Table 1 Expression of human endogenous retrovirus-E transcript sequences in humans

From: Characterization of the human CD5 endogenous retrovirus-E in B lymphocytes

Genomic cDNA/EST Fusion transcript Expression Chr. LTR Size (bp) Type
M10976 Retrovirus (4-1): M74509a   MO, epithelial carcinoma 19p13.1 LTR2C 8806 C
AL590064 BG957004a   Colon 13q14.11 LTR2C 7197 C
AC021736/AC022784 BQ422965 HERV-E.FLJ31301 Melanoma 8p23.1 LTR2C 1462 LTR
  BE389761 HERV-E.unknown Adenocarcinoma     
AC011481 BC055093 HERV-E.ApoC1 Liver, L 19q13.32 LTR2 987 LTR
  BP304001 (two variants) Macrophage     
AC010645 BX951758 HERV-E.unknown Unknown 19q13.43 LTR2 1185 LTR
AP000437/AC003678 AY541704 HERV-E.CD5 BL 11q12.2 LTR2 5254 D
AC004691/AC006022 AL524147 HERV-E.FLJ22374 Neuroblastoma 7p14.3 LTR2 4468 R2
  CB269454a   Adipose     
AC060780 AW405133; BG255379 HERV-E.FLJ36232 LTR7 BL, adenocarcinoma, thymus, neuroblastoma 17q21.31 LTR2 7437 R1
  BQ883435a       
AC073062/ BX395331 HERV-E.SINE Neuroblastoma 2p24.3 LTR2 7682 R1
AC104774 BX445808, BX425704 HERV-E.HERV-L RT Thymus, neuroblastoma     
  BX386884a   Neuroblastoma     
AC092032 BF762816a   Colon 7p22.1 LTR2 7862 R1
AL139002 CB994808 HERV-E.EDNRB Placenta 13q22.3 LTR2 5777 R1
AC117406 AY112902 HERV-E.MID1 Placenta, fetal kidney Xp22.22 LTR2B 5547 R1
  CB994213a   Placenta     
AC01872/AF058907 AF058907 HERV-E.PTN Placenta 7q33 LTR2B 6360 R1
Z97876/AL031287 AL541192 HERV-E.PC326 Placenta 1q24.2 LTR2B 6832 R1
AP000509 BG540114a   Lung 6p21.33 LTR2B 4871 R1
BX571818 AK122631, AA291819 HERV-E.FLJ16052 Kidney, ovary 1q24.3 LTR2B 6255 R1
  BF034544 HERV-E.unknown Ovary     
AC010378 AL709881 HERV-E.UB2D2 Unknown 5q31.2 LTR2B 5644 R1
  AL709716a   Unknown     
AL591002 AL049113a   Testis 6p21.31 LTR2B 5818 R1
AC073218 CB216654 HERV-E.unknown Uterus 2p22.3 LTR2B 708 LTR
  1. aNo fusion. C, complete retrovirus; LTR, solitary long terminal repeat; D, internal deleted provirus; R, internal deleted and recombinated provirus type 1 (R1) and type 2 (R2) (see Figure 3); MO, monocyte; L, lymphocyte; BL, B lymphocyte; Chr, chromosome.