goat anti-mouse IgG (Sigma) for 40 min at 37°C. The development was performed by addition of substrate TMB, and read at 450 nm. For competition assay, 150 μl of positive serum (diluted 1:100) from immunized mice were mixed with a graded series of HCV E2 antigen and added to HCV E2 coated microtitration plates. Normal mouse serum and equal volume of PBS were used as controls.
Specific enrichment of positive phages
In order to enrich hCD81-binding phages from the phage peptide library, four rounds of selection with NIH/ 3T3-hCD81 cells were performed. The enrichment was determined by the use of the output/input ratio of phages after each round of selection. The ratio increased about 8-fold (from 2.3×10−6 to 1.9×10−5) after the second round of selection. After the third and the fourth rounds of selection, the output/input ratio of phages increased about 290-fold and 4, 000 fold, respectively (Tab 1), which indicates an obvious enrichment for the specific binding of phages to hCD81-expressing cells.
Identification of the positive phages
75 clones were picked out from the sample after fourth round of selection, and the specificity was examined by whole-cell ELISA. Thirty of the 75 clones (40%) showed the binding ability to NIH/3T3-hCD81 cells and native hCD81-expressing MOLT-4 cells (data not shown). In contrast, the original phage library and helper M13KO7 phages cannot bind to the above 2 types of cells. Competitive inhibition test further demonstrated that 18 out of the 30 positive clones could specifically inhibit the binding of anti-hCD81 MAb to MOLT-4 cells. Mean inhibition ratio of the 18 clones was 70% (Fig 1).
Analyses of exogenous sequences of positive phage clones
The exogenous DNA sequences of 18 positive phage clones were determined by DNA sequencing. The deduced peptide sequences from DNA sequences were shown in Tab 2. Of the 18 clones, 12 shared the motif SPQYWTGPA. The motif did not show any homology to HCV E2, which implied that the motif should be a mimic sequence of HCV E2 able to bind to hCD81 molecules on cell membrane.
The motif-containing phages specific to hCD81 on cell membrane
The interaction of the motif-containing phages and several human cell samples was detected by immunohistochemistry staining. Positive phages showed binding to MOLT-4 cells (Fig 2A) and HL-7702 cells (Fig 2B), and dark brown positive staining was seen with phage antibodies on the surfaces of these cells. In contrast, no positive staining was observed on the hCD81-deficient U937 cells (Fig 2C). Primary phage peptide library without selection was used as negative control, while, no positive staining was observed on the surfaces of MOLT- 4 cells (Fig 2D), HL-7702 cells (Fig 2E) and U937 cells (Fig 2F).
The ability of the motif-containing phages to block the binding of the hCD81-expressing cells with HCV E2 was determined by competitive ELISA. The phage clone C25, with the highest (81%) effect to block the binding of antihCD81 MAb to MOLT-4 cells, was chosen for the test. It was found that the binding ability of the clone C25 with MOLT-4 cells increased with the increasing amount of the phages. However, the binding of the phages with MOLT-4 cells decreased significantly in the presence of HCV E2 (2 mg/ml). Similarly, the binding of HCV E2 to MOLT-4 cells was inhibited by the motif-containing phages in a dose-dependent manner too (Fig 3).
Immunogenic mimicry of HCV E2 epitope
The motif-containing phages were used for the immunization of C57BL/6 mice. Ten days after the third immunization, the mouse sera were collected and analyzed by titer detection. The sera could react with HCV E2. Furthermore, the reaction of HCV E2 with the sera decreased significantly in the presence of HCV E2 antigen (Fig 4).
It has been proved that the phenylalanine (Phe) at amino acid (aa) 186 of hCD81 large extracellular loop plays a key role in recognition for CD81 binding to HCV E2. Binding site of HCV E2 for hCD81 is a conformational structure naturally involving aa 480 to 493 and 544 to 551 within the E2 protein3, 7, 26. Thus it is difficult for a linear peptide library to mimic the discontinuous epitopes of HCV E2 protein. In this work, a conformational constrained peptide library was used, in which each end of the exogenous random nonapeptides is linked with one cystein residue, so circular disulfide-bonded constrained conformation can be formed in the peptide library. It has been reported that the phage displayed constrained library has high affinity with receptor and is easy to be selected for functional peptides or structural mimetics of proteins16, 27, 28. Wrighton and colleagues have obtained the ligands of erythropoietin (EPO) receptor from this kind of phage random circular octapeptide library29. However, some cell membrane receptors such as CD81 are rarely used possibly because it is difficult for them to maintain the natural conformation or topostructure. Therefore, we established an hCD81-expressing NIH/3T3 cell line for the selection of hCD81- binding peptides from the phage peptide library. The major problem existed in cell-based selection is that phage displayed peptides can bind to the modified cells nonspecifically. In order to overcome the problem, multirounds of selection were carried out in our experiment according to Smith?s method30. In addition, before each round of selection, wild type hCD81-deficient NIH/ 3T3 cells were used for preincubation with the library in order to remove the non-specific phages. Specific phages for binding to hCD81- expressing cells were obtained from the phage peptide library and further enriched round by round.
The phage clones were further identified after the fourth round of selection by whole-cell ELISA and competitive inhibition test. The binding activity between 18 positive clones and hCD81-expressing MOLT-4 cells could be inhibited by the anti-hCD81 MAb. It has been proved that the MAb used in this study can block the site of HCV E2 binding to hCD812, thus indicating these 18 clones should be of the same determinant as HCV E2. Although the DNA sequences of these 18 clones were not identical, 12 out of the phage clones displayed the amino acid motif SPQYWTGPA. The motif did not show any homology to the primary sequence of native HCV E2 as we had expected. However, the immunohistochemistry staining showed that the motif-containing phages could bind to MOLT-4 and HL-7702 cells, both of which express native hCD81, but do not bind to hCD81-deficient U937 cells. Furthermore, the motif-containing phages could inhibit the ability of HCV E2 binding to MOLT-4 cells in a competitive manner. These results demonstrate that the selected motif SPQYWTGPA should be a mimotope of HCV E2 to bind to hCD81 molecules.
If the motif displayed on the selected phages mimics HCV E2 epitope, it should be immunogenic mimics of the natural antigen. To verify this inference, the purified motif-containing phage particles were used as antigen to immunize C57BL/6 mice. Compared with the control, the immunized mice showed an obvious humoral immune response against HCV E2 antigen. The specificity of the response was further identified by a competition assay, and the results showed that the reaction of the phages with the mouse serum was significantly inhibited in the presence of HCV E2. These results suggest that the motif SPQYWTGPA might mimic the structural epitope of HCV E2 and provide the potential for further development of HCV receptor antagonists.
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We thank Dr. Monaci P (Istituto di Ricerche di Biologia Molecolare P. Angeletti SPA, Rome, Italy) for kindly providing the phage-displayed circular nonapeptide library and Dr. Donnelly III. JJ (Chiron Company, USA) for HCV E2 protein and anti-HCV E2 MAb.
This work was financially supported by research grants from the National Natural Science Foundation of China (No. 30271187) and the Shanghai Science and Technology Development Foundation (No. 02DJ14015).
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CAO, J., ZHAO, P., MIAO, X. et al. Phage display selection on whole cells yields a small peptide specific for HCV receptor human CD81. Cell Res 13, 473–479 (2003). https://doi.org/10.1038/sj.cr.7290190
- viral receptor
- hepatitis C virus
- cell-based selection
- hCD81-binding peptide
- phage display
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